Search results for "Clad"
showing 10 items of 495 documents
A New Phylogenetic Framework for the Animal-adaptedMycobacterium tuberculosisComplex
2018
Tuberculosis (TB) affects humans and other animals and is caused by bacteria from the Mycobacterium tuberculosis complex (MTBC). Previous studies have shown that there are at least nine members of the MTBC infecting animals other than humans; these have also been referred to as ecotypes. However, the ecology and the evolution of these animal-adapted MTBC ecotypes are poorly understood. Here we screened 12,886 publicly available MTBC genomes and newly sequenced 17 animal-adapted MTBC strains, gathering a total of 529 genomes of animal-adapted MTBC strains. Phylogenomic and comparative analyses confirm that the animal-adapted MTBC members are paraphyletic with some members more closely relate…
Effects of the filter-feeding benthic bivalve corbicula fluminea on plankton community and water quality in aquatic ecosystems: A mesocosm study
2021
The influence of filter-feeding bivalves on plankton communities, nutrients, and water quality in a given aquatic ecosystem is so profound that they can be considered ecosystem engineers. In a 70-day mesocosm experiment, we tested the hypothesis that Corbicula fluminea would change plankton community structure by reducing small zooplankton and large phytoplankton and improve water quality by reducing nutrients. We monitored levels of nitrogen and phosphorus, organic suspended solids (OSS), and light at the sediment surface. Within the plankton, phytoplankton biomass (as Chl a, >
Crocidura cossyrensis Contoli, 1989 (Mammalia, Soricidae): karyotype, biochemical genetics and hybridization experiments
2004
The shrew Crocidura cossyrensis Contoli, 1989 from Pantelleria (I), a Mediterranean island 100 km south of Sicily and 70 km west from Tunisia, was investigated in order to understand its origin and its relationship with C. russula from Tunisia, Morocco and Switzerland. With the exception of a single heterozygote centric fusion, C. cossyrensis had a karyotype identical with that of C. russula from Tunisia (2N = 42, NF = 70 to 72), but it differed from C. russula from Morocco and Switzerland (2N = 42, NF = 60). The former have 5-6 pairs of chromosomes with small arms that are acrocentric in the latter. Genetic comparisons with allozyme data revealed small genetic distance (0.04) between C. co…
Invasions of the non-indigenous red alga Lophocladia lallemandii (Montagne) F. Schmitz off the Island of Ischia (Tyrrhenian Sea, Italy)
2021
This paper describes the distribution and spread of the non-indigenous red alga Lophocladia lallemandii (Montagne) F. Schmitz along the coast of the Island of Ischia (Tyrrhenian Sea, Italy). Lophocladia lallemandii was monitored through surveys from July 2019 to January 2020 at the Capo Sant’Angelo (Ischia), where L. lallemandii was observed, but not reported, in the years preceding the invasion of the upper rocky infralittoral shore reported here. It is noteworthy that a large portion of the study area is included within one of the two “B no-take” zones of the Marine Protected Area of the “Regno di Nettuno” (“Neptune’s Realm”). During the surveys, the alga was first observed in the middle …
Observation of induced modulational polarization instabilities and pulse-train generation in the normal-dispersion regime of a birefringent optical f…
1998
Four-photon mixing in a low-birefringence fiber is strongly influenced by the orientation of the pump and signal waves with respect to the fiber axes. We experimentally investigated the dependence of the modulational gain spectra on pump power and polarization by mixing orthogonal pump and probe light beams in a birefringent optical fiber. With a pump on the fast fiber axis, a cascade of sidebands was generated in the regime of normal fiber dispersion. These sidebands are shown to correspond to 0.2–0.3-THz trains of pulses with complex polarization profiles. The analysis reveals that, at particular values of the input pump and probe powers and signal frequency detuning, trains of dark-solit…
Optical frequency domain reflectometer distributed sensing using microstructured pure silica optical fibers under radiations
2016
International audience; We investigated the capability of micro-structured optical fibers to develop multi-functional, remotely-controlled, Optical Frequency Domain Reflectometry (OFDR) distributed fiber based sensors to monitor temperature in nuclear power plants or high energy physics facilities. As pure-silica-core fibers are amongst the most radiation resistant waveguides, we characterized the response of two fibers with the same microstructure, one possessing a core elaborated with F300 Heraeus rod representing the state-of-the art for such fiber technology and one innovative sample based on pure sol-gel silica. Our measurements reveal that the Xray radiations do not affect the capaci…
Dynamics and molecular evolution of HIV-1 strains in Sicily among antiretroviral naïve patients.
2012
Abstract HIV-1 subtype B is the most frequent strain in Sicily. To date, there is no available data about the genetic diversity of HIV-1 viral strains circulating in Sicily among antiretroviral (ARV) naive subjects and the role of immigration as potential determinant of evolutionary dynamics of HIV-1 molecular epidemiology. For this purpose, HIV-1 polymerase (pol) sequences obtained from 155 ARV naive individuals from 2004 to 2009 were phylogenetically analysed. The overall rate of HIV-1 non-B infections was 31.0% (n = 48/155), increasing from 7.8% in 2004–2006 to 40.9% in 2009, and about one-third were identified as unique recombinant forms. CRF02_AG was the prevalent non-B clade (n = 28/4…
Modificētus mālus saturošu materiālu antimikrobiālā iedarbība
2017
Mikroorganismu attīstība uz dažādiem materiāliem izsenis ir ietekmējusi cilvēka dzīves kvalitāti. Vieni no biežāk būvmateriālos sastopamajiem mikroorganismiem ir sēnes. Pētījuma mērķis bija noskaidrot modificēta māla un tā piedevu ietekmi uz mikroskopisko sēņu attīstību uz dažādiem būvniecības materiāliem. Pētīti 12 ar dažādu metālu joniem modificētu māla pulvera paraugu, kas 0,2% un 2% koncentrācijas iestrādāti iesala agara barotnēs, ietekme uz Cladosporium herbarum un Alternaria alternata augšanu. Tika pētīta sēņu attīstība uz dažāda veida krāsām, ar lineļļu apstrādātiem kokmateriāliem un saplākšņa materiāliem. Ietekme tika novērota sešiem no divpadsmit māla pulvera paraugiem Alternaria a…
Fiber Characterization Using Whispering Gallery Modes(Invited)
2019
Fiber whispering gallery modes (WGMs) are surface waves that propagate azimuthally along the outer surface of the fiber cladding. Those waves that are in phase every turn give rise to narrow resonances defined by the resonant wavelength and a high Q factor. The actual values of the resonant wavelengths depend on the radius and the refractive index of the fiber cladding, enabling the development of several fiber characterization techniques. In addition, the typical high Q factor of these resonances (Q > 106) provides the characterization techniques with a low detection limit. Here, we report the development of a technique for measuring temperature profiles along the optical fiber, which enab…
Cyclic AMP-mediated upregulation of the expression of neuronal NO synthase in human A673 neuroepithelioma cells results in a decrease in the level of…
2004
The expression level of neuronal nitric oxide synthase (nNOS) can vary depending on the (patho)physiological conditions. Here we document a marked induction of nNOS mRNA, protein, and total NO production in response to dibutyryl cyclic AMP (db-cAMP) in human A673 neuroepithelial cells. However, the upregulation of nNOS was associated with a decreased level of production of bioactive NO and by an increase in the level of generation of reactive oxygen species (ROS). ROS production could be prevented by the NOS inhibitor L-NAME, suggesting nNOS itself is involved in ROS generation. Sepiapterin supplementation of db-cAMP-treated A673 cells could restore full bioactive NO production, most likely…