Search results for "Cluster"

showing 10 items of 3640 documents

Seismic sources and stress transfer interaction among axial normal faults and external thrust fronts in the Northern Apennines (Italy): A working hyp…

2016

In this study we analyse the main potential seismic sources in some axial and frontal sectors of the Northern Apennines, in Italy. This region was hit by a peculiar series of earthquakes that started in 1916 on the external thrust fronts near Rimini. Later, in 1917-1921, seismicity (up to Mw approximate to 6.5) shifted into the axial zone and clearly migrated north-westward, along the belt of active normal faults. The collection of fault-slip data focused on the active normal faults potentially involved in this earthquake series. The acquired data allowed us to better characterize the geometry and kinematics of the faults. In a few instances, the installation of local seismic networks durin…

010504 meteorology & atmospheric sciencesMagnitude (mathematics)ThrustInduced seismicity010502 geochemistry & geophysicsCluster (spacecraft)01 natural sciencesStress changeStress (mechanics)1916-1920 earthquake cluster0105 earth and related environmental sciencesEarth-Surface ProcessesSeismotectonicsStatic stress transferExternal thrust frontsAxial normal faultSeismic sourcesNorthern ApennineGeophysicsTime space1916–1920 earthquake clusterExternal thrust frontAxial normal faultsSeismic sourceSeismologyGeologyTectonophysics
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Massive Oe/Be stars at low metallicity: Candidate progenitors of long GRBs?

2010

At low metallicity the B-type stars rotate faster than at higher metallicity, typically in the SMC. As a consequence, it was expected a larger number of fast rotators in the SMC than in the Galaxy, in particular more Be/Oe stars. With the ESO-WFI in its slitless mode, the SMC open clusters were examined and an occurence of Be stars 3 to 5 times larger than in the Galaxy was found. The evolution of the angular rotational velocity seems to be the main key on the understanding of the specific behaviour and of the stellar evolution of such stars at different metallicities. With the results of this WFI study and using observational clues on the SMC WR stars and massive stars, as well as the theo…

010504 meteorology & atmospheric sciencesMetallicityAstrophysics::High Energy Astrophysical PhenomenaFOS: Physical sciencesAstrophysicsAstrophysics::Cosmology and Extragalactic Astrophysics01 natural sciencesstars: rotation0103 physical sciencesMagellanic CloudsAstrophysics::Solar and Stellar Astrophysics010303 astronomy & astrophysicsStellar evolutionSolar and Stellar Astrophysics (astro-ph.SR)Astrophysics::Galaxy Astrophysics0105 earth and related environmental sciencesPhysics[SDU.ASTR.SR]Sciences of the Universe [physics]/Astrophysics [astro-ph]/Solar and Stellar Astrophysics [astro-ph.SR]Astronomy and Astrophysicsgamma rays: general[PHYS.ASTR.SR]Physics [physics]/Astrophysics [astro-ph]/Solar and Stellar Astrophysics [astro-ph.SR]GalaxyStarsAstrophysics - Solar and Stellar AstrophysicsSpace and Planetary Sciencestars: supernovae: generalAstrophysics::Earth and Planetary AstrophysicsOpen cluster
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New Pre-Main Sequence Candidates in the Taurus-Auriga Star Forming Region

2007

Aims. We have studied the X-ray source population of the Taurus Molecular Cloud (TMC) to search for new members of the Taurus-Auriga star forming region. Methods. Candidate members have been selected among the X-ray sources detected in 24 fields of the XMM-Newton Extended Survey of the Taurus Molecular Cloud, having an IR counterpart in the 2MASS catalog, based on color-magnitude and color-color diagrams. Their X-ray spectral properties have been compared with those of known members and other X-ray sources in the same fields but without a NIR counterpart. A search for flare-like variability in the time series of all new candidates and the analysis of the X-ray spectra of the brightest candi…

010504 meteorology & atmospheric sciencesStellar massAstrophysics::High Energy Astrophysical PhenomenaAstrophysicsAstrophysics::Cosmology and Extragalactic AstrophysicsGalaxy : open clusters and associations : individual : Taurus Molecular Cloud01 natural sciences[PHYS.ASTR.CO]Physics [physics]/Astrophysics [astro-ph]/Cosmology and Extra-Galactic Astrophysics [astro-ph.CO]stars : activitystars : pre-main-sequence0103 physical sciencesstars : luminosity function mass functionAstrophysics::Solar and Stellar Astrophysics010303 astronomy & astrophysicsLuminosity functionAstrophysics::Galaxy Astrophysics0105 earth and related environmental sciencesPhysicsAURIGAMolecular cloudAstronomyAstronomy and AstrophysicsLight curveStarsStar clusterSpace and Planetary Science[PHYS.ASTR.CO] Physics [physics]/Astrophysics [astro-ph]/Cosmology and Extra-Galactic Astrophysics [astro-ph.CO]X-rays : starAstrophysics::Earth and Planetary Astrophysicsstars : coronaeOpen cluster
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High-resolution spectroscopy and analysis of the V2 + V3 combination band of SF6 in a supersonic jet expansion

2013

International audience; Sulphur hexafluoride is a very strong greenhouse gas whose concentration is increasing in the atmosphere. It is detected through infrared absorption spectroscopy in the strong ν3 fundamental region. Due to the existence of low-lying vibrational states of this molecule, however, many hot bands arise at room temperature and those are still not known. We present here a contribution to the elucidation of this hot band structure, by analysing the ν2 + ν3 combination band. We use a supersonic jet expansion high-resolution spectrum at a rotational temperature of ca. 25 K that was recorded thanks to the Jet-AILES setup at the Source Optimisée de Lumière d'Energie Intermédiai…

010504 meteorology & atmospheric sciencessupersonic jet expansionBiophysicsInfrared spectroscopy7. Clean energy01 natural sciencesHot bandlaw.inventionsymbols.namesake[PHYS.QPHY]Physics [physics]/Quantum Physics [quant-ph]law0103 physical sciencesSupersonic speedPhysical and Theoretical ChemistrySpectroscopy[ PHYS.PHYS.PHYS-ATM-PH ] Physics [physics]/Physics [physics]/Atomic and Molecular Clusters [physics.atm-clus]Molecular BiologyComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences[PHYS.PHYS.PHYS-AO-PH]Physics [physics]/Physics [physics]/Atmospheric and Oceanic Physics [physics.ao-ph]010304 chemical physicssulphur hexafluorideChemistry[PHYS.PHYS.PHYS-ATM-PH]Physics [physics]/Physics [physics]/Atomic and Molecular Clusters [physics.atm-clus]Rotational temperatureRotational–vibrational spectroscopyCondensed Matter PhysicsSynchrotron[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry[ PHYS.PHYS.PHYS-CHEM-PH ] Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]13. Climate actiongreenhouse gassymbolsinfrared absorption[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]Atomic physicsHamiltonian (quantum mechanics)tensorial formalism
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Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

2018

International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesPlant SciencePlant Genetics01 natural sciencesGenomeCoffeeDatabase and Informatics MethodsPlant GenomicsPlastidsPhylogenyData Management2. Zero hungerPlant evolutionMultidisciplinarybiologyPhylogenetic treeQRfood and beveragesPhylogenetic AnalysisGenome projectGenomicsPhylogenetics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]MedicineEngineering and Technology[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Cellular Structures and OrganellesCellular TypesSequence AnalysisResearch ArticleBiotechnologyComputer and Information SciencesBioinformaticsSciencePlant Cell BiologyBioengineering[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Coffea canephoraGenes PlantResearch and Analysis Methods010603 evolutionary biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]03 medical and health sciencesPhylogeneticsChloroplast GenomePlant CellsGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyEvolutionary BiologyCoffea arabicaCoffeafungiBiology and Life SciencesComputational BiologyMolecular Sequence AnnotationSequence Analysis DNACell Biology15. Life on landbiology.organism_classificationGenome Analysis[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationGenome Annotation030104 developmental biologyEvolutionary biology[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Plant BiotechnologySequence AlignmentPloS one
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Gene expression patterns underlying parasite-induced alterations in host behaviour and life history

2015

Many parasites manipulate their hosts' phenotype. In particular, parasites with complex life cycles take control of their intermediate hosts' behaviour and life history to increase transmission to their definitive host. The proximate mechanisms underlying these parasite-induced alterations are poorly understood. The cestode Anomotaenia brevis affects the behaviour, life history and morphology of parasitized Temnothorax nylanderi ants and indirectly of their unparasitized nestmates. To gain insights on how parasites alter host phenotypes, we contrast brain gene expression patterns of T. nylanderi workers parasitized with the cestode, their unparasitized nestmates and unparasitized workers fr…

0106 biological sciences0301 basic medicineTemnothorax nylanderimedia_common.quotation_subjectLongevityved/biology.organism_classification_rank.speciesCestodaGenes InsectBiology010603 evolutionary biology01 natural sciencesHost-Parasite InteractionsTranscriptome03 medical and health sciencesGeneticsAnimalsCluster AnalysisParasite hostingGeneEcology Evolution Behavior and Systematicsmedia_commonGeneticsBehavior AnimalAntsved/biologyHost (biology)Longevitybiology.organism_classificationPhenotypePhenotype030104 developmental biologyCestodaTranscriptomeMolecular Ecology
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Hierarchical networks of food exchange in the black garden ant Lasius niger

2020

In most eusocial insects, the division of labour results in relatively few individuals foraging for the entire colony. Thus, the survival of the colony depends on its efficiency in meeting the nutritional needs of all its members. Here, we characterise the network topology of a eusocial insect to understand the role and centrality of each caste in this network during the process of food dissemination. We constructed trophallaxis networks from 34 food-exchange experiments in black garden ants (Lasius niger). We tested the influence of brood and colony size on (i) global indices at the network level (i.e. efficiency, resilience, centralisation and modularity) and (ii) individual values (i.e. …

0106 biological sciences0301 basic medicinesocial network analysisModularity (biology)Foragingself-organisationsocial network analysesEvolution des espèces01 natural sciencesPhysiologie des invertébrésGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesSciences du Vivant [q-bio]/Autre [q-bio.OT]Betweenness centralityBlack garden antAnimalsinsectsSocial Behaviorsocial evolutionEcology Evolution Behavior and Systematicsnetwork evolutionPrincipal Component AnalysisBehavior AnimalbiologyAntsEthologieEcologyLasiusFeeding Behaviorbiology.organism_classificationEusociality010602 entomology030104 developmental biologySpace-Time ClusteringInsect Science[SDE]Environmental SciencesCentralityBiologieAgronomy and Crop ScienceSocial Network AnalysisTrophallaxis
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How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)

2022

Analysing multiple genomic regions while incorporating detection and qualification of discordance among regions has become standard for understanding phylogenetic relationships. In plants, which usually have comparatively large genomes, this is feasible by the combination of reduced-representation library (RRL) methods and high-throughput sequencing enabling the cost effective acquisition of genomic data for thousands of loci from hundreds of samples. One popular RRL method is RADseq. A major disadvantage of established RADseq approaches is the rather short fragment and sequencing range, leading to loci of little individual phylogenetic information. This issue hampers the application of coa…

0106 biological sciences570clustering threshold selectionInferenceLocus (genetics)Computational biologyBiologyCrassulaceaedata bias010603 evolutionary biology01 natural sciencesGenomeCoalescent theoryspecies tree inference03 medical and health scienceslocus filteringGeneticscoalescent-based summary methodCluster analysisMolecular BiologyEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Phylogeny030304 developmental biology0303 health sciencesGenomePhylogenetic treeHigh-Throughput Nucleotide SequencingGenomicsRADseq500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; BiologieTree (data structure)
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Fuzzy quantification of common and rare species in ecological communities (FuzzyQ)

2021

International audience; Most species in ecological communities are rare, whereas only a few are common. This distributional paradox has intrigued ecologists for decades but the interpretation of species abundance distributions remains elusive.We present Fuzzy Quantification of Common and Rare Species in Ecological Communities (FuzzyQ) as an R package. FuzzyQ shifts the focus from the prevailing species-categorization approach to develop a quantitative framework that seeks to place each species along a rarity-commonness gradient. Given a community surveyed over a number of sites, quadrats, or any other convenient sampling unit, FuzzyQ uses a fuzzy clustering algorithm that estimates a probab…

0106 biological sciencesAssembly rulesFuzzy clustering[SDV]Life Sciences [q-bio]Rare species010603 evolutionary biology01 natural sciencesFuzzy logic03 medical and health sciencesEnvironmental monitoringrarityEcology Evolution Behavior and Systematics030304 developmental biologyenvironmental monitoring0303 health sciencesCommunitybusiness.industryEcological ModelingEnvironmental resource managementassembly rulescommonness15. Life on landGeographyfuzzy clustering[SDE.BE]Environmental Sciences/Biodiversity and Ecologybusinessabundance–occupancy distributionscommunity ecology
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gllvm: Fast analysis of multivariate abundance data with generalized linear latent variable models inr

2019

The work of J.N. was supported by the Wihuri Foundation. The work of S.T. was supported by the CRoNoS COST Action IC1408.F.K.C.H. was also supported by an ANU cross disciplinary grant.

0106 biological sciencesClustering high-dimensional dataMultivariate statisticsMultivariate analysisCross disciplinary010604 marine biology & hydrobiologyEcological ModelingMaximum likelihoodLatent variable010603 evolutionary biology01 natural sciencesAbundance (ecology)StatisticsCost actionEcology Evolution Behavior and SystematicsMathematicsMethods in Ecology and Evolution
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