Search results for "Collinearity"

showing 10 items of 20 documents

LEGO-based generalized set of two linear algebraic 3D bio-macro-molecular descriptors: Theory and validation by QSARs

2019

Abstract Novel 3D protein descriptors based on bilinear, quadratic and linear algebraic maps in R n are proposed. The latter employs the kth 2-tuple (dis) similarity matrix to codify information related to covalent and non-covalent interactions in these biopolymers. The calculation of the inter-amino acid distances is generalized by using several dis-similarity coefficients, where normalization procedures based on the simple stochastic and mutual probability schemes are applied. A new local-fragment approach based on amino acid-types and amino acid-groups is proposed to characterize regions of interest in proteins. Topological and geometric macromolecular cutoffs are defined using local and…

0301 basic medicineStatistics and ProbabilityNormalization (statistics)GeneralizationQuantitative Structure-Activity RelationshipGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences0302 clinical medicineLinear regressionAmino AcidsMathematicsGeneral Immunology and MicrobiologyApplied MathematicsStatistical parameterProteinsGeneral MedicineCollinearityStructural Classification of Proteins databaseSupport vector machine030104 developmental biologyModeling and SimulationTest setLinear ModelsGeneral Agricultural and Biological SciencesAlgorithmSoftware030217 neurology & neurosurgeryJournal of Theoretical Biology
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Investigation of the consequences of the modifiable areal unit problem in macroscopic traffic safety analysis: A case study accounting for scale and …

2019

Abstract Traffic safety analysis at the macroscopic level usually relies on previously defined areal traffic analysis zones (TAZs) that are used as the units of investigation. Hence, statistical inference is made on the basis of such units, implying that the consideration of a certain TAZ configuration may influence the results and conclusions achieved. Regarding this, the modifiable areal unit problem (MAUP) is a well-known issue in the field of spatial statistics, which refers to the effects that arise in statistical properties and estimations when there is a change in areal units of analysis. In this paper, the consequences of MAUP have been investigated through a dataset of traffic cras…

050210 logistics & transportationSpatial AnalysisModels StatisticalComputer science05 social sciencesPublic Health Environmental and Occupational HealthAccidents TrafficPoison controlHuman Factors and ErgonomicsStatistical modelModifiable areal unit problemMulticollinearitySpain0502 economics and businessStatisticsCovariateStatistical inferenceHumans0501 psychology and cognitive sciencesCity PlanningSafetySafety Risk Reliability and QualityScale (map)Spatial analysis050107 human factorsAccident; analysis and prevention
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The linear absorbances method adapted to systems with two interfering compounds

1993

The paper exposes the theoretical and experimental study performed with the purpose to extend the application of the Linear Absorbances Method to more complex systems, which present two spectral interferences. The curves of collinearity are developed and a theoretical study of them is carried out. The theoretical equations developed are experimentally tested and the influence of the variables involved in the Linear Absorbance Method is studied, too. It is concluded that the use of couples of collinear wavelengths of the interferents allows to obtain the concentration of a compound in the presence of two interfering substances.

AbsorbanceMaterials scienceComplex systemLinearityCollinearityBiological systemBiochemistryAnalytical ChemistryFresenius' Journal of Analytical Chemistry
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Mapping landscape canopy nitrogen content from space using PRISMA data

2021

Abstract Satellite imaging spectroscopy for terrestrial applications is reaching maturity with recently launched and upcoming science-driven missions, e.g. PRecursore IperSpettrale della Missione Applicativa (PRISMA) and Environmental Mapping and Analysis Program (EnMAP), respectively. Moreover, the high-priority mission candidate Copernicus Hyperspectral Imaging Mission for the Environment (CHIME) is expected to globally provide routine hyperspectral observations to support new and enhanced services for, among others, sustainable agricultural and biodiversity management. Thanks to the provision of contiguous visible-to-shortwave infrared spectral data, hyperspectral missions open enhanced …

Active learningActive learning (machine learning)Computer scienceDimensionality reductionHyperspectral imagingPRISMAContext (language use)CollinearityHybrid retrievalDimensionality reductionImaging spectroscopyAtomic and Molecular Physics and OpticsComputer Science ApplicationsImaging spectroscopyCHIMEKrigingEnMAPCanopy nitrogen contentComputers in Earth SciencesEngineering (miscellaneous)Gaussian process regressionRemote sensingISPRS Journal of Photogrammetry and Remote Sensing
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In silico prediction of central nervous system activity of compounds. Identification of potential pharmacophores by the TOPS–MODE approach

2004

The central nervous system (CNS) activity has been investigated by using a topological substructural molecular approach (TOPS-MODE). A discriminant analysis to classify CNS and non-CNS drugs was developed on a data set (302 compounds) of great structural variability where more than 81% (247/302) were well classified. Randic's orthogonalization procedures was carried out to allow the interpretation of the model and to avoid the collinearity among descriptors. The discriminant model was assessed by a leave-n-out (when n varies from 2 to 20) cross-validation procedure (79.94% of correct classification), an external prediction set composed by 78 CNS/non-CNS drugs (80.77% of correct classificati…

Central Nervous SystemMolecular modelChemistryStereochemistryIn silicoOrganic ChemistryClinical BiochemistryPharmaceutical ScienceCollinearityComputational biologyLinear discriminant analysisModels BiologicalBiochemistryCross-validationPolar surface areaStructure-Activity RelationshipPredictive Value of TestsDrug DiscoveryMolecular MedicinePharmacophoreMolecular BiologyOrthogonalizationCentral Nervous System AgentsBioorganic & Medicinal Chemistry
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Estimation of brain connectivity through Artificial Neural Networks

2019

Among different methods available for estimating brain connectivity from electroencephalographic signals (EEG), those based on MVAR models have proved to be flexible and accurate. They rely on the solution of linear equations that can be pursued through artificial neural networks (ANNs) used as MVAR model. However, when few data samples are available, there is a lack of accuracy in estimating MVAR parameters due to the collinearity between regressors. Moreover, the assessment procedure is also affected by the lack of data points. The mathematical solution to these problems is represented by penalized regression methods based on l 1 norm, that can reduce collinearity by means of variable sel…

Computer scienceFeature selection02 engineering and technologyConnectivity measurements03 medical and health sciences0302 clinical medicine0202 electrical engineering electronic engineering information engineeringArtificial neural networkbusiness.industryProcess (computing)BrainPattern recognitionElectroencephalographyCollinearityCausalityData pointCausality; Connectivity measurements; Physiological systems modeling - Multivariate signal processingNorm (mathematics)Physiological systems modeling - Multivariate signal processingRegression Analysis020201 artificial intelligence & image processingAnalysis of varianceArtificial intelligenceNeural Networks ComputerbusinessAlgorithms Brain Electroencephalography Regression Analysis Neural Networks Computer030217 neurology & neurosurgeryLinear equationAlgorithms
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Quantifying Vegetation Biophysical Variables from Imaging Spectroscopy Data: A Review on Retrieval Methods

2019

An unprecedented spectroscopic data stream will soon become available with forthcoming Earth-observing satellite missions equipped with imaging spectroradiometers. This data stream will open up a vast array of opportunities to quantify a diversity of biochemical and structural vegetation properties. The processing requirements for such large data streams require reliable retrieval techniques enabling the spatiotemporally explicit quantification of biophysical variables. With the aim of preparing for this new era of Earth observation, this review summarizes the state-of-the-art retrieval methods that have been applied in experimental imaging spectroscopy studies inferring all kinds of vegeta…

Data streamEarth observation010504 meteorology & atmospheric sciencesComputer scienceUT-Hybrid-D010502 geochemistry & geophysicscomputer.software_genreQuantitative Biology - Quantitative Methods01 natural sciencesArticleGeochemistry and PetrologyFOS: Electrical engineering electronic engineering information engineeringQuantitative Methods (q-bio.QM)0105 earth and related environmental sciencesParametric statisticsData stream miningImage and Video Processing (eess.IV)Electrical Engineering and Systems Science - Image and Video Processing15. Life on land22/4 OA procedureRegressionImaging spectroscopyGeophysicsSpectroradiometer13. Climate actionMulticollinearityFOS: Biological sciencesITC-ISI-JOURNAL-ARTICLEData miningcomputerSurveys in Geophysics
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GIS-based hedonic pricing of landscape

2009

ACL; International audience; Hedonic prices of landscape are estimated in the urban fringe of Dijon (France). Viewshed and its content as perceived at ground level are analyzed from satellite images supplemented by a digital elevation model. Landscape attributes are then fed into econometric models (based on 2,667 house sales) that allows for endogeneity, multicollinearity, and spatial correlations. Results show that when in the line of sight, trees and farmland in the immediate vicinity of houses command positive prices and roads negative prices; if out of sight, their prices are markedly lower or insignificant: the view itself matters. The layout of features in fragmented landscapes comma…

Economics and EconometricsHEDONIC PRICING[SHS.GEO] Humanities and Social Sciences/Geography0211 other engineering and technologies02 engineering and technologyManagement Monitoring Policy and Law[ SHS.GEO ] Humanities and Social Sciences/GeographyAgricultural landVIEW0502 economics and business11. SustainabilityEconometricsEndogeneity050207 economicsMarketingDigital elevation modelLANDSCAPEAmenity05 social sciences021107 urban & regional planning[SHS.GEO]Humanities and Social Sciences/Geography15. Life on land[SHS.ECO]Humanities and Social Sciences/Economics and FinanceAMENITYSightEconometric modelGeographyViewshed analysisMulticollinearity
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Parameter subset selection for the dynamic calibration of activated sludge models (ASMs): experience versus systems analysis.

2007

In this work we address the issue of parameter subset selection within the scope of activated sludge model calibration. To this end, we evaluate two approaches: (i) systems analysis and (ii) experience-based approach. The evaluation has been carried out using a dynamic model (ASM2d) calibrated to describe nitrogen and phosphorus removal in the Haaren WWTP (The Netherlands). The parameter significance ranking shows that the temperature correction coefficients are among the most influential parameters on the model output. This outcome confronts the previous identifiability studies and the experience based approaches which excluded them from their analysis. Systems analysis reveals that parame…

EngineeringEnvironmental EngineeringSystems AnalysisSelection (relational algebra)Sewagebusiness.industryCalibration (statistics)Contrast (statistics)CollinearityActivated sludge modelModels Theoreticalcomputer.software_genreWaste Disposal FluidWater PurificationSystems analysisBioreactorsRankingCalibrationIdentifiabilityData miningbusinesscomputerWater Science and TechnologyWater science and technology : a journal of the International Association on Water Pollution Research
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Penalization and data reduction of auxiliary variables in survey sampling

2012

Survey sampling techniques are quite useful in a way to estimate population parameterssuch as the population total when the large dimensional auxiliary data setis available. This thesis deals with the estimation of population total in presenceof ill-conditioned large data set.In the first chapter, we give some basic definitions that will be used in thelater chapters. The Horvitz-Thompson estimator is defined as an estimator whichdoes not use auxiliary variables. Along with, calibration technique is defined toincorporate the auxiliary variables for sake of improvement in the estimation ofpopulation totals for a fixed sample size.The second chapter is a part of a review article about ridge re…

Estimateur assisté par un modèleModel-assisted estimatorRégression ridge[ MATH.MATH-GM ] Mathematics [math]/General Mathematics [math.GM]Calage sur composantes principalesPenalized calibration[MATH.MATH-GM] Mathematics [math]/General Mathematics [math.GM]Estimateur basé sur un modèleSurvey sampling[MATH.MATH-GM]Mathematics [math]/General Mathematics [math.GM]Ridge regressionCalage pénaliséModel-based estimatorColinéaritéEstimateur de Horvitz-ThompsonHorvitz-Thompson estimatorSondageMulticollinearityPrincipal component calibration
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