Search results for "Colony count"

showing 10 items of 131 documents

Synergistic and Antagonistic Effects of Combined Subzero Temperature and High Pressure on Inactivation of Escherichia coli

2006

ABSTRACT The combined effects of subzero temperature and high pressure on the inactivation of Escherichia coli K12TG1 were investigated. Cells of this bacterial strain were exposed to high pressure (50 to 450 MPa, 10-min holding time) at two temperatures (−20°C without freezing and 25°C) and three water activity levels (a w ) (0.850, 0.992, and ca. 1.000) achieved with the addition of glycerol. There was a synergistic interaction between subzero temperature and high pressure in their effects on microbial inactivation. Indeed, to achieve the same inactivation rate, the pressures required at −20°C (in the liquid state) were more than 100 MPa less than those required at 25°C, at pressures in t…

Water activity[SDV]Life Sciences [q-bio]Hydrostatic pressureColony Count Microbialmedicine.disease_causeApplied Microbiology and BiotechnologySuspension (chemistry)03 medical and health scienceschemistry.chemical_compound[SPI]Engineering Sciences [physics]0404 agricultural biotechnologyAntimicrobial effectFreezingmedicineGlycerol[ SPI ] Engineering Sciences [physics]Hydrostatic PressureEscherichia coliComputingMilieux_MISCELLANEOUS0303 health sciencesEcology[ SDV ] Life Sciences [q-bio]Escherichia coli K12030306 microbiologyChemistryTemperatureWater04 agricultural and veterinary sciences040401 food scienceCulture MediaBiochemistryVolume (thermodynamics)High pressureBiophysicsFood MicrobiologyFood ScienceBiotechnology
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Pyrosequencing vs. culture-dependent approaches to analyze lactic acid bacteria associated to chicha, a traditional maize-based fermented beverage fr…

2015

The diversity of lactic acid bacteria (LAB) associated with chicha, a traditional maize-based fermented alcoholicbeverage from Northwestern Argentina, was analyzed using culture-dependent and culture-independent approaches.Samples corresponding to 10 production steps were obtained from two local producers at Maimará(chicha M) and Tumbaya (chicha T). Whereas by culture-dependent approach a few number of species(Lactobacillus plantarum and Weissella viridescens in chicha M, and Enterococcus faecium and Leuconostocmesenteroides in chicha T) were identified, a higher quantitative distribution of taxa was found in both beveragesby pyrosequencing. The relative abundance of OTUs was higher in chic…

WeissellaCHICHAOtras Ciencias BiológicasLactococcusPopulationDIVERSITYArgentinaColony Count MicrobialPYROSEQUENCINGMicrobiologyPolymerase Chain ReactionZea maysMicrobiologyCiencias BiológicasBeveragesLACTIC ACID BACTERIALactobacillalesRNA Ribosomal 16SLactic acid bacteriaLeuconostoceducationDiversityeducation.field_of_studybiologyISR RAPD PROFILESfood and beveragesGeneral MedicineBiodiversitySequence Analysis DNAbiology.organism_classificationBacterial Typing TechniquesRandom Amplified Polymorphic DNA TechniqueLeuconostoc mesenteroidesSettore AGR/16 - MICROBIOLOGIA AGRARIAFermentationChichabacteria16S rRNA SEQUENCINGPediococcusIdentification by molecular techniques High-throughput sequencing (HTS)HIGH-TROUGHPUT SEQUENCING (HTS)CIENCIAS NATURALES Y EXACTASLactobacillus plantarumFood ScienceEnterococcus faeciumInternational journal of food microbiology
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Fermentative stress adaptation of hybrids within the Saccharomyces sensu stricto complex.

2008

Along the fermentation process yeasts are affected by a succession of stress conditions that affect their viability and fermentation efficiency. Among the stress conditions the most relevant are high sugar concentration and low pH in musts, temperature and, as fermentation progresses, ethanol accumulation. Nowadays, due to the demanding nature of modern winemaking practices and sophisticated wine markets, there is an ever-growing search for particular wine yeast strains possessing a wide range of optimized, improved or novel enological characteristics. Traditionally, the species S. cerevisiae and S. bayanus within the Saccharomyces sensu stricto species are considered some of the most impor…

WineEthanolColony Count MicrobialTemperatureGenetic VariationWineGeneral MedicineBiologyHydrogen-Ion Concentrationbiology.organism_classificationMicrobiologySaccharomycesAdaptation PhysiologicalYeastYeast in winemakingSaccharomycesBotanyFermentationFood MicrobiologyFermentationAlcohol toleranceSaccharomyces kudriavzeviiFood ScienceWinemakingInternational journal of food microbiology
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Ultraviolet B Irradiation Affects Resistance of Rainbow Trout (Oncorhynchus mykiss) Against Bacterium Yersinia ruckeri and Trematode Diplostomum spat…

2007

Ultraviolet B (UVB) radiation is known to have various effects on the immune system of fish, but the effect on the actual disease resistance has remained largely unknown. Here we studied the effect of UVB on the resistance of rainbow trout (Oncorhynchus mykiss) against a bacterium Yersinia ruckeri, the causative agent of enteric red mouth disease, and a trematode parasite Diplostomum spathaceum, which causes cataracts in fish. The fish were exposed to UVB irradiation seven times in 14 days, and inoculated intraperitoneally with Y. ruckeri on day 5 after the first irradiation. On day 2 postinfection (p.i.), the number of viable bacteria in the kidney was lower in UVB-exposed than in unexpose…

Yersinia ruckeriintegumentary systembiologyUltraviolet RaysInoculationEcologyColony Count MicrobialSpleenGeneral Medicinebiology.organism_classificationBiochemistryMicrobiologymedicine.anatomical_structureImmune systemOncorhynchus mykissmedicineAnimalsParasite hostingRainbow troutTrematodaYersinia ruckeriPhysical and Theoretical ChemistryPathogenBacteriaPhotochemistry and Photobiology
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Comparative efficacy of Zataria multiflora Boiss., Origanum compactum and Eugenia caryophyllus essential oils against E. coli O157:H7, feline caliciv…

2013

Abstract Ready-to-eat salads using baby-leaf and multi-leaf mixes are one of the most promising developments in the fresh-cut food industry. There is great interest in developing novel decontamination treatments, which are both safe for consumers and more efficient against foodborne pathogens. In this study, emulsions of essential oils (EOs) from Origanum compactum (oregano), Eugenia caryophyllus (clove), and Zataria multiflora Boiss (zataria) were applied by spray (0.8 ml) after the sanitizing washing step. The aim was to investigate their ability to control the growth of potentially cross-contaminating pathogens and endogenous microbiota in commercial baby leaves, processed in a fresh-cut…

Zataria multifloraTime FactorsFood industryFood HandlingSyzygiumColony Count Microbialmedicine.disease_causeEscherichia coli O157MicrobiologyOriganum compactumMagnoliopsidaOriganumBotanyVegetablesmedicineOils VolatileFood microbiologyFood scienceEscherichia coliFeline calicivirusLamiaceaebiologybusiness.industryInoculationMicrobiotaTemperatureGeneral Medicinebiology.organism_classificationFood safetyAnti-Bacterial AgentsPlant LeavesFood MicrobiologybusinessFood ScienceCalicivirus FelineInternational journal of food microbiology
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Distributions of the growth rate of the germ tubes and germination time of Penicillium chrysogenum conidia depend on water activity

2008

The effects of water activities for sporulation (a(wsp)) and germination (a(wge)) on the distributions of the growth rate of the germ tubes (mu) and the germination time (t(G)) of Penicillium chrysogenum conidia were determined by monitoring the length of the same germ tubes throughout the experiments automatically. No relationship between the individual t(G)'s and mu's could be established. Irrespective of the water activity for germination, mu was greater and t(G) was less for conidia produced at 0.95a(wsp) than that at 0.99a(wsp). At 0.99 a(wge) the mean and the standard deviation of t(G) were smaller than those obtained at 0.95a(wge). At 0.99a(wge), normal distributions for mu and t(G) …

biologyWater activityColony Count MicrobialWaterGerm tubeMycologyPenicillium chrysogenumSpores Fungalbiology.organism_classificationPenicillium chrysogenumModels BiologicalMicrobiologySporeConidiumKineticsHorticultureGerminationPenicilliumBotanyFood MicrobiologyGrowth rateFood ScienceFood Microbiology
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Phenazine antibiotics produced by fluorescent pseudomonads contribute to natural soil suppressiveness to Fusarium wilt

2009

Natural disease-suppressive soils provide an untapped resource for the discovery of novel beneficial microorganisms and traits. For most suppressive soils, however, the consortia of microorganisms and mechanisms involved in pathogen control are unknown. To date, soil suppressiveness to Fusarium wilt disease has been ascribed to carbon and iron competition between pathogenic Fusarium oxysporum and resident non-pathogenic F. oxysporum and fluorescent pseudomonads. In this study, the role of bacterial antibiosis in Fusarium wilt suppressiveness was assessed by comparing the densities, diversity and activity of fluorescent Pseudomonas species producing 2,4-diacetylphloroglucinol (DAPG) (phlD+) …

chlororaphis pcl1391Antifungal AgentsDISEASE SUPRESSIVE SOILMicroorganismColony Count Microbialdose-response relationshipsFLUORESCENT PSEUDOMONADSblack root-rotPlant Rootsgraminis var triticiFusariumSolanum lycopersicumFlaxCluster AnalysisFUSARIUM WILTPathogenPhylogenySoil Microbiologymedia_commonEcologyEPS-2genotypic diversityfood and beveragesBiodiversitygenetic diversityFusarium wilt[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyPHENAZINE ANTIBIOTICSPolymorphism Restriction Fragment LengthDNA BacterialGenotypemedia_common.quotation_subject2PhloroglucinolBiologyMicrobiologyCompetition (biology)MicrobiologyPseudomonasAntibiosisBotanyFusarium oxysporumEcology Evolution Behavior and Systematicsbiological-controlAntibiosisbiology.organism_classificationLaboratorium voor PhytopathologieLaboratory of Phytopathology24-diacetylphloroglucinol-producing pseudomonasoxysporum fo47PhenazinesBeneficial organismAntagonism4-diacetylphloroglucinol-producing pseudomonasnonpathogenic fusarium
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In situ analysis of the bacterial communities associated to farmed eel by whole-cell hybridization.

1999

Bacterial communities in water samples and eel slime were investigated by fluorescence in situ hybridization of whole bacterial cells in an eel intensive culture system over 1 year. A newly developed probe, matching 27 Vibrio spp., and a specific probe for Vibrio vulnificus were used. Phylogenetic probes complementary to selected regions of the 16S and 23S ribosomal RNA revealed that Proteobacteria of the alpha and beta subclass were predominant in water and eel slime. Members of the gamma subclass (e.g. vibrios and aeromonads) were more abundant in eel slime, although no V. vulnificus was detected.

endocrine systemanimal structuresColony Count MicrobialVibrio vulnificusAquacultureApplied Microbiology and BiotechnologyMicrobiologyVibrionaceae23S ribosomal RNARNA Ribosomal 16SmedicineAnimalsIn Situ Hybridization FluorescencePhylogenyAlphaproteobacteriaVibrioEelsbiologymedicine.diagnostic_testBacteriafungiBetaproteobacteriaequipment and suppliesbiology.organism_classificationVibrioRNA BacterialRNA Ribosomal 23SbacteriaProteobacteriaMolecular probeOligonucleotide ProbesWater MicrobiologyBacteriaFluorescence in situ hybridizationLetters in applied microbiology
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Isolation of Gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline.

2007

Aims: To investigate the petroleum hydrocarbon (HC)-degrading potential of indigenous micro-organisms in a sandy Mediterranean coast, accidentally contaminated with petroleum-derived HCs. Methods and Results: Using culturable methods, a population of Gram-positive n-alkane degraders was detected in the contaminated soil. Five isolates, identified as one Nocardia, two Rhodococcus and two Gordonia strains, were able to degrade medium- and long-chain n-alkanes up to C36 as assessed by growth assays and gas chromatography-mass spectrometry analysis. Diverging alkane hydroxylase-encoding genes (alkB) were detected by PCR, using degenerated primers, in all the strains; multiple sequences were obt…

food.ingredientPopulationMolecular Sequence DataAlkBColony Count MicrobialGordoniaSettore BIO/19 - Microbiologia GeneraleGram-Positive BacteriaApplied Microbiology and BiotechnologyPolymerase Chain ReactionGas Chromatography-Mass SpectrometryMicrobiologyactinomycetes alkB GC-MS analysis Gordonian-alkane degradation Nocardia Rhodococcus.BioremediationfoodRNA Ribosomal 16SAlkanesSoil PollutantseducationSoil Microbiologyeducation.field_of_studyBacteriological TechniquesbiologyBase SequenceNocardiaGeneral MedicineSettore CHIM/06 - Chimica Organicabiology.organism_classificationNocardiaceaeHydrocarbonsActinobacteriaBiodegradation EnvironmentalItalybiology.proteinActinomycetalesCytochrome P-450 CYP4ARhodococcusBiotechnologyJournal of applied microbiology
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Serological and molecular identification of Legionella spp. isolated from water and surrounding air samples in Italian healthcare facilities

2016

Abstract Background Legionella is an intracellular microorganism living in natural and artificial aquatic environments. Although its transmission to humans is linked to the inhalation of contaminated aerosols, there is no validated air sampling method for the control and prevention of the disease. The aim of the present study was to provide more information on the distribution of Legionella spp. in indoor environments and to determine whether the same Legionella strains are isolated from air and water samples. Methods Ten healthcare facilities located in seven regions of Italy were enrolled. The serological typing of Legionella spp. from water samples and the surrounding air by active and p…

microbialSerotypesequence analysisLegionellaColony Count Microbialair microbiologyLegionelladna010501 environmental sciences01 natural sciencesLegionella pneumophilaBiochemistrySerologyMicrobiologySerological typing03 medical and health sciences0302 clinical medicinehealth facilitiesBioaerosol; Legionella; Molecular investigation; Serological typingEnvironmental Science(all)italy030212 general & internal medicineTypingcolony count0105 earth and related environmental sciencesGeneral Environmental ScienceMolecular identificationBioaerosolMolecular investigation2300bioaerosol; legionella; molecular investigation; serological typing; bacterial proteins; colony count microbial; drinking water; health facilities; italy; legionella pneumophila; sequence analysis dna; air microbiology; biochemistry;biologydrinking waterlegionella pneumophilaBioaerosol; Legionella; Molecular investigation; Serological typing.Bioaerosol Legionella Molecular investigation Serological typingSequence Analysis DNASequence typesbacterial infections and mycosesbiology.organism_classificationbacterial proteinsBioaerosol; Legionella; Molecular investigation; Serological typing; 2300; BiochemistryBioaerosolEnvironmental Research
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