Search results for "Computer simulation"
showing 10 items of 1054 documents
Diffusion of magnetotactic bacterium in rotating magnetic field
2011
Swimming trajectory of a magnetotactic bacterium in a rotating magnetic field is a circle. Random reversals of the direction of the bacterium motion induces a random walk of the curvature center of the trajectory. In assumption of the distribution of the switching events according to the Poisson process the diffusion coefficient is calculated in dependence on the frequency of the rotating field and the characteristic time between the switching events. It is confirmed by the numerical simulation of the random walk of the bacterium in the rotating magnetic field.
Magnetic micro-droplet in rotating field: numerical simulation and comparison with experiment
2017
Magnetic droplets obtained by induced phase separation in a magnetic colloid show a large variety of shapes when exposed to an external field. However, the description of shapes is often limited. Here we formulate an algorithm based on three dimensional boundary-integral equations for strongly magnetic droplets in a high-frequency rotating magnetic field, allowing us to find their figures of equilibrium in three dimensions. The algorithm is justified by a series of comparisons with known analytical results. We compare the calculated equilibrium shapes with experimental observations and find a good agreement. The main features of these observations are the oblate-prolate transition, the flat…
Parametric excitation of bending deformations of a rod by periodic twist
2013
A model of a semiflexible magnetic filament with magnetization frozen in the direction perpendicular to the tangent of its center line is formulated. It is shown that if the rod is magnetized at its ends in opposite directions, an AC magnetic field causes parametric excitation of bending deformations. Neutral curves of parametric excitation are calculated both analytically and numerically. The shapes arising upon parametric excitation of bending deformations are chiral. Periodic rotation of the chiral filament due to nonhomogeneous twist in a nonhomogeneous AC field causes its unidirectional motion.
Comparison of complex fractionated atrial electrograms at cellular scale using numerical and experimental models.
2010
This study investigates the existence of the pseudo complex fractionated atrial electrogram (CFAE) at cellular level. Our assumptions are based on the fact that CFAEs are linked to the generation of the spiral waves. These are created using a numerical model and an experimental model of in vitro culture of neonatal rats cardiac cells. Pseudo bipolar electrograms resulting from these two models are compared qualitatively and some patterns could be identified as CFAE signature.
Three-dimensional numerical simulation of gaseous flow structure in semidetached binaries
1998
The results of 3D hydrodynamic simulation of mass transfer in semidetached binaries of different types (cataclysmic variables and low-mass X-ray binaries) are presented. We find that taking into account of a circumbinary envelope leads to significant changes in the stream-disc morphology. In particular, the obtained steady-state self-consistent solutions show an absence of impact between gas stream from the inner Lagrangian point L1 and forming accretion disc. The stream deviates under the action of gas of circumbinary envelope, and does not cause the shock perturbation of the disc boundary (traditional `hotspot'). At the same time, the gas of circumbinary envelope interacts with the stream…
Simulation of skin reflectance images using 3D tissue modeling and multispectral Monte Carlo light propagation.
2008
In this work we propose a method to simulate the expected, i.e. seen by a camera, multispectral reflectance images of a large skin surface area by combining Monte Carlo light propagation model and realistic tissue modeling based on three dimensional data acquisition of human body areas. In particular, we aim to simulate more accurately light transport in biological tissue by taking into account the geometrical topography of the skin surface, the structure and optical properties of the skin layers, and the subcutaneous veins in presence. We describe our computation method in detail and present simulated reflectance images results.
Surface-directed spinodal decomposition: Lattice model versus Ginzburg-Landau theory
2009
When a binary mixture is quenched into the unstable region of the phase diagram, phase separation starts by spontaneous growth of long-wavelength concentration fluctuations ("spinodal decomposition"). In the presence of surfaces, the latter provide nontrivial boundary conditions for this growth. These boundary conditions can be derived from lattice models by suitable continuum approximations. But the lattice models can also be simulated directly, and thus used to clarify the conditions under which the Ginzburg–Landau type theory is valid. This comparison shows that the latter is accurate only in the immediate vicinity of the bulk critical point, if thermal fluctuations can also be neglecte…
Amorphous silica modeled with truncated and screened Coulomb interactions: A molecular dynamics simulation study
2007
We show that finite-range alternatives to the standard long-range BKS pair potential for silica might be used in molecular dynamics simulations. We study two such models that can be efficiently simulated since no Ewald summation is required. We first consider the Wolf method, where the Coulomb interactions are truncated at a cutoff distance r_c such that the requirement of charge neutrality holds. Various static and dynamic quantities are computed and compared to results from simulations using Ewald summations. We find very good agreement for r_c ~ 10 Angstroms. For lower values of r_c, the long--range structure is affected which is accompanied by a slight acceleration of dynamic properties…
Logarithmic finite-size effects on interfacial free energies: Phenomenological theory and Monte Carlo studies
2014
The computation of interfacial free energies between coexisting phases (e.g.~saturated vapor and liquid) by computer simulation methods is still a challenging problem due to the difficulty of an atomistic identification of an interface, and due to interfacial fluctuations on all length scales. The approach to estimate the interfacial tension from the free energy excess of a system with interfaces relative to corresponding single-phase systems does not suffer from the first problem but still suffers from the latter. Considering $d$-dimensional systems with interfacial area $L^{d-1}$ and linear dimension $L_z$ in the direction perpendicular to the interface, it is argued that the interfacial …
Numerical simulation of a wawe generator: A case of study
2013
The aim of present work is the numerical simulation of a linear generator, capable of directly converting the kinetic energy, available by the wave, into electrical energy, through the device linear motion (up and down). In this paper, we intend to propose a numerical simulation approach to immersed devices by applying the Immersed Boundary Method. The Theory of linear wave is used to study and reproduce sea conditions and the computational domain is created based on observations available for the site in which it is envisaged the positioning of the device.