Search results for "Conformational isomerism"
showing 10 items of 163 documents
Rigidified Calixarenes Bearing Four Carbamoylmethylphosphineoxide or Carbamoylmethylphosphoryl Functions at the Wide Rim
2000
Conformationally rigidified tetraCMPO derivatives have been prepared from calix[4]arene bis(crown ether) 4 a in which adjacent oxygens are bridged at the narrow rim by two diethylene glycol links. Acylation of the tetraamine 4 c with the CMPO-active ester 5 b gave the tetraphosphine oxide 6 a, while the tetraphosphinate 6 b and the tetraphosphonate 6 c were obtained by Arbuzov reaction of tetrabromoacetamido derivative 7 with PhP(OEt)2 or P(OEt)3. The extraction ability of these CMPO derivatives was checked for selected lanthanides and actinides and compared with the analogous compounds 1 b, 10 b and 10 d derived from calix[4]arene tetrapentyl ether. All rigidified bis(crown ether) ligands …
2-Acylamino- and 2,4-bis(acylamino)pyrimidines as supramolecular synthons analysed by multiple non-covalent interactions. DFT, X-ray diffraction, and…
2012
Intermolecular interactions of ten 2-acylamino and 2,4-bis(acylamino)pyrimidines (7 of which are previously unknown) have been investigated by X-ray structural, quantum chemical (DFT), and NMR spectral methods. Especially the concentration dependencies of the (1)H NMR chemical shifts and titrations with other molecules capable of multiple hydrogen bonding provided useful information regarding their association via triple or quadruple hydrogen bonding, which is controlled by the conformational preferences of 2-acylamino- and 2,4-bis(acylamino)pyrimidines. On comparison of the properties of 2-acylamino- and 2,4-bis(acylamino)pyrimidines with the corresponding pyridines, an additional nitrogen…
Conformational studies of hexapeptides containing two dehydroamino acid residues in positions 2 and 5 in peptide chain
2008
Conformational preferences of a group of hexapeptides containing two dehydroamino acid residues in Positions 2 and 5 in peptide chain were investigated by means of spectroscopic methods (NMR and CD) and theoretical calculations. In the case of dimethylsulfoxide (DMSO) solution, only peptide with free N-termini adopted rigid 310-helical conformation, for the rest of examined peptides extended and “zig-zag” conformers were predominant. CD measurements showed that only in chloroform solution the conformational freedom of investigated peptides was restricted. © 2008 Wiley Periodicals, Inc. Biopolymers 89: 691–699, 2008. This article was originally published online as an accepted preprint. The “…
N-Methyldehydroamino acids promote a configuration cis of N-methylamide bond
2008
Abstract Dehydroamino acids with a methylated N-terminal tertiary amide bond occur in natural small cyclic peptide toxins. To investigate their conformational preferences a systematic theoretical analysis was performed on N ′-methylamides of N -acetyl- N -methyldehydroamino acids (Ac-Δ(Me)Xaa-NHMe, where Xaa = ( Z )-Abu, ( E )-Abu, Val, ( Z )-Phe, and ( E )-Phe) considering the configuration trans and cis of the tertiary amide bond. The ϕ , ψ potential energy surfaces were calculated at the B3LYP/6-31+G ∗∗ //HF/3-21G level with inclusion of the solvent (water) effect (SCRF method). The conformers localised were fully optimised at the B3LYP/6-31+G ∗∗ in vacuo. The accessible areas of the pot…
Anionic tert-butyl-calix[4]arenes substituted at the narrow and wide rim by cobalt bis(dicarbollide)(1−) ions and CMPO-groups. Effect of stereochemis…
2013
Abstract Two ionic calix[4]arenes substituted at the narrow rim with an unpaired number ( n ) of cobalt bis(dicarbollide)(1−) anions ( 1 − ) ( n = 1 and 3) and (4 − n ) CMPO groups ( 3c , 4c ) have been synthesized via a three-step procedure based on nitrile substituted calix[4]arene precursors. Conjointly with them, the compound with a paired ratio of the groups, where n = 2 and the same substituents are located in mutually adjacent 1,2-positions, is reported ( 5c ). Another compound with the paired ratio, but from a wide rim series ( 6c ) ( n = 2) was successfully prepared starting from calix[4]arenes substituted with two nitro functions and two –OH sites available for further modific…
Asymmetrically substituted calix[4]arenes; A two-dimensional 1H NMR study of a tetraester derivative in the cone-conformation
1991
Abstract Several new chiral calix[4]arenes with three or four different substituents in the p-position have been prepared by fragment condensation. Standard derivatization procedures always led to the formation of mixtures of various conformational isomers from which the derivative in the cone-conformation could be isolated only by preparative HPLC. For a tetraester derivative it was shown by two-dimensional 1H NMR spectroscopy, that due to the different substituents the cone-conformation is strongly distorted. The sodium complex of this tetraester, however, assumes a regular cone-conformation again.
Restricted rotation in unbridged sandwich complexes: rotational behavior of closo-[Co(eta 5-NC4H4)(C2B9H11)] derivatives.
2005
Rotation about the centroid/ metal/centroid axis in ferrocene is facile; the activation energy is 1-5 kcal mol - 1 . The structurally similar sandwich complexes derived from closo-[3-Co(η 5 -NC 4 H 4 )-1,2-C 2 B 9 H 1 1 ] (1) have a different rotational habit. In 1, the cis rotamer in which the pyrrolyl nitrogen atom bisects the carboranyl cluster atoms is 3.5 kcal mol - 1 more stable in energy than the rotamer that is second lowest in energy. This cis rotamer is wide, spanning 216°, and may be split into three rotamers of almost equal energy by substituting the N and the carboranyl carbon atoms adequately. To support this statement, closo-[3-Co(η 5 -NC 4 H 4 )-1,2-(CH 3 ) 2 -1,2-C 2 B 9 H …
Naphthalenophane durch doppelte Photocyclodimerisierung von Distyrylnaphthalinen
1989
Bei der Belichtung von Distyrylnaphthalinen entstehen in regiospezifischen Kopf-Kopf-Cycloadditionen Naphthalenophane. Je nach Stellung der Styryl-Gruppen beobachtet man vollkommen stereospezifische Prozesse (1d 2, 1g 3, 1h 4) und Dimerisierungen mit partiellen Stereoselektivitaten (1b 5–8, 1i 9, 10). Masgeblich sind die Rotamerenpopulation im Ausgangsprodukt 1 und die elektronischen und sterischen Effekte in den Excimeren. Prinzipiell sind Excimere mit paralleler Anordnung moglichst vieler π-Zentren bevorzugt — ein experimenteller Befund, der durch HMO-Rechnungen untermauert wird. Naphthalenophanes by Twofold Photocyclodimerizatio Reactions of Distyrylanaphthalenes Regiospecific head-to-he…
Trapping of Different Lipase Conformers in Water-Restricted Environments
1996
Based on a recently reported strategy to rationally activate lipolytic enzymes for use in nonaqueous media [Mingarro, I., et al. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 3308-3312], we compared the behavior in water-restricted environments of activated vs nonactivated forms of different lipases toward their natural substrates, triacylglycerols. To this end, nine lipases from varied origins (mammalian, fungal, and bacterial) were assayed using simple acidolyses as nonaqueous model reactions. The experimental results for several (though not all) lipases, discussed in the light of current structural and functional information, were collectively consistent with a model where, depending on the "…
Lipase-enhanced activity in flavour ester reactions by trapping enzyme conformers in the presence of interfaces
1998
In order to improve the lipase-catalyzed synthesis of flavour esters, we have used the reported strategy of interfacial activation-based molecular (bio)imprinting [Mingarro et al. 1995. Proc. Natl. Acad. Sci. U.S.A. 92: 3308], later called trapping in the presence of amphiphile interfaces (TPI) [Mingarro et al. 1996. Biochemistry 35: 9935]. Five lipases of fungal and mammalian origin typically used for esterification process have been explored to improve production by TPI treatment. A marked enhancement of enzymatic activity has been observed in all TPI-treated lipases assayed and the activation factor obtained was up to 90-fold. The dependence on chain length of acyl donors in the esterifi…