Search results for "Consortium"

showing 10 items of 72 documents

Enquête Archives Ouvertes COUPERIN 2017 : résultats de l’enquête

2017

Les archives ouvertes s’inscrivent de plus en plus solidement et durablement dans le paysage documentaire de l’enseignement supérieur. Si les organismes de recherche ont été précurseurs pour la création d’archives ouvertes, les grandes écoles, mais surtout les universités ont désormais massivement rejoint le mouvement. Signe de cette progression notable, 82 % des répondants disposent en 2017 d’une archive en production ou en cours de mise en œuvre, contre 62 % en 2014. L’adoption majoritaire de la plate-forme HAL (qui représente 79 % des archives en production et 84 % des archives des universités parmi les répondants) se renforce encore depuis 2014. La structuration d’un réseau des utilisat…

Archive ouverte HAL[SHS.INFO]Humanities and Social Sciences/Library and information sciencesInstitutional Repositories[SHS.INFO] Humanities and Social Sciences/Library and information sciencesOpen archivesScience ouverteArchives ouvertesHAL Open ArchiveArchive ouverteConsortium CouperinOpen archiveOpen scienceGreen open accessArchive ouverte institutionnelle
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Les archives ouvertes : état des lieux en 2017

2018

International audience; Les archives ouvertes s’inscrivent de plus en plus solidement et durablement dans le paysage documentaire de l’enseignement supérieur. Si les organismes de recherche ont été précurseurs pour la création d’archives ouvertes, les grandes écoles, mais surtout les universités ont désormais massivement rejoint le mouvement. Signe de cette progression notable, 82 % des répondants disposent en 2017 d’une archive en production ou en cours de mise en œuvre, contre 62 % en 2014. L’adoption majoritaire de la plate-forme HAL (qui représente 79 % des archives en production et 84 % des archives des universités parmi les répondants) se renforce encore depuis 2014. La structuration …

Archive ouverte HAL[SHS.INFO]Humanities and Social Sciences/Library and information sciencesInstitutional Repositories[SHS.INFO] Humanities and Social Sciences/Library and information sciencesOpen archivesScience ouverteArchives ouvertesHAL Open ArchiveArchive ouverteConsortium CouperinOpen archiveOpen scienceGreen open accessArchive ouverte institutionnelle
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Stimulation of sewage sludge treatment by carbon sources and bioaugmentation with a sludge-derived microbial consortium

2021

Abstract Recently, sewage sludge (SS) disposal has become one of the greatest global challenges. In this study, we aimed to evaluate the effect of faba bean straw (Straw-B), wheat straw (Straw-W), and wood-chip pellets (WCP) amended to SS, as well as bioaugmentation (BA), on the physicochemical characteristics and structure of the microbial community of the treated SS. Sixteen days of incubation of SS-containing mixtures revealed the highest efficiency of Straw-W(BA) in terms of SS stabilisation, i.e., the highest and most stable respiration intensity, the lowest ammonia emission, and the highest stimulation effect on the cress seedling growth. Shotgun sequencing data analysis showed that P…

BioaugmentationEnvironmental Engineering010504 meteorology & atmospheric sciencesMicrobial ConsortiaSewageWastewater010501 environmental sciences01 natural sciencesAmmoniaHumansEnvironmental ChemistryFood scienceWaste Management and DisposalBetaproteobacteria0105 earth and related environmental sciencesSewagebiologyChemistrybusiness.industryMicrobial consortiumStrawbiology.organism_classificationPollutionCarbonSewage sludge treatmentProteobacteriabusinessSludgeScience of The Total Environment
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The effect of spent bleaching earth ageing process on its physicochemical and microbial composition and its potential use as a source of fatty acids …

2014

This study was aimed at investigating the physicochemical and microbiological changes that took place during the ageing process of spent bleaching earth in the presence of autochthonous microorganisms. Research material included fresh spent bleaching earth (SBE0) and the same material after 3 years of storage at the constant temperature of 20 °C, without aeration and moistening (SBE3). Changes in the chemical composition of analysed waste material were observed during its ageing process point to a spontaneous bioconversion of fat substance towards formation and/or release of free saturated fatty acids C16:0 and C18:0 (14.3 g 100 g(-1) D.M.), triterpenes (8.48 g 100 g(-1) D.M.), cholesterol …

BioconversionTime FactorsBioconversionMicroorganismHealth Toxicology and MutagenesisMicrobial ConsortiaFatty Acids MonounsaturatedMetals HeavyOrganic chemistryPlant OilsSoil PollutantsEnvironmental ChemistryFood scienceSaturated fatty acidsLipolytic microorganismsChemical compositionSoil MicrobiologyWaste ProductsChemistryFatty AcidsTemperatureGeneral MedicineMicrobial consortiumBiodegradationHydrogen-Ion ConcentrationPollutionTriterpenesRefuse DisposalBiodegradation EnvironmentalSpent bleaching earth (SBE)AgeingRapeseed OilPolandAerationSoil microbiologyResearch ArticleEnvironmental Science and Pollution Research
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X Chromosome Contribution to the Genetic Architecture of Primary Biliary Cholangitis

2021

Background & aims: Genome-wide association studies in primary biliary cholangitis (PBC) have failed to find X chromosome (chrX) variants associated with the disease. Here, we specifically explore the chrX contribution to PBC, a sexually dimorphic complex autoimmune disease. Methods: We performed a chrX-wide association study, including genotype data from 5 genome-wide association studies (from Italy, United Kingdom, Canada, China, and Japan; 5244 case patients and 11,875 control individuals). Results: Single-marker association analyses found approximately 100 loci displaying P < 5 × 10-4, with the most significant being a signal within the OTUD5 gene (rs3027490; P = 4.80 × 10-6; odds…

Canadian-US PBC Consortium0301 basic medicineMaleLinkage disequilibriumGenome-wide association studyDiseasePBCSettore MED/03 - GENETICA MEDICALinkage Disequilibrium0302 clinical medicineUK-PBC ConsortiumGenotypeMitochondrial Precursor Protein Import Complex ProteinsItalian PBC Genetics Study GroupOdds RatioX-Wide Association StudyJapan PBC-GWAS ConsortiumX chromosomeGeneticsLiver Cirrhosis BiliaryGastroenterologyForkhead Transcription FactorsDNA-Binding ProteinsShal Potassium Channels030211 gastroenterology & hepatologyFemaleAdultMonosaccharide Transport ProteinsSuperenhancerLocus (genetics)Single-nucleotide polymorphismBiologyProtein Serine-Threonine KinasesPolymorphism Single NucleotideArticleWhite People03 medical and health sciencesAsian PeopleProto-Oncogene ProteinsEndopeptidasesHumansCell LineageGenetic Predisposition to DiseaseMeta-analysiGenetic associationChromosomes Human XGastroenterology & HepatologyHepatology1103 Clinical SciencesMeta-analysis030104 developmental biologyGenetic Loci1114 Paediatrics and Reproductive MedicineMeta-analysis; Superenhancer; X-Wide Association Study1109 NeurosciencesCarrier ProteinsGenome-Wide Association Study
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Recommendations from the iSBTc-SITC/FDA/NCI Workshop on Immunotherapy Biomarkers

2011

Abstract Purpose: To facilitate development of innovative immunotherapy approaches, especially for treatment concepts exploiting the potential benefits of personalized therapy, there is a need to develop and validate tools to identify patients who can benefit from immunotherapy. Despite substantial effort, we do not yet know which parameters of antitumor immunity to measure and which assays are optimal for those measurements. Experimental Design: The iSBTc-SITC (International Society for Biological Therapy of Cancer-Society for Immunotherapy of Cancer), FDA (Food and Drug Administration), and NCI (National Cancer Institute) partnered to address these issues for immunotherapy of cancer. Here…

Cancer ResearchPathologymedicine.medical_specialtyHealth Planning Guidelinesmedicine.medical_treatmentConsensus Development Conferences as TopicStandardized testImmune monitoringt-cell immunity cytokine flow-cytometry cancer vaccine consortium colony-stimulating factor b elispot assay phase-ii trial dendritic cells clinical-trials hiv vaccine harmonization guidelinesMedical OncologyArticleFood and drug administrationNeoplasmsmedicineBiomarkers TumorHumansMedical physicsPersonalized therapySocieties MedicalAntitumor immunitybusiness.industryQuality assessmentUnited States Food and Drug AdministrationCancerInternational AgenciesImmunotherapymedicine.diseaseNational Cancer Institute (U.S.)United StatesOncologyPractice Guidelines as TopicImmunotherapybusiness
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Associations of common breast cancer susceptibility alleles with risk of breast cancer subtypes in BRCA1 and BRCA2 mutation carriers

2014

Introduction More than 70 common alleles are known to be involved in breast cancer (BC) susceptibility, and several exhibit significant heterogeneity in their associations with different BC subtypes. Although there are differences in the association patterns between BRCA1 and BRCA2 mutation carriers and the general population for several loci, no study has comprehensively evaluated the associations of all known BC susceptibility alleles with risk of BC subtypes in BRCA1 and BRCA2 carriers. Methods We used data from 15,252 BRCA1 and 8,211 BRCA2 carriers to analyze the associations between approximately 200,000 genetic variants on the iCOGS array and risk of BC subtypes defined by estrogen re…

Cancer ResearchReceptor ErbB-2Genes BRCA2BRCALOCIGenes BRCA1MODIFIERSVARIANTSErbB-2610 Medical sciences MedicineDuctalReceptorsMedicine and Health SciencesINVESTIGATORSBreastskin and connective tissue diseasesProgesteroneMedicine(all)Carcinoma Ductal BreastMiddle AgedAdult; Aged; Alleles; Breast Neoplasms; Carcinoma; Carcinoma Ductal Breast; Carcinoma Lobular; Female; Genetic Predisposition to Disease; Heterozygote; Humans; Middle Aged; Neoplasm Grading; Neoplasm Staging; Receptor ErbB-2; Receptors Estrogen; Receptors Progesterone; Genes BRCA1; Genes BRCA2; Cancer Research; OncologyOncologyReceptors EstrogenTUMOR SUBTYPESFemaleReceptors ProgesteroneReceptorResearch ArticleAdultHeterozygote610Breast NeoplasmsMEDULLARY CARCINOMAOVARIAN-CANCERLobularHumansGenetic Predisposition to DiseaseGENOME-WIDE ASSOCIATIONAllelesAgedNeoplasm StagingAdult; Aged; Alleles; Breast Neoplasms; Carcinoma; Carcinoma Ductal Breast; Carcinoma Lobular; Female; Genetic Predisposition to Disease; Heterozygote; Humans; Middle Aged; Neoplasm Grading; Neoplasm Staging; Receptor ErbB-2; Receptors Estrogen; Receptors Progesterone; Genes BRCA1; Genes BRCA2CONSORTIUMCarcinomaBRCA1EstrogenBRCA2Carcinoma LobularESTROGEN-RECEPTORGenesNeoplasm GradingBreast Cancer Research
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Harmonization of Neuroticism and Extraversion phenotypes across inventories and cohorts in the Genetics of Personality Consortium:an application of I…

2014

Mega- or meta-analytic studies (e.g. genome-wide association studies) are increasingly used in behavior genetics. An issue in such studies is that phenotypes are often measured by different instruments across study cohorts, requiring harmonization of measures so that more powerful fixed effect meta-analyses can be employed. Within the Genetics of Personality Consortium, we demonstrate for two clinically relevant personality traits, Neuroticism and Extraversion, how Item-Response Theory (IRT) can be applied to map item data from different inventories to the same underlying constructs. Personality item data were analyzed in >160,000 individuals from 23 cohorts across Europe, USA and Australia…

DIMENSIONSDISORDERS515 PsychologyeducationPersonality AssessmentGenome-wide association studiesExtraversion PsychologicalNEO-PI5-FACTOR MODELGeneticsHumansGenetics(clinical)Ecology Evolution Behavior and SystematicsOriginal ResearchNeuroticismMeasurementNeurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7]Models StatisticalOther Research Radboud Institute for Health Sciences [Radboudumc 0]GENOME-WIDE METAANALYSISTEMPERAMENTASSOCIATIONAnxiety Disorders3142 Public health care science environmental and occupational healthMeta-analysisPhenotypeMEASUREMENT INVARIANCECLONINGERSUrological cancers Radboud Institute for Health Sciences [Radboudumc 15]REPLICATIONDevelopmental PsychopathologyItem-Response TheoryConsortiumGenome-Wide Association StudyPersonality
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Large expert-curated database for benchmarking document similarity detection in biomedical literature search

2019

P.B. participated in the design, carried out the study, implemented the websites and search systems and wrote the manuscript. RELISH consortium annotated the articles. Y.Z. conceived the study, participated in the initial design, assisted in analyzing data and wrote the manuscript. All authors read, contributed to the discussion and approved the manuscript. Rayner Gonzálezlez-Prendes is member of the RELISH consortium. Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly deve…

Evaluación comparativaMedicina i literaturaData FormatRSNational Institutes of Health (U.S.) -- PubMed CentralQH301Library and Information StudiesCerca documentalInvestigaciónGeneric health relevanceCiencias médicasRELISH ConsortiumCancerCiència
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Sex differences in the prevalence of Helicobacter pylori infection: an individual participant data pooled analysis (StoP Project)

2019

Background Helicobacter pylori (H. pylori) infection is more frequent among men, though the magnitude of the association might be inaccurate due to potential misclassification of lifetime infection and publication bias. Moreover, infection is common, and most studies are cross-sectional. Thus, prevalence ratios (PRs) may be easier to interpret than odds ratios (ORs). Aim The aim of this study was to quantify the association between sex and H. pylori infection using controls from 14 studies from the Stomach Cancer Pooling (StoP) Project. Participants and methods H. pylori infection was defined based on IgG serum antibody titers or multiplex serology. Participants were also classified as infe…

Gastritis AtrophicMalemedicine.medical_specialtyconsortiumRisk AssessmentHelicobacter InfectionsSerology03 medical and health sciencesSex Factors0302 clinical medicineAtrophyRisk FactorsInternal medicinePrevalencesexHumansMedicinepooled analysiSerologic TestsStomach cancerAgedHelicobacter pyloriHepatologybiologybusiness.industryStomachGastroenterologyindividual participant dataPublication biasOdds ratioMiddle AgedHelicobacter pyloribiology.organism_classificationmedicine.diseaseAntibodies BacterialConfidence intervalImmunoglobulin G030220 oncology & carcinogenesisMeta-analysisFemale030211 gastroenterology & hepatologyAtrophybusinessEuropean Journal of Gastroenterology & Hepatology
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