Search results for "Cripto"

showing 10 items of 863 documents

Comparative transcriptomic analysis of the mechanisms underpinning ageing and fecundity in social insects.

2021

The exceptional longevity of social insect queens despite their lifelong high fecundity remains poorly understood in ageing biology. To gain insights into the mechanisms that might underlie ageing in social insects, we compared gene expression patterns between young and old castes (both queens and workers) across different lineages of social insects (two termite, two bee and two ant species). After global analyses, we paid particular attention to genes of the insulin/insulin-like growth factor 1 signalling (IIS)/target of rapamycin (TOR)/juvenile hormone (JH) network, which is well known to regulate lifespan and the trade-off between reproduction and somatic maintenance in solitary insects…

0106 biological sciencesAginginsulinmedia_common.quotation_subjectInsectIsopteraBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyTranscriptome03 medical and health sciencestranscriptomicsSpecies SpecificitylongevityAnimalsSocialityResearch Articles030304 developmental biologymedia_common0303 health sciencessocial insectsAntsjuvenile hormoneGene Expression ProfilingLongevityArticlesTORBeesFecundityFertilityAgeingEvolutionary biologyJuvenile hormoneGeneral Agricultural and Biological SciencesTranscriptomeVitellogeninsPhilosophical transactions of the Royal Society of London. Series B, Biological sciences
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Changes in carbohydrate metabolism in Plasmopara viticola-infected grapevine leaves.

2011

International audience; The oomycete Plasmopara viticola is responsible for downy mildew, a severe grapevine disease. In infected grapevine leaves, we have observed an abnormal starch accumulation at the end of the dark period, suggesting modifications in starch metabolism. Therefore, several complementary approaches, including transcriptomic analyses, measurements of enzyme activities, and sugar quantification, were performed in order to investigate and to understand the effects of P. viticola infection on leaf starch and-to a larger extent-carbohydrate metabolism. Our results indicate that starch accumulation is associated with an increase in ADP-glucose pyrophosphorylase (AGPase) activit…

0106 biological sciencesChlorophyllPhysiologyStarchenzymatic activityhexosesbeta-AmylaseplantGlucose-1-Phosphate Adenylyltransferasetranscriptomic analyse01 natural sciencesinvertasechemistry.chemical_compoundphytopathogenGene Expression Regulation PlantVitisTrehalaseOligonucleotide Array Sequence Analysis0303 health sciencesbiologyfood and beveragesStarchGeneral MedicineEnzymesBiochemistryOomycetesRNA PlantPlasmopara viticolaCarbohydrate metabolism03 medical and health sciencesPlasmopara viticolaADP-glucose pyrophosphorylasePolysaccharidesVignecarbohydrate metabolism[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biologytrehalose030304 developmental biologyPlant Diseasesphotosynthesisbiology.organism_classificationtrehalaseTrehaloseEnzyme assayPlant LeavesInvertasechemistryVitis viniferabiology.proteinDowny mildewfungialpha-AmylasesphysiopathologyAgronomy and Crop Science010606 plant biology & botany
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Linking extreme seasonality and gene expression in arctic marine protists

2021

ABSTRACTAt high latitudes, strong seasonal differences in light availability affect marine organisms and restrict the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially true for the dark polar night period, which up until recently was assumed to be devoid of biological activity. A 12 million transcripts catalogue was built from 0.45-10 μm protist assemblages sampled over 13 months in a time series station in an arctic fjord in Svalbard. Community gene expression was correlated with seasonality, with light as the main driving factor. Transcript diversity and evenn…

0106 biological sciencesClimate changemicrobial eukaryotesBiologyunicellular eukaryotesmedicine.disease_cause01 natural sciences03 medical and health sciencespolar daymedicineEcosystem14. Life underwater030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesmetatranscriptomicsPolar nightpolar nightEcology010604 marine biology & hydrobiologyAquatic ecosystemProtistSeasonalitymedicine.disease[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Arctic13. Climate actionSpecies evennesstime seriesgeographic locations
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Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis,…

2019

[Background] Monogenean flatworms are the main fish ectoparasites inflicting serious economic losses in aquaculture. The polyopisthocotylean Sparicotyle chrysophrii parasitizes the gills of gilthead sea bream (GSB, Sparus aurata) causing anaemia, lamellae fusion and sloughing of epithelial cells, with the consequent hypoxia, emaciation, lethargy and mortality. Currently no preventive or curative measures against this disease exist and therefore information on the host-parasite interaction is crucial to find mitigation solutions for sparicotylosis. The knowledge about gene regulation in monogenean-host models mostly comes from freshwater monopysthocotyleans and almost nothing is known about …

0106 biological sciencesGillGillsApoptosis01 natural sciencesTranscriptomeSparus aurataGene expression0303 health sciencesHigh-Throughput Nucleotide Sequencingmedicine.anatomical_structureLiverHelminthiasis AnimalMonogeneaBiotechnologyResearch ArticleFish Proteinsanimal structureslcsh:QH426-470lcsh:BiotechnologyFisheriesSpleenBiologyMicrobiologyHost-Parasite Interactions03 medical and health sciencesImmune systemIllumina RNA-seqImmunitylcsh:TP248.13-248.65GeneticsmedicineAutophagyAnimals14. Life underwaterPlatelet activationImmune responseTranscriptomics030304 developmental biologyCell ProliferationSequence Analysis RNASparus aurata Sparicotyle chrysophrii Gills Monogenea Ectoparasites Illumina RNA-seq Transcriptomics Apoptosis Immune responseGene Expression ProfilingAquatic animalSea Breamlcsh:GeneticsGene Expression RegulationPlatyhelminthsSparicotyle chrysophriiEctoparasitesSpleen010606 plant biology & botany
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Use of Leaf and Fruit Morphometric Analysis to Identify and Classify White Mulberry (Morus alba L.) Genotypes

2018

Digital image analysis and multivariate data analysis were used in this study to identify a set of leaf and fruit morphometric traits to discriminate white mulberry (Morus alba L.) cultivars. The trial was conducted using three- to five-year-old potted cuttings of several white mulberry cultivars. 32 leaf morphometric descriptors were recorded in 2011 and 2012 from 11 mulberry cultivars using image analysis of scanned leaves, whereas six fruit descriptors were recorded in 2011 from nine mulberry cultivars. Linear discriminant analysis (LDA) was used to identify a subset of measured variables that could discriminate the cultivars in trial. Biplot analysis, followed by cluster analysis, was p…

0106 biological sciencesLinear discriminant analysifood.ingredientlinear discriminant analysisBiplotPlant ScienceBiology01 natural sciencesCutting0404 agricultural biotechnologyfoodGenotypedescriptordigital image analysisLeaf sizeCultivarlcsh:Agriculture (General)MorphometricsMultivariate analysi<i>Morus alba</i>Digital image analysi04 agricultural and veterinary sciencesLinear discriminant analysislcsh:S1-972040401 food scienceMorus albaHorticulturemultivariate analysisWhite MulberryAgronomy and Crop Sciencebiplot010606 plant biology & botanyFood ScienceAgriculture
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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

2009

46 pages, 4 tables, 6 figures, 3 additinoal files.

0106 biological sciencesMESH: Genome PlantArabidopsis thalianaGene regulatory networkArabidopsis01 natural sciencesTranscriptomeGene Expression Regulation PlantArabidopsisMESH: Gene Expression Regulation DevelopmentalCluster AnalysisGene Regulatory NetworksMESH: ArabidopsisMESH: EcosystemMESH: Models GeneticOligonucleotide Array Sequence AnalysisMESH: Gene Regulatory NetworksGenetics0303 health sciencesMESH: Stress MechanicalbiologyMESH: Genomicsfood and beveragesGene Expression Regulation DevelopmentalGenomicsPhenotypeAlgorithmsGenome PlantMESH: MutationSystems biologyGenomicsMESH: AlgorithmsComputational biologyMESH: Arabidopsis ProteinsMESH: Phenotype03 medical and health sciencesMESH: Gene Expression Profiling[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Gene Expression Regulation PlantEcosystem030304 developmental biologyModels GeneticMicroarray analysis techniquesArabidopsis ProteinsGene Expression ProfilingResearchfungiRobustness (evolution)biology.organism_classificationMESH: Cluster AnalysisGene expression profilingMutationMESH: Oligonucleotide Array Sequence AnalysisStress Mechanical010606 plant biology & botany
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Offspring reverse transcriptome responses to maternal deprivation when reared with pathogens in an insect with facultative family life

2020

Offspring of species with facultative family life are able to live with and without parents (i.e. to adjust to extreme changes in their social environment). While these adjustments are well understood on a phenotypic level, their genetic underpinnings remain surprisingly understudied. Investigating gene expression changes in response to parental absence may elucidate the genetic constraints driving evolutionary transitions between solitary and family life. Here, we manipulated maternal presence to observe gene expression changes in the fat body of juvenile European earwigs, an insect with facultative family life. Because parents typically protect offspring against pathogens, expression chan…

0106 biological sciencesMaleInsectaOffspringEvolution[SDV]Life Sciences [q-bio]Biology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyTranscriptome03 medical and health sciencesAnimalsGeneComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneral Environmental ScienceGenetics0303 health sciencesMaternal deprivationFacultativeGeneral Immunology and MicrobiologyBehavior Animal[SDV.BA]Life Sciences [q-bio]/Animal biologyGeneral MedicinePhenotypeBiological EvolutionFamily life[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyFemalesense organsGeneral Agricultural and Biological SciencesTranscriptomePaternal care
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Coupling transcriptomics and behaviour to unveil the olfactory system of Spodoptera exigua larvae

2020

AbstractChemoreception in insects is crucial for many aspects related to food seeking, enemy avoidance, and reproduction. Different families of receptors and binding proteins interact with chemical stimuli, including odorant receptors (ORs), ionotropic receptors (IRs), gustatory receptors (GRs), odorant binding proteins (OBPs) and chemosensory proteins (CSPs). In this work, we describe the chemosensory-related gene repertoire of the worldwide spread pest Spodoptera exigua (Lepidoptera: Noctuide) focusing on the transcripts expressed in larvae, which feed on many horticultural crops producing yield losses. A comprehensive de novo assembly that includes reads from chemosensory organs of larva…

0106 biological sciencesMaleOlfactory systemanimal structuresOdorant bindingmedia_common.quotation_subject[SDV]Life Sciences [q-bio]Gene ExpressionOlfactionInsectSpodopteraSpodopteraReceptors Odorant01 natural sciencesBiochemistryLepidoptera genitaliaTranscriptomeBeet armywormExiguaAnimalsRNA-SeqPheromone bindingAcroleinGeneEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSmedia_commonGeneticsGenomic LibraryPropiophenonesbiologyGene Expression ProfilingfungiGeneral Medicinebiology.organism_classification010602 entomologyOrgan SpecificityLarvaOdorantsNoctuidaeInsect ProteinsFemaleHexanolsTranscriptome010606 plant biology & botany
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2021

Abstract Insect cuticular hydrocarbons (CHCs) are highly diverse and have multiple functions, including communication and waterproofing. CHC profiles form species-specific, complex blends of up to 150 compounds. Especially in ants, even closely related species can have largely different profiles, raising the question how CHC differences are mirrored in the regulation of biosynthetic pathways. The neotropical ants Crematogaster levior and Camponotus femoratus both consist of two cryptic species each that are morphologically similar, but express strongly different CHC profiles. This is ideal to study the molecular basis of CHC differences. We thus investigated gene expression differences in f…

0106 biological sciencesMutualism (biology)Genetics0303 health sciencesSpecies complexCandidate genemedia_common.quotation_subjectInsectBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesTranscriptome03 medical and health sciencesGene expressionGeneticsGene familyMolecular BiologyDrosophilaGenetics (clinical)030304 developmental biologymedia_commonG3: Genes|Genomes|Genetics
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Membrane glycerolipid remodeling triggered by nitrogen and phosphorus starvation in Phaeodactylum tricornutum.

2014

International audience; Diatoms constitute a major phylum of phytoplankton biodiversity in ocean water and freshwater ecosystems. They are known to respond to some chemical variations of the environment by the accumulation of triacylglycerol, but the relative changes occurring in membrane glycerolipids have not yet been studied. Our goal was first to define a reference for the glycerolipidome of the marine model diatom Phaeodactylum tricornutum, a necessary prerequisite to characterize and dissect the lipid metabolic routes that are orchestrated and regulated to build up each subcellular membrane compartment. By combining multiple analytical techniques, we determined the glycerolipid profil…

0106 biological sciencesPhysiologyPlant ScienceThylakoids01 natural sciencesPhaeodactylum tricornutumTranscriptomeMGDGNutrientnutrient starvationLipids metabolismSettore BIO/04 - Fisiologia VegetaleDigalactosyldiacylglycerolPhospholipids0303 health sciencesbiologyNitrogen starvationmicroalgaeMonogalactosyldiacyglycerolPhosphorusArticlesAdaptation PhysiologicalBiochemistryThylakoidSulfoquinovosyldiacylglycerollipids (amino acids peptides and proteins)DGDGNitrogenchemistry.chemical_elementlipidsMembrane Lipids03 medical and health sciencesSQDG[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biology14. Life underwaterPhaeodactylum tricornutumTriglycerides030304 developmental biologyDiatomsMembranesGene Expression ProfilingPhosphorusfungiPhosphorus starvationGlycerolipidsLipid metabolismmetabolic pathwaybiology.organism_classificationMetabolic pathwayPhosphatidylcholineDiatomchemistryPhytoplanktonLipidomics010606 plant biology & botany
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