Search results for "Culture media"

showing 10 items of 272 documents

Human norovirus binding to select bacteria representative of the human gut microbiota

2016

Recent reports describe the ability of select bacterial strains to bind human norovirus, although the specificity of such interactions is unknown. The purpose of this work was to determine if a select group of bacterial species representative of human gut microbiota bind to human norovirus, and if so, to characterize the intensity and location of that binding. The bacteria screened included naturally occurring strains isolated from human stool (Klebsiella spp., Citrobacter spp., Bacillus spp., Enterococcus faecium and Hafnia alvei) and select reference strains (Staphylococcus aureus and Enterobacter cloacae). Binding in PBS was evaluated to three human norovirus strains (GII.4 New Orleans 2…

RNA viruses0301 basic medicinePhysiologyvirusesEnterococcus faeciumFimbrialcsh:MedicineBacillusPathology and Laboratory Medicinemedicine.disease_causePilusFecesBinding AnalysisCitrobacterKlebsiellaMedicine and Health SciencesElectron Microscopylcsh:ScienceCitrobacterMicroscopyMultidisciplinarybiologyChemistryBody FluidsBloodMedical MicrobiologyViral PathogensVirusesAnaerobic bacteriaPathogensAnatomyCell Binding AssayResearch ArticleCell BindingStaphylococcus aureusCell PhysiologyAnaerobic BacteriaResearch and Analysis MethodsMicrobiologyCalicivirusesMicrobiology03 medical and health sciencesEnterobacter cloacaemedicineHumansMicrobial PathogensChemical CharacterizationBiology and life sciencesBacteriaNoroviruslcsh:ROrganismsHafnia alveiCell Biologybiology.organism_classificationCulture MediaGastrointestinal Microbiome030104 developmental biologyFimbriae BacterialNorovirusMicrobial InteractionsTransmission Electron Microscopylcsh:QEnterobacter cloacaeBacteriaEnterococcus faeciumPLOS ONE
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Endothelial cells and normal breast epithelial cells enhance invasion of breast carcinoma cells by CXCR-4-dependent up-regulation of urokinase-type p…

2008

Here we show the increase of invasion of three breast cancer cell lines (8701-BC, MDA-MB-231 and SKBR3) upon long-term co-incubation with culture medium of normal microvascular endothelial cells (MVEC) and normal breast epithelial cells (HB2). The enhancement of invasion relied on the interaction of microvascular endothelial cell and normal breast epithelial cell CXCL12 (SDF1) chemokine, whose expression by breast cancer cells was very low, with the cognate CXCR4 receptor of malignant cells, which resulted in over-expression of the urokinase-type plasminogen activator receptor (uPAR) on their surfaces. uPAR over-expression, showed by RT-PCR and Western blotting, was paralleled by increased …

Receptors CXCR4MAP Kinase Kinase 4AngiogenesisCellBreast NeoplasmsReceptors Cell SurfaceCell CommunicationBiologyCell LineReceptors Urokinase Plasminogen ActivatorPathology and Forensic MedicineMetastasisangiogenesisbreast cancerTumor Cells CulturedmedicineHumansNeoplasm InvasivenessBreastSettore BIO/06 - Anatomia Comparata E CitologiaPhosphorylationskin and connective tissue diseasesCXCR4Settore MED/04 - Patologia GeneraleNeovascularization PathologicReverse Transcriptase Polymerase Chain ReactionFibrinolysisEpithelial CellsCXCL12invasionmedicine.diseasemicroenvironmentChemokine CXCL12Neoplasm ProteinsUp-RegulationEndothelial stem cellUrokinase receptormedicine.anatomical_structureCulture Media ConditionedCancer cellCancer researchFemaleJNKEndothelium VascularBreast diseaseSDF1uPARPlasminogen activatorThe Journal of Pathology
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Selection of single-chain antibodies against the VP8* subunit of rotavirus VP4 outer capsid protein and their expression in Lactobacillus casei.

2004

ABSTRACTSingle-chain antibodies (scFv) recognizing the VP8* fraction of rotavirus outer capsid and blocking rotavirus infection in vitro were isolated by phage display. Vectors for the extracellular expression inLactobacillus caseiof one of the scFv were constructed.L. caseiwas able to secrete active scFv to the growth medium, showing the potential of probiotic bacteria to be engineered to express molecules suitable for in vivo antirotavirus therapies.

RotavirusLactobacillus caseiPhage displayvirusesMolecular Sequence Datachemical and pharmacologic phenomenamedicine.disease_causeAntibodies ViralApplied Microbiology and BiotechnologyVirusMicrobiologyCell Linefluids and secretionsPeptide LibraryRotavirusmedicineHumansAmino Acid SequencePeptide libraryEcologybiologyfood and beveragesrespiratory systembiology.organism_classificationPhysiology and BiotechnologyVirologyComplementarity Determining RegionsIn vitroCulture MediaLacticaseibacillus caseiCapsidCapsid ProteinsSingle-Chain AntibodiesFood ScienceBiotechnologyApplied and environmental microbiology
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Btn2p is involved in ethanol tolerance and biofilm formation in flor yeast

2008

Flor yeasts are a particular kind of Saccharomyces cerevisiae strains involved in Sherry wine biological ageing. During this process, yeasts form a film on the wine surface and use ethanol as a carbon source, producing acetaldehyde as a by-product. Acetaldehyde induces BTN2 transcription in laboratory strains. Btn2p is involved in the control of the subcellular localization of different proteins. The BTN2 gene shows a complex expression pattern in wine yeast, increasing its expression by acetaldehyde, but repressing it by ethanol. A flor yeast strain transcribes more BTN2 than a first fermentation yeast during growth, but less under different stress conditions. BTN2 deletion decreases flor …

Saccharomyces cerevisiae ProteinsAmino Acid Transport SystemsSaccharomyces cerevisiaeFlorAcetaldehydeSaccharomyces cerevisiaeApplied Microbiology and BiotechnologyMicrobiologychemistry.chemical_compoundGene Expression Regulation FungalGrowth mediumMembrane GlycoproteinsEthanolbiologyBiofilmAcetaldehydeMembrane ProteinsGeneral Medicinebiology.organism_classificationYeastCulture MediaYeast in winemakingchemistryBiochemistryBiofilmsFermentationGene DeletionHeat-Shock ResponseBiotechnologyFEMS Yeast Research
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Addition of ammonia or amino acids to a nitrogen-depleted medium affects gene expression patterns in yeast cells during alcoholic fermentation

2007

Yeast cells require nitrogen and are capable of selectively using good nitrogen sources in preference to poor ones by means of the regulatory mechanism known as nitrogen catabolite repression (NCR). Herein, the effect of ammonia or amino acid addition to nitrogen-depleted medium on global yeast expression patterns in yeast cells was studied using alcoholic fermentation as a system. The results indicate that there is a differential reprogramming of the gene expression depending on the nitrogen source added. Ammonia addition resulted in a higher expression of genes involved in amino acids biosynthesis while amino acid addition prepares the cells for protein biosynthesis. Therefore, a high per…

Saccharomyces cerevisiae ProteinsBiologyApplied Microbiology and BiotechnologyMicrobiologySaccharomyceschemistry.chemical_compoundBiosynthesisAmmoniaGene expressionProtein biosynthesisRNA MessengerAmino AcidsGeneAmino acid synthesisOligonucleotide Array Sequence Analysischemistry.chemical_classificationEthanolReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingRNA FungalGeneral MedicineYeastBiosynthetic PathwaysCulture MediaAmino acidGene Expression RegulationBiochemistrychemistryProtein BiosynthesisFermentationFermentationFEMS Yeast Research
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Characterization of the Viable but Nonculturable (VBNC) State in Saccharomyces cerevisiae

2013

The Viable But Non Culturable (VBNC) state has been thoroughly studied in bacteria. In contrast, it has received much less attention in other microorganisms. However, it has been suggested that various yeast species occurring in wine may enter in VBNC following sulfite stress.In order to provide conclusive evidences for the existence of a VBNC state in yeast, the ability of Saccharomyces cerevisiae to enter into a VBNC state by applying sulfite stress was investigated. Viable populations were monitored by flow cytometry while culturable populations were followed by plating on culture medium. Twenty-four hours after the application of the stress, the comparison between the culturable populat…

Saccharomyces cerevisiae ProteinsMicroorganismAnion Transport ProteinsSaccharomyces cerevisiaePopulationMutantlcsh:MedicineSaccharomyces cerevisiaeViable but nonculturableMicrobiologySulfiteslcsh:Scienceeducationeducation.field_of_studyMultidisciplinarybiologyCell Cyclelcsh:RHydrogen-Ion Concentrationbiology.organism_classificationYeastCulture MediaMolecular mechanismlcsh:QBacteriaResearch ArticlePLoS ONE
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The YJL185C, YLR376C and YJR129C genes of Saccharomyces cerevisiae are probably involved in regulation of the glyoxylate cycle

2006

The ER24 aci (acidification) mutant of Saccharomyces cerevisiae excreting protons in the absence of glucose was transformed with a multicopy yeast DNA plasmid library. Three different DNA fragments restored the wild-type phenotype termed Aci- because it does not acidify the complete glucose medium under the tested conditions. Molecular dissection of the transforming DNA fragments identified two multicopy suppressor genes YJL185C, YJR129C and one allelic YLR376C. Disruption of either of the three genes in wild-type yeast strain resulted in acidification of the medium (Aci+ phenotype) similarly to the original ER24 mutant. These data indicate the contribution of the ER24 gene product Ylr376Cp…

Saccharomyces cerevisiae ProteinsMutantSaccharomyces cerevisiaeGenes FungalGlyoxylate cycleAutophagy-Related ProteinsGlyoxylatesMethyltransferasesSaccharomyces cerevisiaeBiologyHydrogen-Ion Concentrationbiology.organism_classificationGeneral Biochemistry Genetics and Molecular BiologyYeastCulture MediaGene productchemistry.chemical_compoundPlasmidchemistryBiochemistryGenes SuppressorGeneDNAMetabolic Networks and Pathways
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Convergence of the target of rapamycin and the Snf1 protein kinase pathways in the regulation of the subcellular localization of Msn2, a transcriptio…

2002

The subcellular localization of Msn2, a transcriptional activator of STRE (stress response element)-regulated genes, is modulated by carbon source availability. In cells growing in glucose, Msn2 is located mainly in the cytosol, whereas in carbon source-starved cells, Msn2 is located largely inside the nucleus. However, in cells lacking Reg1 (the regulatory subunit of the Reg1/Glc7 protein phosphatase complex), the regulation of subcellular distribution is absent, Msn2 being constitutively present in the cytosol. The localization defect in these mutants is specific for carbon starvation stress, and it is because of the presence of an abnormally active Snf1 protein kinase that inhibits the n…

Saccharomyces cerevisiae ProteinsRecombinant Fusion ProteinsSaccharomyces cerevisiaeMitogen-activated protein kinase kinaseBiologyProtein Serine-Threonine KinasesBiochemistryASK1Molecular BiologyDNA PrimersSirolimusMAP kinase kinase kinaseBase SequenceKinaseCell BiologySubcellular localizationCarbonCell biologyCulture MediaDNA-Binding ProteinsCytosolBiochemistryTrans-ActivatorsCyclin-dependent kinase 9Nuclear localization sequenceSubcellular FractionsTranscription FactorsThe Journal of biological chemistry
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Monitoring Stress-Related Genes during the Process of Biomass Propagation of Saccharomyces cerevisiae Strains Used for Wine Making

2005

ABSTRACT Physiological capabilities and fermentation performance of Saccharomyces cerevisiae strains to be employed during industrial wine fermentations are critical for the quality of the final product. During the process of biomass propagation, yeast cells are dynamically exposed to a mixed and interrelated group of known stresses such as osmotic, oxidative, thermic, and/or starvation. These stressing conditions can dramatically affect the parameters of the fermentation process and the technological abilities of the yeast, e.g., the biomass yield and its fermentative capacity. Although a good knowledge exists of the behavior of S. cerevisiae under laboratory conditions, insufficient knowl…

Saccharomyces cerevisiae ProteinsSaccharomyces cerevisiaeBiomassWineSaccharomyces cerevisiaeOxidative phosphorylationApplied Microbiology and BiotechnologyOsmotic PressureGene Expression Regulation FungalOsmotic pressureBiomassFood scienceWineEcologybiologybusiness.industryfood and beveragesPhysiology and Biotechnologybiology.organism_classificationYeastCulture MediaBiotechnologyOxidative StressYeast in winemakingFermentationFermentationbusinessHeat-Shock ResponseFood ScienceBiotechnologyApplied and Environmental Microbiology
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There is a steady-state transcriptome in exponentially growing yeast cells

2010

The growth of yeast cells in batches in glucose-based media is a standard condition in most yeast laboratories. Most gene expression experiments are done by taking this condition as a reference. Presumably, cells are in a stable physiological condition that can be easily reproduced in other laboratories. With this assumption, however, it is necessary to consider that the average amount of the mRNAs per cell for most genes does not change during exponential growth. That is to say, there is a steady-state condition for the transcriptome. However, this has not been rigorously demonstrated to date. In this work we take several cell samples during the exponential phase growth to perform a kineti…

Saccharomyces cerevisiaeBioengineeringMycologySaccharomyces cerevisiaeApplied Microbiology and BiotechnologyBiochemistrySaccharomycesGenètica molecularTranscriptomeSaccharomycesTranscripció genèticaExponential growthGene expressionGeneticsRNA MessengerGeneticsbiologyGene Expression ProfilingPhysiological conditionRNA Fungalbiology.organism_classificationYeastCulture MediaCell biologyGene expression profilingRNABiotechnologyYeast
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