Search results for "DAS"
showing 10 items of 4164 documents
The Eurasian Modern Pollen Database (EMPD), version 2
2020
The Eurasian (née European) Modern Pollen Database (EMPD) was established in 2013 to provide a public database of high-quality modern pollen surface samples to help support studies of past climate, land cover, and land use using fossil pollen. The EMPD is part of, and complementary to, the European Pollen Database (EPD) which contains data on fossil pollen found in Late Quaternary sedimentary archives throughout the Eurasian region. The EPD is in turn part of the rapidly growing Neotoma database, which is now the primary home for global palaeoecological data. This paper describes version 2 of the EMPD in which the number of samples held in the database has been increased by 60% from 4826 to…
CRISPR-mediated strand displacement logic circuits with toehold-free DNA
2021
DNA nanotechnology, and DNA computing in particular, has grown extensively over the past decade to end with a variety of functional stable structures and dynamic circuits. However, the use as designer elements of regular DNA pieces, perfectly complementary double strands, has remained elusive. Here, we report the exploitation of CRISPR-Cas systems to engineer logic circuits based on isothermal strand displacement that perform with toehold-free double-stranded DNA. We designed and implemented molecular converters for signal detection and amplification, showing good interoperability between enzymatic and nonenzymatic processes. Overall, these results contribute to enlarge the repertoire of su…
Extended haplodiploidy hypothesis
2019
P.R., M.P., and H.H. were supported by Academy of Finland (grant 258385 to M.P., grant 135970 to H.H., and 252411 to the Centre of Excellence in Biological Interactions), P.R. also by the Royal Society Newton International Fellowship, and H.H. also by the Kone Foundation. Evolution of altruistic behavior was a hurdle for the logic of Darwinian evolution. Soon after Hamilton formalized the concept of inclusive fitness, which explains how altruism can evolve, he suggested that the high sororal relatedness brought by haplodiploidy could be why Hymenopterans have a high prevalence in eusocial species, and why helpers in Hymenoptera are always female. Later it was noted that in order to capitali…
Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…
2020
Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…
Optimization of the enzyme power source for a nano drug delivery system fuelled by glucose in blood plasma
2019
A unique in vivo electrical pulse generator to improve membrane permeability for drugs and simultaneously facilitate self-powered nano devices for nano drug delivery systems (NDDS) was identified. The use of an unsupported biological catalyst component of the power supply was aimed at the NDDS instead of a conventional membrane electrode assembly (MEA). Self-powered carriers of drugs and prodrugs with improved controlled release capability to target areas using substrate available in biological matrices such as glucose in blood is envisaged. The experimental application implemented prototype designed chambers allowing the entry of premixed precursors and low ohm resistance due the absence o…
The challenge of habitat modelling for threatened low density species using heterogeneous data: The case of Cuvier’s beaked whales in the Mediterrane…
2018
We are grateful to the ACCOBAMS Secretariat for their support in this work, including a small grant for the analysis. The Mediterranean population of Cuvieŕs beaked whale (Ziphius cavirostris), a deep-diving cetacean, is genetically distinct from the Atlantic, and subject to a number of conservation threats, in particular underwater noise. It is also cryptic at the surface and relatively rare, so obtain robust knowledge on distribution and abundance presents unique challenges. Here we use multiplatform and multiyear survey data to analyse the distribution and abundance of this species across the Mediterranean Sea. We use a novel approach combining heterogeneous data gathered with different …
Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental space
2018
Heterogeneous data collection in the marine environment has led to large gaps in our knowledge of marine species distributions. To fill these gaps, models calibrated on existing data may be used to predict species distributions in unsampled areas, given that available data are sufficiently representative. Our objective was to evaluate the feasibility of mapping cetacean densities across the entire Mediterranean Sea using models calibrated on available survey data and various environmental covariates. We aggregated 302,481 km of line transect survey effort conducted in the Mediterranean Sea within the past 20 years by many organisations. Survey coverage was highly heterogeneous geographicall…
Regulation of plant NADPH oxidase.
2007
Addendum to: Regulation of Reactive Oxygen Species Production by a 14-3-3 Protein in Elicited Tobacco Cells. T. Elmayan, J. Fromentin, C. Riondet, G. Alcaraz, J. Blein and F. Simon-Plas. Plant Cell Environ 2007; 30:722–32; International audience; The production of Reactive Oxygen Species (ROS) is one of the key events occurring during the response of plants to environmental changes, and contributing to establish adaptive signaling pathways. A plasma membrane bound NADPH oxidase enzyme has been evidenced as the ROS producing system in various plant‑microorganisms interactions. We very recently reported, that a protein of the 14‑3‑3 family was able to interact directly with the C‑terminus par…
Fresh-cut storage of fruit and fresh-cuts affects the behaviour of minimally processed Big Bang nectarines ( Prunus persica L. Batsch) during shelf l…
2018
Abstract Nectarine can be minimally processed to successfully produce ready-to-eat fresh-cuts fruit. The aim of this work was to study the combined effect of the ripening stage of cold stored fruit before processing and the length of the storage period of fresh-cut slices after minimal processing, on the behaviour of minimally processed “Big Bang” nectarines during shelf life. ‘Big Bang’nectarine slices obtained from fruit stored at 1 ± 0.5 °C (RH = 90%) for 1 d, 10 d and 15 d were stored for 0, 3, 5, 7, 12 d. at 5 °C. At the end of each storage period, visual quality, color (L*, a* and b*), phenols and carothenoids content, TSS, TA were measured together with in-package CO2 and O2. Despite…
Functional and Pharmacological Analyses of the Role of Penicillium digitatum Proteases on Virulence
2019
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