Search results for "DGGE"

Changes in chemical and biological soil properties as induced by anthropogenic disturbance: A case study of an agricultural soil under recurrent floo…

2006

Abstract Monitoring the environmental impact of anthropogenic disturbance on soil ecosystem is of great importance for optimizing strategies for soil use, conservation and remediation. The aim of this study was to assess whether and to what extent a long-term, human-induced disturbance could have affected main chemical and biological properties in an agricultural soil. The study site was a hazel (Corylus avellana L.) orchard located in the area surrounding the volcanic apparatus of Somma-Vesuvius (Southern Italy). For the last two decades, the site has been repeatedly subjected to floodings by wastewaters containing not only alluvial sediments but also potentially hazardous compounds from i…

Characterization in the archaeological excavation site of heterotrophic bacteria and fungi of deteriorated wall painting of Herculaneum in Italy

2011

Microbiological characterization of frescos in four different locations (Collegio degli Augustali, Casa del Colonnato Tuscanico, Casa dello Scheletro and Casa del Gran Portale) of excavation sites of Herculaneum was carried out. The use of infrared thermography allowed detecting sample points on frescos with greatest moisture not visible to the naked eye, resulting in structural damage. The microclimatic conditions provided perfect habitat for bacteria and fungi, particularly of spore forming and mould. In fact, heterotrophic bacteria were prevalent in all wall paintings monitored (ranging from 18 +/- 2 CFU 100 cm(-2) to 68 +/- 4 CFU 100 cm(-2)), whereas fungi were also detected but at lowe…

Combination of multiplex PCR and PCR-DGGE for monitoring common sourdough-associated Lactobacillus species

2006

A combination of denaturing gradient gel electrophoresis (DGGE) and a previously described multiplex PCR approach was employed to detect sourdough lactobacilli. Primers specific for certain groups of Lactobacillus spp. were used to amplify fragments, which were analyzed by DGGE. DGGE profiles obtained from Lactobacillus type strains acted as standards to analyze lactobacilli from four regional Abruzzo (central Italy) sourdoughs.

Microbial analysis of raw cows' milk used for cheese-making: influence of storage treatments on microbial composition and other technological traits

2010

Raw milk used to produce Grana cheese was subjected to several treatment regimes, including varying temperatures and storage times. Milk from morning and evening milking were transferred to a dairy factory sepa- rately (double delivery) or together (single delivery), after storage at the farm for 12 h; in the former case, milk was stored at 12 or 8°C, whereas, in the latter, it was kept at ambient temperature or 18°C. Values of pH of the vat milk were lower for milk samples kept at room temperature, while other physico-chemical parameters and rheological characteristics tested did not show significant differ- ences linked to the different storage temperatures of milk used for ‘‘Grana Trenti…

Intrinsic bioremediation potential of a chronically polluted marine coastal area.

2015

A microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically polluted marine coastal area, was carried out in order to discern its intrinsic bioremediation potential. Microbiological analysis, 16S rDNA-based DGGE fingerprinting and PLFAs analysis were performed on seawater and sediment samples from six stations on two transects. Higher diversity and variability among stations was detected by DGGE in sediment than in water samples although seawater revealed higher diversity of culturable hydrocarbon-degrading bacteria. The most polluted sediment hosted higher total bacterial diversity and higher abundance and diversity of culturable HC degraders. Alkane- an…

BIODEGRADAZIONE DEGLI IDROCARBURI: DALLE COMUNITÀ MICROBICHE MARINE AI SISTEMI READY TO USE PER IL BIORISANAMENTO

Crude oil is one of the major hazardous pollutants. A promising technology for the treatment of contaminated sites is based on biodegradation of oil pollutants by microbial populations. Several microorganisms are known to use hydrocarbons as carbon sources. In the marine environment, obligate hydrocarbonoclastic bacteria (BIC) have been defined as being ecologically important for the aerobic removal of hydrocarbons. Recent advances in microbial ecology make it possible to combine molecular and culture-dependent approaches to identify bacterial community at environmental sites. In this thesis a microbiological survey of the Priolo Bay (eastern coast of Sicily, Ionian Sea), a chronically poll…

Soil solarization with biodegradabile materials and its impact on soil microbial communities.

2008

Soil solarization (SS) seems one of the most promising techniques to control soilborne pathogens, but an important limitation to the diffusion of this technique is due to the drawback regarding the disposal of the used plastic materials. A possible solution to this problem is the use of biodegradable plastics. The aim of this study was compare the impact of SS with biodegradable materials with SS with plastic film and others pest management techniques (i.e. organic matter amendment, calcium cyanamide and Dazomet fungicide application) on crop productivity, soilborne disease incidence, weed suppression, and soil chemical (total N, ammonium, nitrate, available phosphorus, organic matter, hydr…

La Betulla dell’Etna: uno studio multidisciplinare sui fattori di deperimento della specie

2018

La betulla dell’Etna (Betula aetnensis Rafin), è una delle specie arboree che durante le ultime glaciazioni si è spinta verso sud e dove oggi costituisce popolazioni pressoché relitte localizzate esclusivamente in Sicilia sulla sommità dell’Etna. I betulleti sono presenti sui versanti orientali ed occidentali dell’Etna, ad un’altitudine compresa tra 1.400 e 2.000 m s.l.m. Si tratta di popolamenti pionieri che colonizzano substrati vulcanici inalterati e/o poco evoluti dove costituiscono a volte dei piccoli boschi puri o misti a pino laricio. Questi boschi in passato erano sottoposti a ceduazioni, che dal 1987 non sono state più eseguite a seguito della istituzione del Parco Regionale dell’E…

ANALISI DELLE POPOLAZIONI MICROBICHE RICORRENTI NEL MIELE

2014

The occurrence of mycorrhizal fungi in Betula aetnensis Raf. roots: from ecological role to conservation strategies

2017

Betula aetnensis Raf. is an endemic tree species of particular conservation value. It only thrives in the north-eastern slopes of Mount Etna (Sicily), from 1200 to 2100 m a.s.l. This pioneer plant is able to begin primary succession on nutrient-poor and water-limited soils (C = 0.17%; N = 0.05 ‰; P2O5 = 4.1 ppm), where beneficial mycorrhizal fungi (MF) may play a crucial role. In order to investigate MF role in B. aetnensis, plant roots from natural sites and nursery grown specimens were analyzed for both ectomycorrhizal and endomycorrhizal structures. Typical structures of both symbiosis were detected by root staining and morphological observations. Ectomycorrhizae (EM) were more abundant …