Search results for "Data"

showing 10 items of 12992 documents

Improving the conservation of Mediterranean Chondrichthyans : the ELASMOMED DNA barcode reference library

2017

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample …

0106 biological sciencesHeredityMolecular biologySpeciationBiodiversitySettore BIO/05 - Zoologialcsh:MedicineJuvenileEvolutionary biologyBarcodeBiochemistry01 natural sciencesDNA barcodinglaw.inventionlawDNA librarieslcsh:ScienceChondrichthyesSpecimens IdentificationData ManagementMolecular systematicsMultidisciplinaryGeographyMediterranean RegionEcologyCryptic speciationFishesBiodiversityMorphological stasiMitochondrial DNANucleic acidsGenetic MappingPhylogeographyBiogeographyDNA Barcode Reference LibraryDNA barcoding TaxonomicVertebratesDNA data banksResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEvolutionary ProcessesEvolutionary systematicsBarcoding Chondrichthyans Conservation Mediterranean Sea mtDNACartilaginous fishConservationBiologyPhylogeographic structure010603 evolutionary biologyMolecular taxonomySpecies SpecificityEndemic SpeciesGeneticsMediterranean SeaAnimalsDNA Barcoding TaxonomicDNA barcoding14. Life underwaterEndemismTaxonomyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNAResearch and analysis methodsPhylogeographyMolecular biology techniquesTaxonHaplotypesThreatened speciesEarth SciencesSharksConservation statuslcsh:QPopulation GeneticsMarine biodiversity conservationElasmobranchii
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Type-2 histone deacetylases as new regulators of elicitor-induced cell death in plants

2011

 voir Addenda, notes additionnelles complétant l'article : "Dahan, J., Hammoudi, V., Wendehenne, D., Bourque, S. (2011). Type 2 histone deacetylases play a major role in the control of elicitor-induced cell death in tobacco. Plant signaling & behavior, 6 (11), 1865-1867. DOI : 10.4161/psb.6.11.17848".; International audience; Plant resistance to pathogen attack is often associated with a localized programmed cell death called hypersensitive response (HR). How this cell death is controlled remains largely unknown. Upon treatment with cryptogein, an elicitor of tobacco defence and cell death, we identified NtHD2a and NtHD2b, two redundant isoforms of type-2 nuclear histone deacetylases (HDACs…

0106 biological sciencesHypersensitive responseProgrammed cell deathPhysiologyplant defenceNicotiana tabacum[SDV]Life Sciences [q-bio]Molecular Sequence DataHistone Deacetylase 2Plant Science01 natural sciencesMass SpectrometrycryptogeinFungal Proteins03 medical and health sciences[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyTobaccoAmino Acid SequencePhosphorylationNuclear proteinPhylogeny030304 developmental biology0303 health sciencesbiologyNicotiana tabacumAlgal ProteinsNuclear Proteinsfood and beveragesAcetylationbiology.organism_classificationElicitorCell biologyHistonecell deathhypersensitive response (HR)Acetylationhistone deacetylasebiology.proteinHistone deacetylasePeptidesSequence AlignmentChromatography Liquid010606 plant biology & botanynuclear signalling
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Inferring individual fate from aquatic acoustic telemetry data

2020

13 pages, 8 figures, 1 table.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

0106 biological sciencesInformation retrievalSurvivalComputer science010604 marine biology & hydrobiologyEcological ModelingFateNatural mortalityPredationDispersalVDP::Matematikk og Naturvitenskap: 400Creative commonsFishing mortality010603 evolutionary biology01 natural sciencesTelemetryTable (database)Acoustic telemetry14. Life underwaterLicenseFish behaviourEcology Evolution Behavior and Systematics
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European Vegetation Archive (EVA): an integrated database of European vegetation plots

2015

Biurrun, Idoia/0000-0002-1454-0433; Rojo, Maria Pilar Rodriguez/0000-0001-5449-9386; Ermakov, Nikolai/0000-0001-7550-990X; De Sanctis, Michele/0000-0002-7280-6199; Svenning, Jens-Christian/0000-0002-3415-0862; Virtanen, Risto/0000-0002-8295-8217; Agrillo, Emiliano/0000-0003-2346-8346; Onyshchenko, Viktor/0000-0001-9079-7241; Marceno, Corrado/0000-0003-4361-5200; Willner, Wolfgang/0000-0003-1591-8386; Fernandez-Gonzalez, Federico/0000-0003-1234-4065; Jansen, Florian/0000-0002-0331-5185; Swacha, Grzegorz/0000-0002-6380-2954; Dengler, Jurgen/0000-0003-3221-660X; Guarino, Riccardo/0000-0003-0106-9416; Sopotlieva, Desislava/0000-0002-9281-7039; Venanzoni, Roberto/0000-0002-7768-0468; Chytry, Mil…

0106 biological sciencesInternational Association for Vegetation ScienceBos- en LandschapsecologieEcoinformatic01 natural sciencesEcoinformaticsForest and Landscape EcologyVegetacióEcologyEcologyEnvironmental resource managementPE&RCVegetation plotEuropeCentralized databaseGeographyCartografia de la vegetacióPlantenecologie en NatuurbeheerVegetatie Bos- en Landschapsecologiemedicine.symptomGeographic coordinate systemEuropaRelevePlant Ecology and Nature ConservationEuropean Vegetation SurveyManagement Monitoring Policy and LawBiodiversity informatics010603 evolutionary biologyPlot (graphics)Biodiversity informaticsRelevéDatabaseEcoinformaticsPhytosociological dataBiodiversity informatics; Database; Ecoinformatics; European Vegetation Survey; International Association for Vegetation Science; Phytosociological data; Relevé; Vegetation database; Vegetation plotmedicinebiodiversity informatics; database; ecoinformatics; european vegetation survey; international association for vegetation science; phytosociological data; relevé; vegetation database; vegetation plot; ecology; nature and landscape conservation; management; monitoring; policy and lawVegetatieNature and Landscape ConservationVegetation mappingVegetationbusiness.industry15. Life on landDefensieTaxonVegetation databaseBiodiversity informaticIntegrated databaseVegetation Forest and Landscape EcologybusinessVegetation (pathology)010606 plant biology & botany
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A bark beetle infestation predictive model based on satellite data in the frame of decision support system TANABBO

2020

The European spruce bark beetle Ips typographus L. causes significant economic losses in managed coniferous forests in Central and Northern Europe. New infestations either occur in previously undisturbed forest stands (i.e., spot initiation) or depend on proximity to previous years’ infestations (i.e., spot spreading). Early identification of newly infested trees over the forested landscape limits the effective control measures. Accurate forecasting of the spread of bark beetle infestation is crucial to plan efficient sanitation felling of infested trees and prevent further propagation of beetle-induced tree mortality. We created a predictive model of subsequent year spot initiation and spo…

0106 biological sciencesIps typographusDecision support systemBark beetlemedicine.disease_causeFelling01 natural sciencesgisbark beetle infestationSatellite dataInfestationmedicinelcsh:ForestryDigital elevation modelNature and Landscape ConservationkovakuoriaisetEcologybiologyForestryForestryNorway Spruce04 agricultural and veterinary sciencesVegetationspatial predictive modelbiology.organism_classificationGISroc curvemetsäekosysteemitGeographyROC Curvenorway spruce040103 agronomy & agriculture0401 agriculture forestry and fisherieslcsh:SD1-669.5010606 plant biology & botany
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Unsupervised Classification of Acoustic Echoes from Two Krill Species in the Southern Ocean (Ross Sea)

2021

This work presents a computational methodology able to automatically classify the echoes of two krill species recorded in the Ross sea employing scientific echo-sounder at three different frequencies (38, 120 and 200 kHz). The goal of classifying the gregarious species represents a time-consuming task and is accomplished by using differences and/or thresholds estimated on the energy features of the insonified targets. Conversely, our methodology takes into account energy, morphological and depth features of echo data, acquired at different frequencies. Internal validation indices of clustering were used to verify the ability of the clustering in recognizing the correct number of species. Th…

0106 biological sciencesKrillbiologybusiness.industry010604 marine biology & hydrobiologyEuphausiaSettore MAT/01 - Logica MatematicaEuphausia crystallorophiasbiology.organism_classificationSpatial distributionMachine learning for pelagic species classification01 natural sciencesKrill identification010104 statistics & probabilityRoss SeaAcoustic dataArtificial intelligence0101 mathematicsCluster analysisbusinessRelative species abundanceGeologyEnergy (signal processing)Global biodiversityRemote sensing
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The Eurasian Modern Pollen Database (EMPD), version 2

2020

The Eurasian (née European) Modern Pollen Database (EMPD) was established in 2013 to provide a public database of high-quality modern pollen surface samples to help support studies of past climate, land cover, and land use using fossil pollen. The EMPD is part of, and complementary to, the European Pollen Database (EPD) which contains data on fossil pollen found in Late Quaternary sedimentary archives throughout the Eurasian region. The EPD is in turn part of the rapidly growing Neotoma database, which is now the primary home for global palaeoecological data. This paper describes version 2 of the EMPD in which the number of samples held in the database has been increased by 60% from 4826 to…

0106 biological sciencesLAKE CONSTANCE REGIONPalynology Palaeoecology Palaeoclimatology010504 meteorology & atmospheric sciencesHUMAN IMPACTrecent pollen deposition580 Plants (Botany)medicine.disease_cause01 natural sciences2417.10 Paleobotánicarecent pollen deposition[SDV.SA.SF]Life Sciences [q-bio]/Agricultural sciences/Silviculture forestryddc:550SURFACE POLLENSOUTHERN NORWAYSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSlcsh:Environmental sciencesSDG 15 - Life on Landlcsh:GE1-3500303 health sciencesCLIMATE-CHANGEGEAPUSENI NATURAL PARKlcsh:QE1-996.5Foundation (engineering)European pollen database[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]EuropeLAST GLACIAL MAXIMUMGeographyNORTHERN IBERIAN PLATEAUpollenGE Environmental Sciences1171 Geosciences010506 paleontology[SDE.MCG]Environmental Sciences/Global ChangesEarth and Planetary Sciences(all)Library scienceClimate change[SDU.STU]Sciences of the Universe [physics]/Earth Sciences010603 evolutionary biologypollen; Europe; European pollen database; neotoma03 medical and health sciencesEurasian Modern Pollen Database2502.05 PaleoclimatologíaneotomaPollenmedicineSIERRA-NEVADA[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environment0105 earth and related environmental sciences030304 developmental biologyBotánicaHOLOCENE VEGETATION HISTORYDAS15. Life on land2416.03 Palinología[SDE.ES]Environmental Sciences/Environmental and Societylcsh:Geology[SDU]Sciences of the Universe [physics]MCPGeneral Earth and Planetary Sciences[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Notulae to the Italian flora of algae, bryophytes, fungi and lichens: 2

2016

In this contribution, new data concerning red algae, lichens and bryophytes of the Italian flora are presented. It includes new records and confirmations for the algal genus Grateloupia, the bryophyte genus Didymodon, and the lichen genera Buellia, Cladonia, Letharia, Pertusaria, and Pyrenula.

0106 biological sciencesLichenized ascomyceteFlorabiologyEcology010604 marine biology & hydrobiologyPlant Sciencebiology.organism_classification01 natural sciencesRhodophyceaeBryidaelcsh:QK1-989Bryidae floristic data lichenized ascomycetes Rhodophyceaefloristic dataAlgaelcsh:BotanyBotanylichenized ascomycetesLichenEcology Evolution Behavior and Systematics010606 plant biology & botanyItalian Botanist
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The Ectocarpus genome and the independent evolution of multicellularity in brown algae

2010

Brown algae (Phaeophyceae) are complex photosynthetic organisms with a very different evolutionary history to green plants, to which they are only distantly related. These seaweeds are the dominant species in rocky coastal ecosystems and they exhibit many interesting adaptations to these, often harsh, environments. Brown algae are also one of only a small number of eukaryotic lineages that have evolved complex multicellularity (Fig. 1). We report the 214 million base pair (Mbp) genome sequence of the filamentous seaweed Ectocarpus siliculosus (Dillwyn) Lyngbye, a model organism for brown algae, closely related to the kelps (Fig. 1). Genome features such as the presence of an extended set of…

0106 biological sciencesLineage (evolution)Molecular Sequence DataPhaeophyta01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesAlgae[SDV.BDD] Life Sciences [q-bio]/Development BiologyBotanyBIOLOGIE CELLULAIREAnimals14. Life underwater[SDV.BDD]Life Sciences [q-bio]/Development Biologyflore marinePhylogenyOrganismComputingMilieux_MISCELLANEOUSphéophycées030304 developmental biology0303 health sciencesGenomeMultidisciplinarybiologyEctocarpus siliculosusAlgal ProteinsEukaryotaPigments BiologicalEctocarpus15. Life on landbiology.organism_classificationBiological EvolutionBrown algaeMulticellular organismEvolutionary biologyalgues brunesBiologieSignal Transduction010606 plant biology & botany
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Activation of a nuclear-localized SIPK in tobacco cells challenged by cryptogein, an elicitor of plant defence reactions.

2009

When a plant cell is challenged by a well-defined stimulus, complex signal transduction pathways are activated to promote the modulation of specific sets of genes and eventually to develop adaptive responses. In this context, protein phosphorylation plays a fundamental role through the activation of multiple protein kinase families. Although the involvement of protein kinases at the plasma membrane and cytosolic levels are now well-documented, their nuclear counterparts are still poorly investigated. In the field of plant defence reactions, no known study has yet reported the activation of a nuclear protein kinase and/or its nuclear activity in plant cells, although some protein kinases, e.…

0106 biological sciencesMAPK/ERK pathwayMolecular Sequence DataActive Transport Cell NucleusBiology01 natural sciencesBiochemistryMAP2K703 medical and health sciencesCytosolTobaccoASK1Protein phosphorylation[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceNuclear proteinProtein kinase AMolecular BiologyConserved Sequence030304 developmental biologyPlant ProteinsCell Nucleus0303 health sciencesKinasePlant ExtractsAlgal ProteinsLife SciencesCell BiologyCell biologyEnzyme ActivationBiochemistrySignal transductionMitogen-Activated Protein KinasesSequence Alignment010606 plant biology & botanySignal TransductionThe Biochemical journal
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