Search results for "Dehydropeptide"

showing 6 items of 16 documents

Coordination ability of pentapeptides with two dehydro-amino acid residues inserted into their sequences.

2004

The study on the binding ability of tested ligands have shown that insertion of two dehydro-amino acid residues into peptide sequences makes them more effective in metal ion binding than ligands with one dehydro-amino acid residue. The ligand with two Z(Delta)Phe residue form more stable complexes than his analogues with one Z(Delta)Phe residue. Interesting is this that position of Z(Delta)Phe residue in peptide chain have impact on Cu(II)-complexes formation.

chemistry.chemical_classificationIonsModels MoleculardehydropeptideChemistryStereochemistryLigandPeptideLigandsBiochemistryCu(II) ionInorganic ChemistryMetalResidue (chemistry)Binding abilityMetalsvisual_artvisual_art.visual_art_mediumOrganic chemistryAmino Acid SequenceAmino acid residueAmino AcidsPeptidescomplexProtein BindingJournal of inorganic biochemistry
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Synthesis of dehydrodipeptide esters and their evaluation as inhibitors of cathepsin C

2015

The procedures for the synthesis of esters of dehydropeptides containing C-terminal (Z)-dehydrophenylalanine and dehydroalanine have been elaborated. These esters appeared to be moderate or weak inhibitors of cathepsin C, with some of them exhibiting slow-binding behavior. As shown by molecular modeling, they are rather bound at the surface of the enzyme and are not submersed in its binding cavities. Electronic supplementary material The online version of this article (doi:10.1007/s00044-015-1366-0) contains supplementary material, which is available to authorized users.

chemistry.chemical_classificationMolecular modelmolecular modelingesterificationenzyme inhibitorsPharmacology toxicologyOrganic ChemistryhumanitiesCathepsin Cchemistry.chemical_compoundPharmacology Toxicology and Pharmaceutics(all)EnzymedehydropeptideschemistryBiochemistryDehydroalanineGeneral Pharmacology Toxicology and PharmaceuticsOriginal ResearchMedicinal Chemistry Research
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Conformation of dehydropentapeptides containing four achiral amino acid residues - controlling the role of L-valine.

2014

Structural studies of pentapeptides containing an achiral block, built from two dehydroamino acid residues (ΔZPhe and ΔAla) and two glycines, as well as one chiral L-Val residue were performed using NMR spectroscopy. The key role of the L-Val residue in the generation of the secondary structure of peptides is discussed. The obtained results suggest that the strongest influence on the conformation of peptides arises from a valine residue inserted at the C-terminal position. The most ordered conformation was found for peptide Boc-Gly-ΔAla-Gly-ΔZPhe-Val-OMe (3), which adopts a right-handed helical conformation.

chemistry.chemical_classificationconformationdehydropeptideChemistryStereochemistryOrganic ChemistryPeptideNuclear magnetic resonance spectroscopydehydroalaninedehydrophenylalanineFull Research PaperNMRlcsh:QD241-441Residue (chemistry)chemistry.chemical_compoundChemistrylcsh:Organic chemistryDehydroalanineValinelcsh:QAmino acid residuelcsh:ScienceProtein secondary structureBeilstein journal of organic chemistry
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Conformational investigation of α,β‐dehydropeptides Part VI. Molecular and crystal structure of benzyloxycarbonylglycyl‐(Z )‐dehydrophenylalanine

1994

The structure of a peptide containing C-terminal dehydrophenylalanine, Z-Gly-(Z)-delta Phe (C19H18N2O5, MW = 354) was determined from single-crystal X-ray diffraction data. Needle-shaped crystals were grown from a 1:1 mixture of methanol-acetone in the monoclinic space group P2(1) with a = 14.717(4), b = 4.941(2), c = 12.073(4) A, beta = 103.72(4) degrees; V = 852.86(8) A3, Z = 2 and Dc = 1.32 g cm-3. The structure was solved by direct methods using SHELXS-86 and refined to a final R-index of 0.032 for 1714 observed reflections. The peptide adopts a conformation folded at the glycine residue, and principal torsion angles are omega 0 = -167.6(2) degrees, phi 1 = -71.8(3) degrees, psi 1 = -31…

conformationdehydropeptidehydrogen bondProtein ConformationChemistryHydrogen bondhelical conformersIntermolecular forceDipeptidesCrystal structuredehydrophenylalanineBiochemistryZ‐Gly‐(Z )‐APheCrystallographyProtein structureX-Ray DiffractionIntramolecular forceSpectroscopy Fourier Transform InfraredX-ray crystallographyMoleculeinfrared spectroscopyX‐ray structure analysisMonoclinic crystal systemInternational Journal of Peptide and Protein Research
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Kinetics of photochemical isomerization of TFA-Gly-ZΔPhe into TFA-Gly-EΔPhe

2017

The kinetics of photoisomerization of trifluoroacetyl-(Z)-dehydrophenylalanylglycine into trifluoroacetyl-(E)- dehydrophenylalanylglycine was studied in the hope that light-induced reaction could be useful as a means of preparation of the E-dehydropeptides. The obtained results indicate that if this reaction carried out under irradiation with light of wavelength 360 nm it is practically irreversible and gave nearly quantitatively pure Eisomer Significantly, expected cyclic side-products were not observed in the reaction mixture, thus proving the preparative potential of the elaborated procedure.

lcsh:QD241-441dehydropeptideslcsh:Organic chemistryChemistryE-Z isomersOrganic ChemistryKineticsphotoisomerizationreaction kineticsPhotochemistryIsomerizationNMRArkivoc
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Synthesis of Hybrid Tripeptide Peptidomimetics Containing Dehydroamino Acid and Aminophosphonic Acid in the Chain and Evaluation of Their Activity to…

2021

Synthesis of a new group of hybrid phosphonodehydropeptides composed of glycyl-(Z)-dehydrophenylalanine and structurally variable aminophosphonates alongside with investigations of their activity towards cathepsin C are presented. Obtained results suggest that the introduction of (Z)- dehydrophenylalanine residue into the short phosphonopeptide chain does induce the ordered conformation. Investigated peptides appeared to act as weak or moderate inhibitors of cathepsin C.

phosphonopeptidesmolecular modelingMolecular ConformationBioengineeringGeneral ChemistryGeneral MedicineBiochemistryCathepsin Cdehydropeptidesstructure-activity relationinhibitorsMolecular MedicinePeptidomimeticsDPPIPeptidesMolecular BiologyChemistry & Biodiversity
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