Search results for "Demosponge"

showing 10 items of 42 documents

Crystalline nanorods as possible templates for the synthesis of amorphous biosilica during spicule formation in Demospongiae.

2009

In tandem: High-resolution TEM shows that during the initial stages of demosponge spicule formation, a primordial crystalline structure is formed within the axial filament. The recently developed electron diffraction tomography technique (ADT) reveals that the nanorods have a layered structure that matches smectitic phyllosilicates. These intracellular nanorods have been considered as precursors of mature spicules. High-resolution microscopy shows that, during the initial stages of demosponge spicule formation, a primordial crystalline structure is formed within the axial filament. The recently developed electron diffraction tomography technique reveals that the nanorods have a layered stru…

SpiculeMaterials scienceElectronsCrystal structureBiochemistrybioinorganic chemistryDemospongeSponge spiculeMicroscopy Electron TransmissionX-Ray DiffractionnanostructuresAnimalsMolecular BiologyNanotubesbiologyElectron crystallographysilicateinOrganic Chemistrybioinorganic chemistry; electron crystallography; nanostructures; silicatein; spiculesbiology.organism_classificationSilicon DioxidespiculesAmorphous solidPoriferaCrystallographyelectron crystallographyElectron diffractionMicroscopy Electron ScanningMolecular MedicineNanorodChembiochem : a European journal of chemical biology
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Identification of a silicatein(-related) protease in the giant spicules of the deep-sea hexactinellid Monorhaphis chuni.

2008

SUMMARYSilicateins, members of the cathepsin L family, are enzymes that have been shown to be involved in the biosynthesis/condensation of biosilica in spicules from Demospongiae (phylum Porifera), e.g. Tethya aurantium and Suberites domuncula. The class Hexactinellida also forms spicules from this inorganic material. This class of sponges includes species that form the largest biogenic silica structures on earth. The giant basal spicules from the hexactinellids Monorhaphis chuni and Monorhaphis intermedia can reach lengths of up to 3 m and diameters of 10 mm. The giant spicules as well as the tauactines consist of a biosilica shell that surrounds the axial canal, which harbours the axial f…

SpiculePhysiologyOceans and SeasMolecular Sequence DataAquatic ScienceCysteine Proteinase InhibitorsCathepsin LDemospongeSponge spiculeAnimalsAmino Acid SequenceTethya aurantiumMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyBinding SitesbiologyHexactinellidAnimal StructuresAnatomybiology.organism_classificationCathepsinsCystatinsPoriferaSuberites domunculaMolecular WeightSpongeBiochemistryInsect ScienceMolecular Probesbiology.proteinAnimal Science and ZoologyProtein Processing Post-TranslationalThe Journal of experimental biology
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Involvement of aquaporin channels in water extrusion from biosilica during maturation of sponge siliceous spicules.

2015

Aquaporins are a family of small, pore-forming, integral cell membrane proteins. This ancient protein family functions as water channels and is found in all kingdoms (including archaea, eubacteria, fungi, plants, and animals). We discovered that in sponges aquaporin plays a novel role during the maturation of spicules, their skeletal elements. Spicules are synthesized enzymatically via silicatein following a polycondensation reaction. During this process, a 1:1 stoichiometric release of water per one Si-O-Si bond formed is produced. The product of silicatein, biosilica, is a fluffy, soft material that must be hardened in order to function as a solid rod. Using the model of the demosponge sp…

SpiculeProtein familyAquaporinWaterBiologybiology.organism_classificationAquaporinsSilicon DioxideCell biologyPoriferaSuberites domunculaSpongeDemospongeSponge spiculeComplementary DNABotanyAnimalsGeneral Agricultural and Biological SciencesThe Biological bulletin
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Magnetic resonance imaging of the siliceous skeleton of the demosponge Lubomirskia baicalensis

2005

The skeletal elements (spicules) of the demosponge Lubomirskia baicalensis were analyzed; they are composed of amorphous, non-crystalline silica, and contain in a central axial canal the axial filament which consists of the enzyme silicatein. The axial filament, that orients the spicule in its longitudinal axis exists also in the center of the spines which decorate the spicule. During growth of the sponge, new serially arranged modules which are formed from longitudinally arranged spicule bundles are added at the tip of the branches. X-ray analysis revealed that these serial modules are separated from each other by septate zones (annuli). We describe that the longitudinal bundles of spicule…

SpiculebiologyAnatomyLubomirskia baicalensisbiology.organism_classificationSilicon DioxideSkeleton (computer programming)Magnetic Resonance ImagingModels BiologicalPoriferaRadiographySpongeDemospongeSponge spiculeNuclear magnetic resonanceApex (mollusc)Structural BiologyMicroscopy Electron ScanningAnimalsLongitudinal axisBody PatterningJournal of Structural Biology
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Biosilica formation in spicules of the sponge Suberites domuncula: synchronous expression of a gene cluster.

2005

The formation of spicules is a complicated morphogenetic process in sponges (phylum Porifera). The primmorph system was used to demonstrate that in the demosponge Suberites domuncula the synthesis of the siliceous spicules starts intracellularly and is dependent on the concentration of silicic acid. To understand spicule formation, a cluster of genes was isolated. In the center of this cluster is the silicatein gene, which codes for the enzyme that synthesizes spicules. This gene is flanked by an ankyrin repeat gene at one side and by a tumor necrosis factor receptor-associated factor and a protein kinase gene at the other side. All genes are strongly expressed in primmorphs and intact anim…

SpiculebiologyBase SequenceMolecular Sequence DataSilicic Acidbiology.organism_classificationCathepsinsCell biologyMicrobiologyEnzymesSuberites domunculaSpongeDemospongeSponge spiculeGene Expression RegulationGene expressionGene clusterGeneticsAnimalsSuberitesGeneGenomics
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Approaches for a Sustainable Use of the Bioactive Potential in Sponges: Analysis of Gene Clusters, Differential Display of mRNA and DNA Chips

2003

In recent years, analyses of the genome organization of marine sponges have begun that have led to the elucidation of selected genes and gene arrangements that exist in gene clusters (e.g. the receptor tyrosine kinase cluster and the allograft inflammatory factor cluster). Most of these studies were performed with the demosponge Suberites domuncula; but Geodia cydonium (Demospongiae), Aphrocallistes vastus (Hexactinellida) and Sycon raphanus (Calcarea) were also investigated. Both S. domuncula and G. cydonium possess a surprisingly large genome of approximately 1.7 pg DNA per haploid set. Taking the high gene density in these sponges into account and considering that predominantly single-co…

Suberites domunculaGene expression profilingSpongeDemospongebiologyGene densityGene duplicationComputational biologybiology.organism_classificationGenomeMolecular biologyGene
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THE DEMOSPONGE GENUS LEPTOMITUS and A NEW SPECIES FROM THE MIDDLE CAMBRIAN OF SPAIN

2007

Forty-five specimens of Leptomitus conicus sp. nov. have been collected from the base of the Murero Formation (Caesaraugustan, Middle Cambrian) in the Murero area of Zaragoza, north-east Spain. The new species is a small obconical sponge, which has coarse oxeas forming parallel rods that run the whole length of the specimens in the man- ner typical of the genus. The biostratigraphy and facies of the levels with Leptomitus conicus have been analysed. Palaeoeco- logical information derived from associated trilobites, brachio- pods and ichnofossils shows that L. conicus lived in a soft substrate of a sublittoral environment of low to low ⁄ moderate energy. According to established Cambrian pal…

Systematicsfood.ingredientbiologyPhylogenetic treeLeptomitusPaleontologyBiostratigraphyTrace fossilbiology.organism_classificationPaleontologySpongefoodDemospongeFaciesEcology Evolution Behavior and SystematicsPalaeontology
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Metazoan Circadian Rhythm: Toward an Understanding of a Light-Based Zeitgeber in Sponges

2013

In all eukaryotes, the 24-h periodicity in the environment contributed to the evolution of the molecular circadian clock. We studied some elements of a postulated circadian clock circuit in the lowest metazoans, the siliceous sponges. First, we identified in the demosponge Suberites domuncula the enzyme luciferase that generates photons. Then (most likely), the photons generated by luciferase are transmitted via the biosilica glass skeleton of the sponges and are finally harvested by cryptochrome in the same individual; hence, cryptochrome is acting as a photosensor. This information-transduction system, generation of light (luciferase), photon transmission (through the siliceous spicules),…

Time FactorsLightCircadian clockPlant Science03 medical and health sciencesDemospongeCryptochromeZeitgeberAnimalsLuciferasesGlycoproteins030304 developmental biologyRegulation of gene expression0303 health sciencesbiologyChemistry030302 biochemistry & molecular biologyNuclear Proteinsbiology.organism_classificationCircadian RhythmPoriferaCell biologyCryptochromesSuberites domunculaSpongeGene Expression RegulationGlucosyltransferasesAnimal Science and ZoologyExoribonuclease activitySignal TransductionTranscription Factors
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A (1->3)-beta-D-glucan recognition protein from the sponge Suberites domuncula. Mediated activation of fibrinogen-like protein and epidermal growth f…

2004

Sponges (phylum Porifera) live in a symbiotic relationship with microorganisms, primarily bacteria. Until now, molecular proof for the capacity of sponges to recognize fungi in the surrounding aqueous milieu has not been available. Here we demonstrate, for the demosponge Suberites domuncula (Porifera, Demospongiae, Hadromerida), a cell surface receptor that recognizes (1--3)-beta-D-glucans, e.g. curdlan or laminarin. This receptor, the (1--3)-beta-D-glucan-binding protein, was identified and its cDNA analysed. The gene coding for the 45 kDa protein was found to be upregulated in tissue after incubation with carbohydrate. Simultaneously with the increased expression of this gene, two further…

beta-GlucansMolecular Sequence DataPinacodermGene Expression-BiochemistryDemospongeEpidermal growth factorComplementary DNALectinsAnimalsAmino Acid SequencePhosphorylationProtein PrecursorsGlucansHadromeridaPhylogenybiologyEpidermal Growth FactorFibrinogenbiology.organism_classificationRecombinant ProteinsPoriferaSuberites domunculaSpongeBiochemistryCarrier ProteinsTyrosine kinaseSequence Alignment
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Co-expression and Functional Interaction of Silicatein with Galectin

2006

Sponges (phylum Porifera) of the class of Demospongiae are stabilized by a siliceous skeleton. It is composed of silica needles (spicules), which provide the morphogenetic scaffold of these metazoans. In the center of the spicules there is an axial filament that consists predominantly of silicatein, an enzyme that catalyzes the synthesis of biosilica. By differential display of transcripts we identified additional proteins involved in silica formation. Two genes were isolated from the marine demosponge Suberites domuncula; one codes for a galectin and the other for a fibrillar collagen. The galectin forms aggregates to which silicatein molecules bind. The extent of the silicatein-mediated s…

biologyNanotechnologyCell BiologyImmunogold labellingMatrix (biology)Flagellumbiology.organism_classificationBiochemistryCell biologySuberites domunculaDemospongeSponge spiculeMolecular BiologyPeptide sequenceGalectinJournal of Biological Chemistry
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