Search results for "Desorption"

showing 10 items of 340 documents

Contact sites of peptide-oligoribonucleotide cross-links identified by a combination of peptide and nucleotide sequencing with MALDI MS.

1997

We have investigated peptide–oligoribonucleotide complexes isolated from cross-linked Escherichia coli 30S ribosomal subunits in order to identify the contact sites of these complexes at the molecular level. For this purpose, reversed-phase (RP) HPLC-purified peptide–oligoribonucleotide complexes were submitted to N-terminal amino acid sequencing in order to determine the cross-linked peptide moiety and were analyzed using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) for calculation of the nucleotide composition of the cross-linked complex. Subsequently, for nucleotide sequence information the complexes were partially hydrolyzed or treated with exonucleases and a…

chemistry.chemical_classificationRibosomal ProteinsBinding SitesBase SequenceChemistryMolecular Sequence DataNucleic acid sequencePeptideRibosomal RNABiochemistryRibosomeAmino acidRNA BacterialBiochemistryBacterial ProteinsRibosomal proteinRNA RibosomalSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationEscherichia coli30SAmino Acid SequencePeptide sequenceJournal of protein chemistry
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Cyclodextrin–calixarene co-polymers as a new class of nanosponges

2014

Hyper-reticulated co-polymers jointly formed by cyclodextrin and calixarene units, which can be considered as a new class of nanosponges, were easily obtained by means of a click chemistry approach. In particular, we succeeded in preparing our materials by exploiting the copper-catalyzed 1,3-dipolar cycloaddition (CuAAC) reaction between heptakis-(6-deoxy)-(6-azido)-beta-cyclodextrin and (5,11,17,23-tetra-tert-butyl)-(25,26,27,28-tetra-propargyloxy)-calix-[4]-arene, mixed in different proportions. These materials were fully characterized by means of combined FT-IR, thermogravimetric, C-13 {H-1} CP-MAS NMR and nitrogen adsorption/desorption techniques. In particular, C-13 {H-1} CP-MAS spectr…

chemistry.chemical_classificationThermogravimetric analysisPolymers and PlasticsCyclodextrinOrganic ChemistryBioengineeringSettore CHIM/06 - Chimica OrganicaPolymerBiochemistryCombinatorial chemistryCycloadditionchemistryDesorptionCalixareneClick chemistryOrganic chemistryCyclodextrins calixarenes CuAAC reaction co-polymersAbsorption (chemistry)Polym. Chem.
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New amphiphilic conjugates of mono- and bis(carboxy)-PEG(2,000) polymers with lipoamino acids as surface modifiers of colloidal drug carriers

2010

chemistry.chemical_classificationamphiphilesPolymers and Plasticspoly(ethylene glycol)Organic Chemistrylipoaminoacids copolymers surface modifiers drug carrierslipoamino acidslong-circulating drug-delivery systemsPolymerCondensed Matter PhysicsColloidMatrix-assisted laser desorption/ionizationchemistrySettore CHIM/09 - Farmaceutico Tecnologico ApplicativoPolymer chemistryAmphiphileamphiphiles; conjugated polymers; lipoamino acids; long-circulating drug-delivery systems; MALDI-TOF MS; poly(ethylene glycol)Materials Chemistryconjugated polymersMALDI-TOF MSPhysical and Theoretical ChemistryDrug carrierConjugate
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Field Desorption Mass Spectra of Gastrine Peptides and Glutathione Derivatives

1979

Oligopeptides comprising the sequence of the C-terminal tetrapeptide of gastrine, Trp-Met-Asp-Phe-NH2, and several derivatives of glutathione, γ-Glu-Cys(SR)-Gly, were characterized by field desorption mass spectrometry. The field desorption mass spectra obtained at various field ion emitter temperatures reveal abundant molecular ions and fragmentation reactions that yield partial sequence information. In the series of glutathione derivatives investigated, characteristic ions formed by cleavage of the γ-Glu-Cys peptide bond determine the substituent at the Cys residue and can therefore be used to identify corresponding conjugation products of drug metabolites with glutathione.

chemistry.chemical_compoundChemistryField desorptionInorganic chemistryMass spectrumOrganic chemistryGeneral ChemistryGlutathioneField desorption mass spectrometryZeitschrift für Naturforschung B
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Chemical transformations of a crystalline coordination polymer: a multi-stage solid–vapour reaction manifold

2013

In its crystal structure the one-dimensional coordination polymer [Ag4(O2C(CF2)2CF3)4(TMP)3]n (1) (TMP = 2,3,5,6-tetramethylpyrazine) adopts a zig-zag arrangement in which pairs of silver(I) centres bridged by two fluorocarboxylate ligands are linked alternately via one or two neutral TMP ligands. This material can reversibly absorb/desorb small alcohols (ROH) in single-crystal-to-single-crystal transformations, despite the lack of porosity in the crystals, to yield a related material of formula [Ag4(O2C(CF2)2CF3)4(TMP)3(ROH)2]n (1-ROH). The absorption process includes coordination of the alcohol to silver(I) centres and, in the process, insertion of the alcohol into one-quarter of the Ag–O…

chemistry.chemical_compoundCrystallographychemistryLigandCoordination polymerHydrogen bondDesorptionInorganic chemistryMoleculeGeneral ChemistryCrystal structureCarboxylateDissociation (chemistry)Chem. Sci.
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Specific dye adsorption at oriented monolayers

2007

We studied the adsorption of water soluble cyanine dyes (pseudoiso-cyanine and “stains-all”) to monomolecular layers of arachidic acid at the water-air interface in a Langmuir trough. Fluorescence microscopy was employed to on-line monitor the formation of J-aggregates upon adsorption. Large two-dimensional monodomain single crystals could be grown by this self-assembly process with optical properties reminiscent of those found and extensively studied for amphiphilic derivatives of the same chromophors [12]. In addition to the necessary Coulombic interaction between subphasedye and target monolayer, we found that details of the crystal morphology also crucially depend on substrate parameter…

chemistry.chemical_compoundMaterials scienceAdsorptionchemistryAbsorption spectroscopyChemical engineeringDesorptionMicroscopyMonolayerArachidic acidCyanineFluorescence spectroscopy
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Type II keratin cDNAs from the rainbow trout: implications for keratin evolution.

2002

From a teleost fish, the rainbow trout Oncorhynchus mykiss, we have cloned and sequenced cDNAs encoding five different type II keratins. The corresponding protein spots, as separated by 2D-PAGE of trout cytoskeletal preparations, have been identified by peptide mass mapping using MALDI mass spectrometry. Three of the sequenced keratins are expressed in the epidermis (subtype IIe), and two in simple epithelia and mesenchymal cells (subtype IIs). The IIs keratins are both orthologs of human K8. This leaves unsequenced only the trace component S3 of the biochemically established trout keratin catalog. A phylogenetic tree has been constructed from a multiple alignment of the rod domains of the …

endocrine systemCancer Researchanimal structuresDNA ComplementaryMolecular Sequence Datamacromolecular substancesPeptide MappingType II keratinEvolution MolecularMesodermSpecies SpecificityAntibody SpecificityKeratinAnimalsHumansProtein IsoformsAmino Acid SequenceCloning MolecularMolecular BiologyZebrafishPhylogenyZebrafishchemistry.chemical_classificationGeneticsMammalsMultiple sequence alignmentintegumentary systembiologyPhylogenetic treeSequence Homology Amino AcidLampreyAntibodies MonoclonalLampreysEpithelial CellsCell Biologybiology.organism_classificationProtein Structure TertiaryTroutchemistryOrgan SpecificityOncorhynchus mykissSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationSharksKeratinsRainbow troutEpidermisSequence AlignmentDevelopmental BiologyDifferentiation; research in biological diversity
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Surface and interface effects on the current-voltage characteristic curves of multiwall carbon nanotube-Si hybrid junctions selectively probed throug…

2021

The possibility to increase the efficiency of photovoltaic (PV) cells based on hybrid carbon nanotube (CNT)–Si heterojunctions is related to the ability to control the chemical properties of the CNT–Si interface and of the CNT bundle layer. In spite of the encouraging performances of PV cells based on multiwall (MW) CNT, so far few efforts have been made in the study of this device compared to single wall (SW) CNT–Si interfaces. Here, surface and interface effects on the current–voltage characteristic curves of MW CNT–Si hybrid junctions are investigated through exposure to HF vapors and to 10 ppm-NO2 and compared to the effects detected in SW CNT–Si junctions. Quite similar results in term…

heterojunctionsMaterials scienceGeneral Physics and Astronomy02 engineering and technologyCarbon nanotubeMultiwalled carbon nanotubesSettore FIS/03 - FISICA DELLA MATERIA01 natural sciencesnanotubeslaw.inventionlawDesorptionEtching0103 physical sciencesMolecule010302 applied physicsSettore FIS/03carbon nanotubesOpen-circuit voltagebusiness.industryPhotovoltaic cellsHeterojunctionSettore ING-INF/02 - Campi Elettromagnetici021001 nanoscience & nanotechnologysolar cellsOptoelectronics0210 nano-technologybusinessShort circuitLayer (electronics)photoemission
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Protein Adsorption Hysteresis and Transient States of Fibrinogen and BMP-2 as Model Mechanisms for Proteome-Binding to Implants

2020

Abstract Protein adsorption studies returned to the focus of medical therapeutics, when it was found that up to 2500 non-plasma proteins adsorbed to hip implants during arthroplastic surgery, challenging peri-implant healing models. Questions have re-emerged as to the implications of uncontrolled protein unfolding after adsorption. In past studies on the cooperativity of protein binding we discovered protein adsorption hysteresis, a thermodynamically irreversible process. The present precursory study comprises real-time kinetic (TIRF-Rheometry) and equilibrium (125I-tracer ) studies on the hysteretic binding of fibrinogen and rhBMP-2 to titanium and glass surfaces via transient states. Ther…

hill constantsChemistrybinding constantsoff-rate (k-1)RMedizinBiomedical Engineeringadsorption and desorption isothermsFibrinogenBone morphogenetic protein 2Hysteresison-rate (k+1)total internal reflection fluorescence (tirf)ProteomeBiophysicsmedicineMedicineTransient (oscillation)tirf-rheometrymedicine.drugProtein adsorptionCurrent Directions in Biomedical Engineering
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Immuno-MALDI-MS in Human Plasma and on-Chip Biomarker Characterizations at the Femtomole Level

2012

Immuno-SPR-MS is the combination of immuno-sensors in biochip format with mass spectrometry. This association of instrumentation allows the detection and the quantification of proteins of interest by SPR and their molecular characterization by additional MS analysis. However, two major bottlenecks must be overcome for a wide diffusion of the SPR-MS analytical platform: (i) To warrant all the potentialities of MS, an enzymatic digestion step must be developed taking into account the spot formats on the biochip and (ii) the biological relevancy of such an analytical solution requires that biosensing must be performed in complex media. In this study, we developed a procedure for the detection …

immuno MALDI-MSMaldi mseducationlcsh:Chemical technologyProteomicsMass spectrometry01 natural sciencesBiochemistryArticleAnalytical Chemistry[SPI.MAT]Engineering Sciences [physics]/MaterialsAutomation03 medical and health sciencesproteomicsLimit of DetectionLab-On-A-Chip DevicesHumanslcsh:TP1-1185Electrical and Electronic Engineering[SPI.NANO]Engineering Sciences [physics]/Micro and nanotechnologies/MicroelectronicsBiochipInstrumentationmass spectrometry030304 developmental biologyDetection limit[SPI.ACOU]Engineering Sciences [physics]/Acoustics [physics.class-ph]0303 health sciencesChromatographyChemistry010401 analytical chemistryReproducibility of ResultsSurface Plasmon ResonanceAtomic and Molecular Physics and Optics0104 chemical sciencesBiomarker (cell)Human plasmaSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationSurface Plasmon Resonance; mass spectrometry; immuno MALDI-MS; biomarker; proteomicsbiomarkerBiosensorBiomarkers
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