Search results for "Development"

showing 10 items of 26949 documents

Parallel diversifications of Cremastosperma and mosannona (annonaceae), tropical rainforest trees tracking neogene upheaval of South America

2018

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phyloge…

0106 biological sciences0301 basic medicineDIVERSITY01 natural sciencesNiche modellingDISPERSALlcsh:ScienceMultidisciplinarybiologyEcologyAmazon rainforest70Biology (Whole Organism)ANDEAN UPLIFTPE&RCBiosystematieknicheGeographyGeodispersalinternationalISTHMUSMolecular datingCLADESPebas systemResearch Article1001Neotropics201004PHYLOGENY RECONSTRUCTIONRainforest010603 evolutionary biologymodelling03 medical and health sciencesHISTORICAL BIOGEOGRAPHYDIVERGENCEVicarianceSPECIATIONLaboratorium voor NematologieEcological nicheAndean orogenyAndean orogenyBiology and Life Sciencesbiology.organism_classificationEVOLUTION030104 developmental biologyMosannonaPanama isthmusBiosystematicslcsh:QEPSLaboratory of NematologyTropical rainforestRoyal Society Open Science
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Responsiveness of metallothionein and hemocyanin genes to cadmium and copper exposure in the garden snail Cornu aspersum.

2020

Abstract Terrestrial gastropods express metal‐selective metallothioneins (MTs) by which they handle metal ions such as Zn2+, Cd2+, and Cu+/Cu2+ through separate metabolic pathways. At the same time, they depend on the availability of sufficient amounts of Cu as an essential constituent of their respiratory protein, hemocyanin (Hc). It was, therefore, suggested that in snails Cu‐dependent MT and Hc pathways might be metabolically connected. In fact, the Cu‐specific snail MT (CuMT) is exclusively expressed in rhogocytes, a particular molluscan cell type present in the hemocoel and connective tissues. Snail rhogocytes are also the sites of Hc synthesis. In the present study, possible interacti…

0106 biological sciences0301 basic medicineDNA ComplementaryPhysiologymedicine.medical_treatmentSnailsGastropodaSnailBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesstressbiology.animalGastropodaparasitic diseasesGeneticsmedicineMetallothioneinAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsMetal metabolismBase Sequencefungimetal metabolismMidgutHemocyaninbiology.organism_classificationResearch PapersRespiratory protein030104 developmental biologybioaccumulationBiochemistryGene Expression RegulationMetalsHemocyaninsAnimal Science and ZoologyMetallothioneinCornu aspersumCopperrespirationCadmiumResearch PaperJournal of experimental zoology. Part A, Ecological and integrative physiology
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Frequent colonization and little in situ speciation in Senecio in the tropical alpine-like islands of eastern Africa.

2016

Premise of the study Floras of continental habitat islands, like those of islands, originate mostly through colonization, which can be followed by in situ speciation. We here address the question of the relative importance of colonization and in situ diversification in the high-altitude areas of the eastern African high mountains, the tropical Afroalpine Region, using the most species-rich genus in the region, Senecio, as an example. Methods We expanded earlier Senecioneae phylogenies by adding more tropical African species and analyzed our phylogenetic tree biogeographically. Key results Senecio contains at least five clades with tropical African species, all of them containing tropical af…

0106 biological sciences0301 basic medicineDNA PlantInsular biogeographyGenetic SpeciationPlant ScienceSenecio010603 evolutionary biology01 natural sciences03 medical and health sciencesGenusGeneticsColonizationSenecioEcology Evolution Behavior and SystematicsPhylogenybiologyEcologySenecioneaeSequence Analysis DNAAfrica Easternbiology.organism_classificationPhylogeography030104 developmental biologyTaxonHabitatGlobal biodiversityAmerican journal of botany
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Inter- and intraspecific hypervariability in interstitial telomeric-like repeats (TTTAGGG)n in Anacyclus (Asteraceae).

2017

BACKGROUND AND AIMS: Interstitial telomeric repeat (ITR) sites, consisting of tandem repeats of telomeric motifs localized at intrachromosomal sites, have been reported in a few unrelated organisms including plants. However, the causes for the occurrence of ITRs outside of the chromosomal termini are not fully understood. One possible explanation are the chromosomal rearrangements involving telomeric sites, which could also affect the location of other structural genome elements, such as the 45S rDNA. Taking advantage of the high dynamism in 45S rDNA loci previously found in Anacyclus (Asteraceae, Anthemideae), the occurrence and patterns of variation of ITRs were explored in this genus wit…

0106 biological sciences0301 basic medicineDNA PlantKaryotypeChromosomal translocationPlant ScienceAsteraceae01 natural sciencesGenomeDNA Ribosomal03 medical and health sciencesTandem repeatAnthemideaeHomologous chromosomemedicineNucleotide MotifsAnacyclusPolymorphism Geneticbiologymedicine.diagnostic_testChromosomeGenetic VariationOriginal ArticlesTelomerebiology.organism_classification030104 developmental biologyGenetics PopulationEvolutionary biologyGenetic LociRNA RibosomalTandem Repeat Sequences010606 plant biology & botanyFluorescence in situ hybridizationAnnals of botany
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Morphological, chemical, and genetic diversity of wild myrtle(Myrtus communis L.) populations in Sicily

2016

Myrtus communis L. İs a shrub widespread in the Mediterranean area. The interest in this species is growing, mainly due to its pharmacological and aromatic properties. The overexploitation of wild populations induced increasing degradation of plant cover with serious risk of loss of genetic diversity. This research explored the morphological, chemical, and genetic diversity of wild myrtle populations in Sicily, with the aim to provide a first characterization of a core collection of 36 accessions from 7 localities for future domestication programs. Amplified fragment length polymorphism fingerprinting generated 152 polymorphic fragments. STRUCTURE analysis identified three genetic clusters …

0106 biological sciences0301 basic medicineDPPHMyrtleBiology01 natural sciencesAnalysis of molecular varianceFixation index03 medical and health scienceschemistry.chemical_compoundleaf antioxidant propertieSettore AGR/07 - Genetica AgrariaBotanyDomesticationGenetic resourcesGenetic diversityABTSMyrtus communisEcologyLeaf antioxidant propertiesMolecular markersForestryAgronomySettore AGR/02 - Agronomia E Coltivazioni Erbacee030104 developmental biologyAmplified fragment length polymorphismgenetic resourcesleaf antioxidant propertiesmyrtlemolecular markersAmplified fragment length polymorphismchemistryAmplified fragment length polymorphismgenetic resourceAgronomi010606 plant biology & botanyFood ScienceTURKISH JOURNAL OF AGRICULTURE AND FORESTRY
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De novo transcriptome assembly and developmental mode specific gene expression of Pygospio elegans

2017

Species with multiple different larval developmental modes are interesting models for the study of mechanisms underlying developmental mode transitions and life history evolution. Pygospio elegans, a small, tube-dwelling polychaete worm commonly found in estuarine and marine habitats around the northern hemisphere, is one species with variable developmental modes. To provide new genomic resources for studying P. elegans and to address the differences in gene expression between individuals producing offspring with different larval developmental modes, we performed whole transcriptome Illumina RNA sequencing of adult worms from two populations and prepared a de novo assembly of the P. elegans…

0106 biological sciences0301 basic medicineDe novo transcriptome assemblySequence assemblyBiology010603 evolutionary biology01 natural sciencesTranscriptome03 medical and health sciencesGene expressionAnimalsgeeniekspressioGenes Developmental14. Life underwaterEcology Evolution Behavior and SystematicsGeneticsLarvaPolychaeteGene Expression ProfilingfungiGene Expression Regulation DevelopmentalRNAMolecular Sequence AnnotationPolychaetaMarine invertebratesbiology.organism_classification030104 developmental biologyLarvagene expressionta1181TranscriptomeMicrosatellite RepeatsDevelopmental BiologyEvolution & Development
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Vertebrate defense against parasites: Interactions between avoidance, resistance, and tolerance

2017

Hosts can utilize different types of defense against the effects of parasitism, including avoidance, resistance, and tolerance. Typically, there is tremendous heterogeneity among hosts in these defense mechanisms that may be rooted in the costs associated with defense and lead to trade‐offs with other life‐history traits. Trade‐offs may also exist between the defense mechanisms, but the relationships between avoidance, resistance, and tolerance have rarely been studied. Here, we assessed these three defense traits under common garden conditions in a natural host–parasite system, the trematode eye‐fluke Diplostomum pseudospathaceum and its second intermediate fish host. We looked at host ind…

0106 biological sciences0301 basic medicineDefence mechanismsParasitismZoologyTrade-off010603 evolutionary biology01 natural sciencesresistance03 medical and health sciencesbiology.animaltrade‐offSalmoEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape Conservationtrade-offtoleranceEcologybiologyResistance (ecology)host–parasite interactionEcologyHost (biology)parasite avoidanceVertebrateAquatic animalbiology.organism_classificationhost-parasite interaction030104 developmental biologyta1181Ecology and Evolution
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Natural Biostimulants Elicit Plant Immune System in an Integrated Management Strategy of the Postharvest Green Mold of Orange Fruits Incited by Penic…

2021

This study was aimed at testing the integrated use of a natural biostimulant based on seaweed (Ascophyllum nodosum) and plant (alfalfa and sugarcane) extracts and reduced dosages of the conventional synthetic fungicide Imazalil (IMZ) to manage postharvest rots of orange fruits. The following aspects were investigated: (i) the effectiveness of postharvest treatment with natural biostimulant alone or in mixture with IMZ at a reduced dose against green mold caused byPenicillium digitatum; (ii) the differential expression of defense genes in orange fruits treated with the natural biostimulant both alone and in combination with a reduced dose of IMZ; (iii) the persistence of the inhibitory activ…

0106 biological sciences0301 basic medicineDoseimazalilPlant ScienceOrange (colour)Plant disease resistanceBiology01 natural sciencesSB1-111003 medical and health sciencesmedia_common.cataloged_instanceEuropean unionmedia_commonPenicillium digitatumresistance genesPlant culturefood and beveragesbiology.organism_classificationFungicidebiostimulantsHorticulture030104 developmental biologyfungicide residuesPostharvestalgal and plant extractsresistance-inducersCitrus × sinensisCitrus sinensis010606 plant biology & botanyFrontiers in Plant Science
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Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

2017

Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute…

0106 biological sciences0301 basic medicineEPIGENOMIC DIVERSITY[SDV]Life Sciences [q-bio]Species distributionINDIVIDUAL VARIATIONPhenotypic plasticity01 natural sciencesGenomephenotypic plasticityEpigenesis GeneticDNA METHYLATION VARIATIONComputingMilieux_MISCELLANEOUS0303 health sciencesEcologyEcologybioinformatiikkagenomiikkaGenomicsPlantsBioinformatics; ecological epigenetics; genomics; phenotypic plasticity; response to environment; Ecology Evolution Behavior and Systematics[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]HabitatepigenetiikkainternationalPHYSCOMITRELLA-PATENSresponse to environmentPERENNIAL HERBkasviekologiaEcological epigeneticsSEQUENCING DATAEvolutionBioinformaticsEcology (disciplines)GenomicsBiology010603 evolutionary biology[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesPolyploidBehavior and SystematicskasvitEpigeneticsEcosystemEcology Evolution Behavior and Systematics030304 developmental biologyHERB HELLEBORUS-FOETIDUSPhenotypic plasticityBioinformatics ; Ecological Epigenetics ; Genomics ; Phenotypic Plasticity ; Response To EnvironmentAmbientaleResponse to environmentDNA Methylation15. Life on landEcological realismPlant ecology030104 developmental biologyARABIDOPSIS-THALIANABioinformatics ecological epigenetics genomics phenotypic plasticity response to environmentAdaptation[SDE.BE]Environmental Sciences/Biodiversity and EcologyNATURAL-POPULATIONS
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The late Pleistocene origin of the Italian and Maltese populations of Potamon fluviatile (Malacostraca: Decapoda): insights from an expanded sampling…

2017

Evidence available for most inland water and terrestrial organisms highlights the significant role played by southern Italy, Sicily and the Maltese islands as refuges during Pleistocene climatic fluctuations. However, to date, the hypothesis that these areas may have acted as Pleistocene refugia for the freshwater crab Potamon fluviatile has not been explicitly tested, and a recent origin of local P. fluviatile populations was proposed on the basis of a small set of analysed molecular data. We have thus expanded the currently available data set on the population genetic structure of P. fluviatile through dedicated samplings in Sicily (Italy, 18 specimens), the Maltese Islands (Malta, 15 spe…

0106 biological sciences0301 basic medicineEarly PleistocenePleistoceneFreshwater crabs -- Maltarefuge areaPopulationSettore BIO/05 - Zoologiarefuge areasFreshwater crabs -- Italy010603 evolutionary biology01 natural sciences03 medical and health sciencesCytochrome oxidase -- CongressesMalacostracalcsh:Zoologylcsh:QL1-991educationFreshwater crabrange expansioneducation.field_of_studyPotamon fluviatilegeography.geographical_feature_categorybiologyEcologybiology.organism_classificationMitochondrial DNAlanguage.human_languageMaltese030104 developmental biologyGeographyArchipelagolanguageCytochromesAnimal Science and ZoologymtDNA Cytochrome c oxidase subunit I (COI)Freshwater crabThe European Zoological Journal
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