Search results for "Diffraction tomography"

showing 10 items of 32 documents

Using FOCUS to solve zeolite structures from three-dimensional electron diffraction data

2013

The programFOCUS[Grosse-Kunstleve, McCusker & Baerlocher (1997).J. Appl. Cryst.30, 985–995] was originally developed to solve zeolite structures from X-ray powder diffraction data. It uses zeolite-specific chemical information (three-dimensional 4-connected framework structure with known bond distances and angles) to supplement the diffraction data. In this way, it is possible to compensate, at least in part, for the ambiguity of the reflection intensities resulting from reflection overlap, and the program has proven to be quite successful. Recently, advances in electron microscopy have led to the development of automated diffraction tomography (ADT) and rotation electron diffraction (R…

Diffractionzeolites02 engineering and technology010402 general chemistry01 natural sciencesGeneral Biochemistry Genetics and Molecular Biologylaw.inventionautomated diffraction tomography; computer programs; rotation electron diffraction; structure solution; zeolitesDiffraction tomographyOpticslawstructure solutionautomated diffraction tomographyrotation electron diffractionbusiness.industryChemistryScattering021001 nanoscience & nanotechnologycomputer programs0104 chemical sciencesElectron diffractionDirect methodsCrystalliteElectron microscope0210 nano-technologybusinessPowder diffractionJOURNAL OF APPLIED CRYSTALLOGRAPHY
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Expanding the Variety of Zirconium‐based Inorganic Building Units for Metal–Organic Frameworks

2019

Two new zirconium-based metal-organic frameworks with the composition [Zr6 O4 (OH)4 (OAc)6 (BDC)3 ] (CAU-26) and [Zr5 O4 (OH)4 (OAc)4 (BDC)2 ] (CAU-27) are reported, which were synthesized from acetic acid, a rarely utilized but green and sustainable solvent (BDC2- : 1,4-benzenedicarboxylate). Structure determination aided by automated electron diffraction tomography revealed that CAU-26 is composed of layers of well-known {Zr6 O8 } clusters interconnected by terephthalate ions. In contrast CAU-27 exhibits a three-dimensional structure with a so far unknown type of one-dimensional inorganic building unit (IBU), which can be rationalized as condensed polyhedron-sharing chains of {Zr6 O8 } cl…

Green chemistryMaterials scienceChemistry MultidisciplinaryCATALYZED BORYLATIONchemistry.chemical_element010402 general chemistryHIGHLY EFFICIENTBorylation01 natural sciencesTOXICITYCatalysisCatalysisAUTOMATED DIFFRACTION TOMOGRAPHYPolymer chemistryMoleculeZR-MOFGreen ChemistryZirconiumScience & TechnologySTABILITY010405 organic chemistryDirect C-H borylationGeneral ChemistryGeneral MedicineElectron DiffractionORGANOSILICA0104 chemical sciencesSolventChemistrychemistryPhysical SciencesARENESMetal-organic frameworkChemical stabilityZirconiumCLUSTERSMetal-organic FrameworksGREEN SYNTHESISAngewandte Chemie
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Ba 6 P 12 N 17 O 9 Br 3 – A Column‐Type Phosphate Structure Solved from Single‐Nanocrystal Data Obtained by Automated Electron Diffraction Tomography

2011

Oxonitridophosphate Ba6P12N17O9Br3 was synthesized by heating a multicomponent mixture of BaBr2, BaS, phosphoryl triamide and thiophosphoryl triamide in an evacuated and sealed silica-glass ampoule to 750 °C. Ba6P12N17O9Br3 was obtained as the main product as a nanocrystalline powder. The crystal structure was determined ab initio on the basis of electron diffraction data acquired from a single needle-shaped nanocrystal by automated diffraction tomography. Ba6P12N17O9Br3 crystallizes in the hexagonal space group P63/m (no. 176) with unit cell parameters a = 14.654(19), c = 8.255(9) A and Z = 2. Its structure includes triangular, column-shaped anions of ∞1{(P12N17O9)9–}, which are built from…

Inorganic ChemistryDiffraction tomographyCrystallographyElectron diffractionNanocrystalChemistryAb initioCrystal structureNanocrystalline materialAmpouleIonEuropean Journal of Inorganic Chemistry
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A multi-technique characterisation of cronstedtite synthetized by iron-clay interaction in a step by step cooling procedure

2013

International audience; The cooling of steel containers in radioactive-waste storage was simulated in a step-by-step experiment from 90 to 40 degrees C. Among newly formed clay minerals observed in run products, cronstedtite was identified by a number of analytical techniques (powder X-ray diffraction, transmission electron microscopy, and scanning electron microscopy). Cronstedtite has not previously been recognized to be so abundant and so well crystallized in an iron-clay interaction experiment. The supersaturation of experimental solutions with respect to cronstedtite was due to the availability of Fe and Si in solution, as a result of the dissolution of iron metal powder, quartz, and m…

Materials scienceBase (chemistry)Analytical chemistry[SDU.STU]Sciences of the Universe [physics]/Earth SciencesSoil Science020101 civil engineering02 engineering and technology010502 geochemistry & geophysics01 natural sciencesCronstedtite; Experimental iron-clay interaction; MDO polytypes; Radioactive waste storage0201 civil engineeringDiffraction tomographyGeochemistry and Petrology[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistryradioactive waste storageEarth and Planetary Sciences (miscellaneous)experimental iron-clay interactionDissolutionQuartz[SDU.STU.AG]Sciences of the Universe [physics]/Earth Sciences/Applied geologyMDO polytypes0105 earth and related environmental sciencesWater Science and Technologychemistry.chemical_classificationSupersaturationAtmospheric temperature rangeCronstedtiteCrystallographychemistrySelected area diffractionClay minerals[SDU.STU.MI]Sciences of the Universe [physics]/Earth Sciences/Mineralogy
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Partially Coherent Optical Diffraction Tomography Toward Practical Cell Study

2021

Optical diffraction tomography (ODT) is a computational imaging technique based on refractive index (RI) contrast. Its application for microscopic imaging of weakly absorbing and scattering samples has been demonstrated by using a specially designed holographic microscope with angular scanning of the coherent sample illumination direction. Recently, an alternative low cost technique based on partially coherent sample illumination (PC-ODT), which is compatible with the conventional wide-field transmission microscope, has been established. In this case, the 3D refractive index distribution of the sample is obtained by deconvolution from a single stack of through-focus intensity images. The pe…

Materials scienceMicroscopeoptical diffraction tomographyQC1-999Materials Science (miscellaneous)HolographyBiophysicsGeneral Physics and Astronomy02 engineering and technology01 natural scienceslaw.invention010309 opticsOpticsStack (abstract data type)lawcell imaging0103 physical sciencesOpticaPhysical and Theoretical ChemistryMathematical PhysicsÓpticarefractive indexScatteringbusiness.industrywide-field transmission microscopyPhysics021001 nanoscience & nanotechnologyquantitative imagingTemporal resolutionTomographyDeconvolution0210 nano-technologybusinessRefractive indexFrontiers in Physics
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Structural Characterization of Organics Using Manual and Automated Electron Diffraction

2010

In the last decade the importance of transmission electron microscopic studies has become increasingly important with respect to the characterization of organic materials, ranging from small organic molecules to polymers and biological macromolecules. This review will focus on the use of transmission electron microscope to perform electron crystallography experiments, detailing the approaches in acquiring electron crystallographic data. The traditional selected area approach and the recently developed method of automated diffraction tomography (ADT) will be discussed with special attention paid to the handling of electron beam sensitive organic materials.

Materials sciencePolymers and PlasticsRenewable Energy Sustainability and the EnvironmentElectron crystallographyBiomedical EngineeringCrystallographic dataNanotechnologyGeneral ChemistryElectronautomated data acquisition; electron diffraction; simulation methods; structure determinationsimulation methodsautomated data acquisitionstructure determinationElectronic Optical and Magnetic MaterialsCharacterization (materials science)Diffraction tomographyElectron diffractionTransmission electron microscopyMaterials ChemistryEnergy filtered transmission electron microscopyelectron diffractionElectrical and Electronic Engineering
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Structure characterization of hard materials by precession electron diffraction and automatic diffraction tomography: 6H-SiC semiconductor and Ni1+xT…

2012

Using a combination of automated diffraction tomography and precession electron diffraction techniques, quasi-kinematical electron diffraction data sets were collected from intermetallic Ni1+xTe1 embedded nanodomains and ion-thinned specimens of 6H–SiC semiconductor. Cell parameters and space groups were found automatically from the reconstructed 3D diffraction volume. The extracted intensities were used for fast ab initio structure determination by direct methods.

Materials scienceReflection high-energy electron diffractionGas electron diffractionbusiness.industryPhysics::OpticsCondensed Matter PhysicsMolecular physicsElectronic Optical and Magnetic MaterialsDiffraction tomographyCondensed Matter::Materials ScienceOpticsElectron diffractionMaterials ChemistryPrecession electron diffractionElectrical and Electronic EngineeringSelected area diffractionbusinessPowder diffractionElectron backscatter diffraction
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Ab initio structure determination and quantitative disorder analysis on nanoparticles by electron diffraction tomography.

2017

Nanoscaled porous materials such as zeolites have attracted substantial attention in industry due to their catalytic activity, and their performance in sorption and separation processes. In order to understand the properties of such materials, current research focuses increasingly on the determination of structural features beyond the averaged crystal structure. Small particle sizes, various types of disorder and intergrown structures render the description of structures at atomic level by standard crystallographic methods difficult. This paper reports the characterization of a strongly disordered zeolite structure, using a combination of electron exit-wave reconstruction, automated diffrac…

Materials scienceStackingAb initio02 engineering and technologyCrystal structure010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciencesBiochemistry0104 chemical sciencesCharacterization (materials science)Inorganic ChemistryCrystalDiffraction tomographyReciprocal latticeElectron diffractionStructural BiologyChemical physicsGeneral Materials SciencePhysical and Theoretical Chemistry0210 nano-technologyActa crystallographica. Section A, Foundations and advances
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Highly stable and porous porphyrin-based zirconium and hafnium phosphonates – electron crystallography as an important tool for structure elucidation

2018

The Ni-metallated porphyrin-based tetraphosphonic acid (Ni-tetra(4-phosphonophenyl)porphyrin, Ni-H8TPPP) was used for the synthesis of highly porous metal phosphonates containing the tetravalent cations Zr4+ and Hf4+. The compounds were thoroughly characterized regarding their sorption properties towards N2 and H2O as well as thermal and chemical stability. During the synthesis optimization the reaction time could be substantially decreased under stirring from 24 to 3 h in glass vials. M-CAU-30, [M2(Ni-H2TPPP)(OH/F)2]·H2O (M = Zr, Hf) shows exceptionally high specific surface areas for metal phosphonates of aBET = 1070 and 1030 m2 g-1 for Zr- and Hf-CAU-30, respectively, which are very clos…

PORESMaterials scienceChemistry Multidisciplinarychemistry.chemical_element02 engineering and technologyCrystal structure010402 general chemistry01 natural sciencesAQUEOUS-SOLUTIONMETAL-ORGANIC FRAMEWORKSchemistry.chemical_compoundDESIGNAUTOMATED DIFFRACTION TOMOGRAPHYFormula unitMoleculeCRYSTAL-STRUCTUREZirconiumScience & TechnologySTABILITYGeneral Chemistry021001 nanoscience & nanotechnologyPorphyrin0104 chemical sciencesChemistryMANGANESE PORPHYRINSCrystallographychemistryElectron diffractionPhysical SciencesLIGANDSChemical stabilityCyclic voltammetry0210 nano-technologySYSTEMChemical Science
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A new hydrous Al-bearing pyroxene as a water carrier in subduction zones

2011

Abstract A new Hydrous Al-bearing PYroxene (HAPY) phase has been synthesized at 5.4 GPa, 720 °C in the MgO–Al2O3–SiO2–H2O model system. It has the composition Mg2.1Al0.9(OH)2Al0.9Si1.1O6, a C-centered monoclinic cell with a = 9.8827(2), b = 11.6254(2) c = 5.0828(1) A and β = 111.07(1)°. The calculated density is 3.175 g/cm3 and the water content is 6.9% H2O by weight. Its structure has been solved in space group C2/c by the recently developed automated electron diffraction tomography method and refined by synchrotron X-ray powder diffraction. HAPY is a single chain inosilicate very similar to pyroxenes but with three instead of two cations in the octahedral layer, bonded to four oxygens and…

PyroxenePrecession electron diffractionSubductionSilicatechemistry.chemical_compoundCrystallographyHydrous pyroxeneGeophysicschemistryElectron diffractionOctahedronSpace and Planetary ScienceGeochemistry and PetrologyEarth and Planetary Sciences (miscellaneous)Precession electron diffractionElectron diffraction tomography; Hydrous pyroxene; Precession electron diffraction; SubductionElectron diffraction tomographyChloriteGeologyPowder diffractionMonoclinic crystal systemEarth and Planetary Science Letters
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