Search results for "Dioxygen"

showing 10 items of 80 documents

Estimation of the density of the protocatechuate-degrading bacterial community in soil by real-time PCR

2008

Summary The β-ketoadipate pathway is the major route for degradation of aromatic compounds by various soil microorganisms. Protocatechuate 3,4-dioxygenase, a key enzyme of this pathway and which is encoded by pcaGH genes, catalyses the ring cleavage of protocatechuate. Microorganisms harbouring pcaGH genes are widely distributed in the environment but little is known about their relative abundance within the total microflora. Hence, this paper reports the development of a real-time PCR assay to quantify the bacterial pcaH sequence that encodes the β sub-unit of the protocatechuate 3,4-dioxygenase. This real-time PCR assay was linear over seven orders of magnitude with a calculated efficienc…

chemistry.chemical_classificationENVIRONMENTEXTRACTIONMicroorganism34-DIOXYGENASESoil dnaDIVERSITYSoil ScienceBETA-KETOADIPATE PATHWAY AGROBACTERIUM-TUMEFACIENS GENESAmpliconBiologyDEGRADATIONQUANTIFICATION[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyCleavage (embryo)Molecular biologyAmino acidReal-time polymerase chain reactionEnzymechemistryPCAHGene
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Tryptophan catabolism via kynurenine production in Streptomyces coelicolor: identification of three genes coding for the enzymes of tryptophan to ant…

2011

Most enzymes involved in tryptophan catabolism via kynurenine formation are highly conserved in Prokaryotes and Eukaryotes. In humans, alterations of this pathway have been related to different pathologies mainly involving the central nervous system. In Bacteria, tryptophan and some of its derivates are important antibiotic precursors. Tryptophan degradation via kynurenine formation involves two different pathways: the eukaryotic kynurenine pathway, also recently found in some bacteria, and the tryptophan-to-anthranilate pathway, which is widespread in microorganisms. The latter produces anthranilate using three enzymes also involved in the kynurenine pathway: tryptophan 2,3-dioxygenase (TD…

chemistry.chemical_classificationKynurenine pathwayCatabolismHydrolasesStreptomyces coelicolorTryptophanTryptophanTryptophan Kynurenine S. coelicolor CDAStreptomyces coelicolorGeneral MedicineBiologybiology.organism_classificationApplied Microbiology and BiotechnologyTryptophan Oxygenasechemistry.chemical_compoundKynureninaseEnzymechemistryBiochemistryArylformamidaseIndoleamine 23-dioxygenaseKynurenineKynurenineMetabolic Networks and PathwaysBiotechnology
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Electrocatalytic properties of manganese and cobalt polyporphine films toward oxygen reduction reaction

2018

International audience; Novel member of polymetalloporphines, namely manganese polymetalloporphine of type I (pMnP-I) obtained by ion exchange from magnesium polyporphine of type I (pMgP-I) is reported for the first time and compared to its cobalt analogue (pCoP-I). Both polymer films have been obtained via two-step procedure: demetaladon of the pMgP-I electrode film via its exposure to trifluoroacetic acid solution, resulting in formation of the metal-free polyporphine of type I (pH(2)P-I) followed by electrochemically induced incorporation of Co or Mn ions from the acetonitrile solution of cobalt and manganese perchlorates. A further oxidative transformation of pCoP-I, polymer films has l…

conjugated porphyrin polymerGeneral Chemical EngineeringInorganic chemistryFOS: Physical scienceschemistry.chemical_element02 engineering and technologyElectrolyteManganesepositive potentialsphthalocyanines010402 general chemistry01 natural sciencescatalystsAnalytical ChemistryCatalysisporphine[CHIM.ANAL]Chemical Sciences/Analytical chemistryframeworksElectrochemistry[CHIM]Chemical Sciencesdioxygen reductionCondensed Matter - Materials SciencemetalloporphyrinsAqueous solutionIon exchangeMagnesiumElectroactive polymersMaterials Science (cond-mat.mtrl-sci)Oxygen electroreductionelectropolymerizationfuel-cell cathode021001 nanoscience & nanotechnologyMetalloporphines0104 chemical sciencesPolymer film coated electrodechemistry0210 nano-technologyPlatinumCobaltMg(II) porphineJournal of Electroanalytical Chemistry
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Modeling the Effect of Modified Atmospheres on Conidial Germination of Fungi from Dairy Foods

2017

Modified atmosphere packaging (MAP) is commonly applied to extend food shelf-life. Despite growth of a wide variety of fungal contaminants has been previously studied in relation to modified-atmospheres, few studies aimed at quantifying the effects of dioxygen (O2) and carbon dioxide (CO2) partial pressures on conidial germination in solid agar medium. In the present study, an original culture method was developed, allowing microscopic monitoring of conidial germination under modified-atmospheres in static conditions. An asymmetric model was utilized to describe germination kinetics of Paecilomyces niveus, Mucor lanceolatus, Penicillium brevicompactum, Penicillium expansum, and Penicillium …

dioxygen reductionMicrobiology (medical)carbon dioxide increaselcsh:QR1-502predictive mycologydairy foodsMicrobiologylcsh:Microbiologymodified atmosphereOriginal ResearchFrontiers in Microbiology
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Role of dioxygenase α-DOX2 and SA in basal response and in hexanoic acid-induced resistance of tomato (Solanum lycopersicum) plants against Botrytis …

2015

Resistance of tomato (Solanum Lycopersicum) to the fungal pathogen Botrytis cinerea requires complex interplay between hormonal signalling. In this study, we explored the involvement of new oxylipins in the tomato basal and induced response to this necrotroph through the functional analysis of the tomato α-dioxygenase2 (α-DOX2)-deficient mutant divaricata. We also investigated the role of SA in the defence response against this necrotrophic fungus using SA-deficient tomato nahG plants. The plants lacking dioxigenase α-DOX2, which catalyses oxylipins production from fatty acids, were more susceptible to Botrytis, and hexanoic acid-induced resistance (Hx-IR) was impaired; hence α-DOX2 is requ…

food.ingredientDioxygenasePhysiologyDefence mechanismsPlant ScienceCyclopentanesMicrobiologyDioxygenasesBotrytis cinereachemistry.chemical_compoundfoodSolanum lycopersicumPlant Growth RegulatorsGene Expression Regulation PlantOxylipinsCaproatesGlucansBotrytis cinereaBotrytisDisease ResistancePlant DiseasesPlant ProteinsHexanoic acidbiologyJasmonic acidfungiCallosefood and beveragesSalicylic acidbiology.organism_classificationchemistryBiochemistryFatty Acids UnsaturatedBotrytisSolanumHexanoic acidReactive Oxygen SpeciesSalicylic AcidAgronomy and Crop ScienceSalicylic acidJournal of plant physiology
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Self-Assembled Molecular Rafts at Liquid|Liquid Interfaces for Four-Electron Oxygen Reduction

2011

The self-assembly of the oppositely charged water-soluble porphyrins, cobalt tetramethylpyridinium porphyrin (CoTMPyP(4+)) and cobalt tetrasulphonatophenyl porphyrin (CoTPPS(4-)), at the interface with an organic solvent to form molecular "rafts", provides an excellent catalyst to perform the interfacial four-electron reduction of oxygen by lipophilic electron donors such as tetrathiafulvalene (TTF). The catalytic activity and selectivity of the self-assembled catalyst toward the four-electron pathway was found to be as good as that of the Pacman type cofacial cobalt porphyrins. The assembly has been characterized by UV-visible spectroscopy, Surface Second Harmonic Generation, and Scanning …

inorganic chemicals2Nd-Harmonic Generationchemistry.chemical_elementPhotochemistryBiochemistryOxygenCatalysisCatalysischemistry.chemical_compoundWater-Soluble PorphyrinsColloid and Surface ChemistryCobalt Porphyrinsheterocyclic compoundsLiquid/Liquid Interface2Nd DerivativesEnergyDioxygenPolarizable Continuum ModelGeneral ChemistryPorphyrinRadical CationchemistryRadical ionSurface second harmonic generationDensity functional theoryImmiscible Electrolyte-SolutionsCobaltTetrathiafulvalene
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Iron(iii) oxamato-catalyzed epoxidation of alkenes by dioxygen and pivalaldehyde

1997

A new iron(III)–carbonato monomeric complex of orthophenylenebis( oxamato) (opba) 1 is synthesized, and spectroscopically and structurally characterized; it is a moderately efficient non-heme catalyst for the aerobic epoxidation of alkenes with co-oxidation of pivalaldehyde. Ruiz Garcia, Rafael, Rafael.Ruiz@uv.es ; Fernandez Picot, Isabel, Isabel.Fernandez@uv.es ; Pedro Llinares, Jose Ramon, Jose.R.Pedro@uv.es

inorganic chemicalsDioxygenUNESCO::QUÍMICA::Química inorgánicaUNESCO::QUÍMICAorganic chemicalsIronMetals and AlloysIron ; Dioxygen ; Orthophenylenebis ; Catalyst ; PivalaldehydeGeneral Chemistry:QUÍMICA::Química inorgánica [UNESCO]:QUÍMICA [UNESCO]CatalysisSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsCatalysischemistry.chemical_compoundMonomerchemistryPolymer chemistryMaterials ChemistryCeramics and Compositesheterocyclic compoundsCatalystOrthophenylenebisPivalaldehyde
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P574Activation of the regulatory T-cell-indoleamine 2,3 dioxygenase Axis promotes vascular tolerance mechanisms and reduces atherosclerosis

2018

medicine.anatomical_structurePhysiologyRegulatory T cellChemistryPhysiology (medical)medicineCardiology and Cardiovascular MedicineIndoleamine 23-dioxygenaseCell biologyCardiovascular Research
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Increased mRNAs for procollagens and key regulating enzymes in rat skeletal muscle following downhill running.

1999

The purpose of the study was to investigate pre-translational regulation of collagen expression after a single bout of exercise. We analysed steady-state messenger ribonucleic acid (mRNA) levels for collagen types I, III and IV, alpha- and beta-subunits of prolyl 4-hydroxylase and lysyl oxidase (enzymes modifying procollagen chains), and enzyme activity of prolyl 4-hydroxylase from rat soleus muscle (MS) and the red parts of quadriceps femoris muscle (MQF) after 12 h and after 1, 2, 4, 7 and 14 days of downhill (-13.5 degrees ) treadmill running at a speed of 17 m.min-1 for 130 min. Histological and biochemical assays revealed exercise-induced muscle damage in MQF but not MS. Steady-state m…

medicine.medical_specialtyPhysiologyClinical BiochemistryPhysical ExertionProcollagen-Proline DioxygenaseLysyl oxidaseBiologyRunningProtein-Lysine 6-OxidaseHydroxyprolinechemistry.chemical_compoundType IV collagenPhysiology (medical)Internal medicineGene expressionmedicineAnimalsExertionRNA MessengerRats WistarMuscle SkeletalGlucuronidaseSoleus muscleSkeletal muscleBlotting NorthernRatsProcollagen peptidaseEndocrinologymedicine.anatomical_structurechemistryFemaleCollagenProcollagenPflugers Archiv : European journal of physiology
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Enhanced prolylhydroxylase activity in the posterior annulus fibrosus of canine intervertebral discs following long-term running exercise

2010

The effect of long-term excercise on the intervertebral disc collagen concentration (hydroxyproline), collagen-synthesizing enzymes (prolyl-4-hydroxylase, PH, and galactosyl-hydroxylysyl glucosyltransferase, GGT) and hydroxypyridinium crosslinks was studied in ten female beagle dogs. The dogs were run on a treadmill for 1 year starting at the age of 15 weeks. The daily running distance was gradually increased to 40km, which distance the dogs ran for the final 15 weeks. Ten untrained dogs from the same breeding colony served as controls. The nucleus pulposus and anterior and posterior halves of the annulus fibrosus of C2-3, T10-12, L4-5 disc segments were analysed. Crosslinks were measured f…

musculoskeletal diseasesTime FactorsProcollagen-Proline DioxygenaseBeagleThoracic VertebraeHydroxyprolinechemistry.chemical_compoundDogsLumbarStress PhysiologicalPhysical Conditioning AnimalmedicineAnimalsOrthopedics and Sports MedicineTreadmillIntervertebral DiscAnnulus (mycology)Lumbar VertebraePhysical conditioningbusiness.industryIntervertebral discAnatomymusculoskeletal systemBiomechanical PhenomenaHydroxyprolinemedicine.anatomical_structurechemistryGlucosyltransferasesModels AnimalCollagen metabolismCervical VertebraePhysical EnduranceFemaleSurgeryCollagenbusinessEuropean Spine Journal
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