Search results for "ECOSYSTEM"

showing 10 items of 1752 documents

Shifts in diversity and microscale distribution of the adapted bacterial phenotypes due to Hg(II) spiking in soil.

2003

In a previous experiment [Ranjard et al. (2000) FEMS Microbiol Ecol 31:107–115], the spatial heterogeneity of a mercury impact on soil bacterial community was revealed by an increase of mercury-resistant (HgR) bacterial numbers in the outer fraction and the sand fractions when compared to those in the silt fractions. The objectives of the present study were (i) to investigate whether mercury exposure affects the diversity and the distribution within the various fractions of the HgR populations and (ii) to evaluate the contribution of the HgR populations to the overall community adaptation. A total of 236 strains isolated before (104 isolates) and 30 days (132 isolates) after spiking were ch…

DNA BacterialRibosomal Intergenic Spacer analysisMolecular Sequence DataAdaptation BiologicalSoil ScienceStreptomycesPolymerase Chain Reaction03 medical and health sciencesXanthomonasPseudomonasRNA Ribosomal 16SGenotypeEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSEcosystemSoil Microbiology2. Zero hungerGenetics[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesEcologyPhylogenetic treebiologyBase Sequence030306 microbiology04 agricultural and veterinary sciencesMercuryBIOLOGIE MOLECULAIREbiology.organism_classification16S ribosomal RNAAmplified Ribosomal DNA Restriction AnalysisSpatial heterogeneity[SDV.EE] Life Sciences [q-bio]/Ecology environment040103 agronomy & agriculture0401 agriculture forestry and fisheriesDNA IntergenicMicrobial ecology
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Cumulative Effects of Short-Term Polymetal Contamination on Soil Bacterial Community Structure

2006

ABSTRACT In this study we evaluated the short-term effects of copper, cadmium, and mercury, added singly or in combination at different doses, on soil bacterial community structure using the bacterial automated ribosomal intergenic spacer analysis (B-ARISA) fingerprinting technique. Principal-component analysis of B-ARISA profiles allowed us to deduce the following order of impact: (Cu + Cd + Hg) >> Hg ≥ Cd > Cu. These results demonstrated that there was a cumulative effect of metal toxicity. Furthermore, the trend of modifications was consistent with the “hump-backed” relationships between biological diversity and disturbance described by Giller et al. (K. E. Giller, E. Witler, an…

DNA BacterialRibosomal Intergenic Spacer analysischemistry.chemical_elementMetal toxicityBiologyApplied Microbiology and BiotechnologyMicrobiologyMicrobial EcologyMetals HeavyDNA Ribosomal SpacerSoil PollutantsEcosystemSoil Microbiology[SDV.EE]Life Sciences [q-bio]/Ecology environmentCadmiumbiomassEcologyBacteriatoxicityMercuryheavy metalContaminationDNA FingerprintingMercury (element)Microbial population biologychemistryEnvironmental chemistrySoil watermicrobial populationSoil microbiologyCopperFood ScienceBiotechnologyCadmium
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Bacteria and free-living amoeba in the Lascaux Cave.

2008

3 pages, 1 table, 18 references. The collaboration of the Lascaux restoration team is highly appreciated. We thank Marisa Chelius for valuable comments on the manuscript.

DNA BacterialeducationBenzalkonium chloridemedicine.disease_causeMicrobiologyConfined SpacesCaveFusarium solani species complexmedicineEnvironmental MicrobiologyAnimalsAir ConditioningProtozoaAmoebaMolecular Biology[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyFree living amoebaEcosystemgeographygeography.geographical_feature_categorybiologyBacteriaEcologyOutbreakfood and beveragesLascaux CavePathogenic bacteriaGeneral Medicinesocial sciencesDNA Protozoanbiology.organism_classificationmusculoskeletal systemhumanities[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyArchaeologyBiofilmsProtozoaPaintingsFrancePathogensBacteriaEnvironmental MonitoringResearch in microbiology
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An AFLP clock for the absolute dating of shallow-time evolutionary history based on the intraspecific divergence of southwestern European alpine plan…

2009

The dating of recent events in the history of organisms needs divergence rates based on molecular fingerprint markers. Here, we used amplified fragment length polymorphisms (AFLPs) of three distantly related alpine plant species co-occurring in the Spanish Sierra Nevada, the Pyrenees and the southwestern Alps/Massif Central to establish divergence rates. Within each of these species (Gentiana alpina, Kernera saxatilis and Silene rupestris), we found that the degree of AFLP divergence (D(N72)) between mountain phylogroups was significantly correlated with their time of divergence (as inferred from palaeoclimatic/palynological data), indicating constant AFLP divergence rates. As these rates d…

DNA PlantAlpine plantPopulationCaryophyllaceaeIntraspecific competitionDivergenceEvolution MolecularSpecies SpecificityGeneticsVicarianceGentianaAmplified Fragment Length Polymorphism AnalysiseducationEcology Evolution Behavior and SystematicsEcosystemPhylogenyeducation.field_of_studybiologyModels GeneticEcologySequence Analysis DNAPlantsbiology.organism_classificationSilene rupestrisEuropeGenetics PopulationMinuartiaBrassicaceaeMutationRegression AnalysisAmplified fragment length polymorphismMolecular ecology
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Vulnerability of the North Water ecosystem to climate change

2021

High Arctic ecosystems and Indigenous livelihoods are tightly linked and exposed to climate change, yet assessing their sensitivity requires a long-term perspective. Here, we assess the vulnerability of the North Water polynya, a unique seaice ecosystem that sustains the world’s northernmost Inuit communities and several keystone Arctic species. We reconstruct mid-to-late Holocene changes in sea ice, marine primary production, and little auk colony dynamics through multi-proxy analysis of marine and lake sediment cores. Our results suggest a productive ecosystem by 4400–4200 cal yrs b2k coincident with the arrival of the first humans in Greenland. Climate forcing during the late Holocene, l…

DYNAMICS010504 meteorology & atmospheric sciencesEcosystem ecologyGeneral Physics and AstronomyPalaeoclimate01 natural sciencespalaeoceanographyPalaeoceanographyTEMPERATURESilmastoHOLOCENEHolocene[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere0303 health sciencesarktinen alueMultidisciplinaryEcologyAquatic ecosystemQClimate-change ecologyecosystem ecologyRECORDGREENLANDVARIABILITY[SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/ClimatologylämpeneminenSEA-ICEEcosystem ecologyATLANTIC OSCILLATIONSEDIMENTSclimate-change ecologyScienceGrönlantiClimate changeinuititpalaeoclimateGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesddc:570EcosystemRECONSTRUCTION14. Life underwaterKeystone species1172 Environmental sciences[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography030304 developmental biology0105 earth and related environmental sciencesGlobal warmingGeneral Chemistry15. Life on landilmastonmuutoksetekosysteemit (ekologia)Arctic13. Climate actionmerijääpaleoklimatologiaNature Communications
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Integrating fire-scar, charcoal and fungal spore data to study fire events in the boreal forest of northern Europe

2019

Fire is a major disturbance agent in the boreal forest, influencing many current and future ecosystem conditions and services. Surprisingly few studies have attempted to improve the accuracy of fire-event reconstructions even though the estimates of the occurrence of past fires may be biased, influencing the reliability of the models employing those data (e.g. C stock, cycle). This study aimed to demonstrate how three types of fire proxies – fire scars from tree rings, sedimentary charcoal and, for the first time in this context, fungal spores of Neurospora – can be integrated to achieve a better understanding of past fire dynamics. By studying charcoal and Neurospora from sediment cores f…

DYNAMICS010506 paleontologyArcheologyPeat010504 meteorology & atmospheric sciencesPEATLONG-TERM HISTORYnon-pollen palynomorphs01 natural sciencesRussiaTREE-RING RECORDSBOGHOLOCENEEcosystemFire ecologyCharcoalBogFinland1172 Environmental sciences0105 earth and related environmental sciencesEarth-Surface ProcessesGlobal and Planetary Changegeography4112 Forestrygeography.geographical_feature_categoryEcologyTaigaPaleontologyForestry15. Life on landPICEA-ABIESTAIGA FORESTNeurosporatree ringsDisturbance (ecology)13. Climate actionvisual_artforest hollowvisual_art.visual_art_mediumEnvironmental scienceWoody plant
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Arbuscular mycorrhizal fungi influence host infection during epidemics in a wild plant pathosystem

2022

SummaryWhile pathogenic and mutualistic microbes are ubiquitous across ecosystems and often co-occur within hosts, how they interact to determine patterns of disease in genetically diverse wild populations is unknown.To test whether microbial mutualists provide protection against pathogens, and whether this varies among host genotypes, we conducted a field experiment in three naturally-occurring epidemics of a fungal pathogen, Podosphaera plantaginis, infecting a host plant, Plantago lanceolata, in the Åland Islands, Finland. In each population, we collected epidemiological data on experimental plants from six allopatric populations that had been inoculated with a mixture of mutualistic arb…

DYNAMICS0106 biological scienceshärmätPhysiologyDIVERSITYPlant ScienceDisease01 natural sciencesLOCAL ADAPTATIONMycorrhizae1110 Plant ScienceGenotypemykorritsasienetDISEASE RESISTANCEkasvitauditheinäratamo11832 Microbiology and virology2. Zero hungerprotective symbiont0303 health scienceseducation.field_of_studyPlantagoPodosphaera plantaginisPlantsplant pathogenmycorrhizal fungitaudinaiheuttajatSusceptible individual590 Animals (Zoology)GenotypemutualismPopulationAllopatric speciationZoologyBiologyPATHOGEN METAPOPULATION010603 evolutionary biologyMULTITROPHIC INTERACTIONS10127 Institute of Evolutionary Biology and Environmental Studies03 medical and health sciencesPlantago lanceolataEcosystemSymbiosiseducationPlantagoEcosystemplant diseasemutualismi (biologia)030304 developmental biologyHost Microbial InteractionsHost (biology)INDUCED RESISTANCEFungi1314 Physiology15. Life on land11831 Plant biologybiology.organism_classificationEVOLUTIONhärmäsienetMICROBE-MICROBE INTERACTIONS570 Life sciences; biologyMicrobial Interactionspowdery mildewNew Phytologist
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Analysis of the linkages between rainfall and land surface conditions in the West African monsoon through CMAP, ERS-WSC, and NOAA-AVHRR data

2005

International audience; The European Remote Sensing Wind Scatterometer (ERS-WSC) backscattering coefficient, NOAA Advanced Very High Resolution Radiometer (NOAA-AVHRR) Normalized Difference Vegetation Index (NDVI), and Climate Prediction Center Merged Analysis Precipitation ( CMAP) precipitation data sets are studied over the period August 1991 to December 2000 to document ( 1) the interannual and intra-annual evolutions of vegetation photosynthetic activity and soil-vegetation water content over West Africa and ( 2) their two-way links with precipitation. Over the Sahel, at interannual timescales the strongest relationships between vegetation, soil moisture, and precipitation are observed …

DYNAMICSAtmospheric Science010504 meteorology & atmospheric sciencesAdvanced very-high-resolution radiometerDIFFERENCE VEGETATION INDEX0211 other engineering and technologiesSoil ScienceTIME-SERIES02 engineering and technologyWIND SCATTEROMETER DATAAquatic ScienceOceanographyMonsoonSOIL-MOISTURE01 natural sciencesNormalized Difference Vegetation Index[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsGeochemistry and PetrologyCIRCULATIONSEarth and Planetary Sciences (miscellaneous)[ SDU.ENVI ] Sciences of the Universe [physics]/Continental interfaces environmentPrecipitation[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentWater contentTEMPERATURE021101 geological & geomatics engineering0105 earth and related environmental sciencesEarth-Surface ProcessesWater Science and TechnologyEcologyMoisturePaleontologyForestry15. Life on landScatterometerVARIABILITYGeophysics13. Climate actionSpace and Planetary ScienceClimatologyPRECIPITATIONSoil waterEnvironmental scienceSAHEL RAINFALL
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Effects of environment and genotype on dispersal differ across departure, transfer and settlement in a butterfly metapopulation

2022

Active dispersal is driven by extrinsic and intrinsic factors at the three stages of departure, transfer and settlement. Most empirical studies capture only one stage of this complex process, and knowledge of how much can be generalized from one stage to another remains unknown. Here we use genetic assignment tests to reconstruct dispersal across 5 years and 232 habitat patches of a Glanville fritillary butterfly ( Melitaea cinxia ) metapopulation. We link individual dispersal events to weather, landscape structure, size and quality of habitat patches, and individual genotype to identify the factors that influence the three stages of dispersal and post-settlement survival. We found that ne…

DYNAMICSGenotypePopulation DynamicsperhosetEMIGRATIONgenotyyppiGeneral Biochemistry Genetics and Molecular Biologypatch qualitybutterflyAnimalsdispersaltäpläverkkoperhonenWeathergenotype-by-environment interactionsEcosystemGeneral Environmental ScienceEkologiPERSONALITYCONSEQUENCESgenetic assignment testsEcologyGeneral Immunology and MicrobiologyMELITAEA-CINXIAlevinneisyysGeneral MedicineGENEpopulaatioekologiafitnessASSIGNMENT TESTSHABITAT FRAGMENTATIONMETABOLIC-RATE1181 Ecology evolutionary biologypatchqualityGeneral Agricultural and Biological SciencesButterfliesleviäminenFRITILLARYProceedings of the Royal Society B: Biological Sciences
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Integrating Decomposers, Methane-Cycling Microbes and Ecosystem Carbon Fluxes Along a Peatland Successional Gradient in a Land Uplift Region

2021

AbstractPeatlands are carbon dioxide (CO2) sinks that, in parallel, release methane (CH4). The peatland carbon (C) balance depends on the interplay of decomposer and CH4-cycling microbes, vegetation, and environmental conditions. These interactions are susceptible to the changes that occur along a successional gradient from vascular plant-dominated systems to Sphagnum moss-dominated systems. Changes similar to this succession are predicted to occur from climate change. Here, we investigated how microbial and plant communities are interlinked with each other and with ecosystem C cycling along a successional gradient on a boreal land uplift coast. The gradient ranged from shoreline to meadows…

DYNAMICSPeatecosystem respirationmethane emissionSphagnumCOMMUNITY COMPOSITIONDecomposerCO2 EXCHANGEbakteeritmethanotrophsmethanogensturvemaatBogFUNGALBiomass (ecology)geography.geographical_feature_categoryEcologybiologyEcologyFUNCTIONAL TYPEShiilen kiertofood and beveragesactinobacteriaFEN ECOSYSTEMprimary paludification1181 Ecology evolutionary biologymicrobial communityEcosystem respirationsienetWATER-LEVEL DRAWDOWNTERMmetaaniEnvironmental ChemistryEcosystembiomassa (ekologia)PLANT-COMMUNITIESVEGETATION SUCCESSION1172 Environmental sciencesEcology Evolution Behavior and Systematicsgeographymicrobial biomassbiology.organism_classificationpeatland developmentmaankohoaminenmikrobistoMicrobial population biologyACTINOBACTERIAL COMMUNITIEShiilinielutEnvironmental sciencefungipeatland development.Ecosystems
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