Search results for "EXPRESSION"

showing 10 items of 5168 documents

Arbuscular mycorrhizal symbiosis mitigates the negative effects of salinity on durum wheat

2017

Arbuscular mycorrhizal (AM) symbiosis is generally considered to be effective in ameliorating the plant tolerance to salt stress. Unfortunately, the comprehension of the mechanisms implicated in salinity stress alleviation by AM symbiosis is far from being complete. Thus, an experiment was performed by growing durum wheat (Triticum durum Desf.) plants under salt-stress conditions to evaluate the influence of AM symbiosis on both the plant growth and the regulation of a number of genes related to salt stress and nutrient uptake. Durum wheat plants were grown outdoors in pots in absence or in presence of salt stress and with or without AM fungi inoculation. The inoculum consisted of a mixture…

0106 biological sciences0301 basic medicineRhizophagus irregularisSalinityLeavesGene Expressionlcsh:MedicinePlant SciencePlant RootsPolymerase Chain ReactionPhysical Chemistry01 natural sciencesNutrientMycorrhizaePlant Resistance to Abiotic Stresslcsh:ScienceTriticumBiomass (ecology)MultidisciplinaryEcologyPlant Anatomyfood and beveragesSalt TolerancePlantsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeChemistryPlant PhysiologyPhysical SciencesWheatSymbiosiResearch ArticleBiology03 medical and health sciencesSymbiosisSettore AGR/07 - Genetica AgrariaPlant-Environment InteractionsBotanyGeneticsPlant DefensesGene RegulationGrassesSymbiosisBiochemistry Genetics and Molecular Biology (all)InoculationGene Expression ProfilingPlant EcologyEcology and Environmental Scienceslcsh:RfungiOrganismsFungiBiology and Life SciencesPlant RootPlant Pathologybiology.organism_classificationSporeSalinitySpecies Interactions030104 developmental biologyAgricultural and Biological Sciences (all)Chemical PropertiesArbuscular mycorrhizal symbiosislcsh:QSalt-Tolerance010606 plant biology & botanyPLOS ONE
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Expression properties exhibit correlated patterns with the fate of duplicated genes, their divergence, and transcriptional plasticity in Saccharomyco…

2017

Gene duplication is an important source of novelties and genome complexity. What genes are preserved as duplicated through long evolutionary times can shape the evolution of innovations. Identifying factors that influence gene duplicability is therefore an important aim in evolutionary biology. Here, we show that in the yeast Saccharomyces cerevisiae the levels of gene expression correlate with gene duplicability, its divergence, and transcriptional plasticity. Genes that were highly expressed before duplication are more likely to be preserved as duplicates for longer evolutionary times and wider phylogenetic ranges than genes that were lowly expressed. Duplicates with higher expression lev…

0106 biological sciences0301 basic medicineSaccharomyces cerevisiae ProteinsGene duplicationDuplicabilityPlant Biology & BotanySaccharomyces cerevisiaeSaccharomyces cerevisiae01 natural sciencesDivergenceEvolution Molecular03 medical and health sciencesGenes DuplicateGene Expression Regulation FungalGene expressionGene duplicationGeneticsSelection GeneticSaccharomycotinaPromoter Regions GeneticMolecular BiologyGenePhylogenybiologyPhylogenetic treeGenetic VariationPromoterGeneral MedicineFull Papersbiology.organism_classification030104 developmental biologyEvolutionary biologyTranscriptional plasticityGene expressionGenome Fungal010606 plant biology & botany
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C3cotyledons are followed by C4leaves: intra-individual transcriptome analysis ofSalsola soda(Chenopodiaceae)

2016

The genome of Salsola soda allows a transition from C3 to C4 photosynthesis. A developmental transcriptome series revealed novel genes showing expression patterns similar to those encoding C4 proteins.

0106 biological sciences0301 basic medicineSalsolaC4 photosynthesisfood.ingredientSalsolaPhysiologyPlant ScienceChenopodiaceaecotyledonBiology01 natural sciences03 medical and health sciencesfoodRNA seqBotanyPhotosynthesisChenopodiaceaedevelopmentSalsola sodaCarbon IsotopesleafCaryophyllalesGene Expression Profilingfood and beveragesbiology.organism_classificationCaryophyllalesPlant Leaves030104 developmental biologyMRNA SequencingSeedlingTranscriptomePhosphoenolpyruvate carboxylaseCotyledonResearch Paper010606 plant biology & botanyJournal of Experimental Botany
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The Pseudomonas fluorescens Siderophore Pyoverdine Weakens Arabidopsis thaliana Defense in Favor of Growth in Iron-Deficient Conditions

2016

SPE EA BIOME IPM UB INRA; International audience; Pyoverdines are siderophores synthesized by fluorescent Pseudomonas spp. Under iron-limiting conditions, these high-affinity ferric iron chelators are excreted by bacteria in the soil to acquire iron. Pyoverdines produced by beneficial Pseudomonas spp. ameliorate plant growth. Here, we investigate the physiological incidence and mode of action of pyoverdine from Pseudomonas fluorescens C7R12 on Arabidopsis (Arabidopsis thaliana) plants grown under iron-sufficient or iron-deficient conditions. Pyoverdine was provided to the medium in its iron-free structure (apo-pyoverdine), thus mimicking a situation in which it is produced by bacteria. Rema…

0106 biological sciences0301 basic medicineSiderophoreAgronomieFMN ReductasePhysiologyIronArabidopsis[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomySiderophoresPseudomonas fluorescensPlant Science[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyPseudomonas fluorescens01 natural sciencesMicrobiology03 medical and health scienceschemistry.chemical_compoundEthylene[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyGene Expression Regulation PlantArabidopsisGeneticsmedicineArabidopsis thalianaHomeostasisCation Transport Proteins2. Zero hungerPyoverdinebiologyIndoleacetic AcidsArabidopsis ProteinsScience des solsGene Expression ProfilingPseudomonasfood and beveragesArticlesEthylenesbiology.organism_classification030104 developmental biologychemistryFerricSalicylic AcidOligopeptidesBacteria010606 plant biology & botanymedicine.drugAbscisic Acid
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Enhancing heterologous protein expression and secretion in HEK293 cells by means of combination of CMV promoter and IFNα2 signal peptide

2016

Efficient production and secretion of recombinant proteins in mammalian cell lines relies in a combination of genetic, metabolic and culture strategy factors. The present work assesses the influence of two key genetic components of expression vectors (promoter and signal peptide) on protein production and secretion effciency in HEK293 cells expressing eGFP as a reporter protein. Firstly, the strength of 3 different promoters was evaluated using transient expression methods. Flow cytometry analysis revealed that the highest level of intracellular protein expression was found when eGFP was under the control of CMV promoter, being 3-times higher in comparison to the rest of the promoters teste…

0106 biological sciences0301 basic medicineSignal peptideGreen Fluorescent ProteinsCytomegalovirusHeterologousBioengineeringProtein Sorting SignalsBiology01 natural sciencesApplied Microbiology and BiotechnologyGreen fluorescent protein03 medical and health sciences010608 biotechnologyProtein biosynthesisHumansSecretionPromoter Regions GeneticExpression vectorInterferon-alphaPromoterGeneral MedicineMolecular biologyRecombinant ProteinsHEK293 Cells030104 developmental biologyCell cultureBiotechnologyJournal of Biotechnology
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Molecular Responses to Small Regulating Molecules against Huanglongbing Disease

2016

Huanglongbing (HLB; citrus greening) is the most devastating disease of citrus worldwide. No cure is yet available for this disease and infected trees generally decline after several months. Disease management depends on early detection of symptoms and chemical control of insect vectors. In this work, different combinations of organic compounds were tested for the ability to modulate citrus molecular responses to HLB disease beneficially. Three small-molecule regulating compounds were tested: 1) L-arginine, 2) 6-benzyl-adenine combined with gibberellins, and 3) sucrose combined with atrazine. Each treatment contained K-phite mineral solution and was tested at two different concentrations. T…

0106 biological sciences0301 basic medicineSucroseLeavesCitruslcsh:MedicineGene ExpressionSecondary MetabolismPlant ScienceDisaccharidesBiochemistry01 natural sciencesStarchesGene Expression Regulation PlantINFECTIONMedicine and Health SciencesInnatePlant HormonesAmino Acidslcsh:ScienceImmune ResponseGENE-EXPRESSIONMultidisciplinaryNONHOST RESISTANCEbiologyOrganic CompoundsPlant BiochemistryPlant AnatomyChemistryPhenotypeBiochemistryDEFENSE RESPONSESCANDIDATUS-LIBERIBACTER-ASIATICUS; ARABIDOPSIS-THALIANA; NONHOST RESISTANCE; DEFENSE RESPONSES; CITRUS-SINENSIS; GENE-EXPRESSION; INFECTION; PLANTS; IDENTIFICATION; TRANSCRIPTOMEPhysical SciencesHost-Pathogen InteractionsCarbohydrate MetabolismSucrose synthaseAtrazineGibberellinBasic Amino AcidsStarch synthaseSystemic acquired resistanceResearch ArticleCITRUS-SINENSISGeneral Science & TechnologyPhysiologicalImmunologyCarbohydratesCarbohydrate metabolismStressArginine03 medical and health sciencesStress PhysiologicalSettore AGR/07 - Genetica AgrariaGeneticsPLANTSTRANSCRIPTOMESecondary metabolismGenePlant DiseasesIDENTIFICATIONGene Expression Profilinglcsh:ROrganic ChemistryImmunityChemical CompoundsBiology and Life SciencesProteinsPlantBiotic stressCANDIDATUS-LIBERIBACTER-ASIATICUSHormonesGibberellinsImmunity InnateMetabolism030104 developmental biologyGene Expression RegulationARABIDOPSIS-THALIANAbiology.proteinlcsh:Q010606 plant biology & botanyPLOS ONE
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Thioredoxin (Trxo1) interacts with proliferating cell nuclear antigen (PCNA) and its overexpression affects the growth of tobacco cell culture.

2017

Thioredoxins (Trxs), key components of cellular redox regulation, act by controlling the redox status of many target proteins, and have been shown to play an essential role in cell survival and growth. The presence of a Trx system in the nucleus has received little attention in plants, and the nuclear targets of plant Trxs have not been conclusively identified. Thus, very little is known about the function of Trxs in this cellular compartment. Previously, we studied the intracellular localization of PsTrxo1 and confirmed its presence in mitochondria and, interestingly, in the nucleus under standard growth conditions. In investigating the nuclear function of PsTrxo1 we identified proliferati…

0106 biological sciences0301 basic medicineTFs transcription factorsOverexpressionBiologíaBiFC bimolecular fluorescence complementationClinical BiochemistryCell Culture TechniquesTobacco BY-2 cells01 natural sciencesBiochemistryTBY-2 tobacco bright yellow-2DTT 14-dithiothreitolBimolecular fluorescence complementationThioredoxinsGene Expression Regulation PlantTrx thioredoxinlcsh:QH301-705.5GFP green fluorescent proteinlcsh:R5-920biologyProliferating cell nuclear antigen (PCNA)Cell cycleGlutathione3. Good healthCell biologyMitochondriaNTR NADPH thioredoxin reductaseProtein TransportDEM diethyl maleateRT-qPCR Reverse transcription quantitative polymerase chain reactionThioredoxinlcsh:Medicine (General)Oxidation-ReductionAMS 4-acetamido-4-maleimidylstilbene-22-disulfonic acidResearch PaperPCNA proliferating cell nuclear antigenOex overexpressingCell cycleNucleusThioredoxin o103 medical and health sciencesROS reactive oxygen speciesDownregulation and upregulationProliferating Cell Nuclear AntigenTobaccoDAPI 46-diamidine-2-phenylindolmCBM monochlorobimaneCellular compartmentCell NucleusCell growthOrganic ChemistryBotánicaPeasMolecular biologyYFP yellow fluorescent proteinProliferating cell nuclear antigenTBS Tris-buffered salineOD optical density030104 developmental biologylcsh:Biology (General)Cell cultureRNA reactive nitrogen speciesbiology.proteinPrx peroxiredoxinBSA bovine serum albumin010606 plant biology & botanyRedox biology
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Trichoderma harzianum Strain T22 Modulates Direct Defense of Tomato Plants in Response to Nezara viridula Feeding Activity

2021

AbstractPlant growth-promoting fungi belonging to genus Trichoderma are known to help plants when dealing with biotic stressors by enhancing plant defenses. While beneficial effects of Trichoderma spp. against plant pathogens have long been documented, fewer studies have investigated their effect on insect pests. Here, we studied the impact of Trichoderma root colonization on the plant defense responses against stink bug feeding attack. For this purpose, a model system consisting of tomato plant, Solanum lycopersicum cv Dwarf San Marzano, Trichoderma harzianum strain T22 and the southern green stink bug, Nezara viridula, was used. We firstly determined stink bug performance in terms of rela…

0106 biological sciences0301 basic medicineTime FactorsTranscription GeneticGreen stink bugBeneficial soil microbes Jasmonic acid signaling pathway Pentatomidae Solanum lycopersicum Stink bugsCyclopentanesGenes PlantPlant Roots01 natural sciencesBiochemistryArticleHeteroptera03 medical and health scienceschemistry.chemical_compoundSolanum lycopersicumGene Expression Regulation PlantPentatomidaePlant defense against herbivoryAnimalsHerbivoryOxylipinsSymbiosisStink bugsEcology Evolution Behavior and SystematicsbiologyBeneficial soil microbesJasmonic acidfungifood and beveragesTrichoderma harzianumGeneral MedicinePentatomidaebiology.organism_classificationHorticulture030104 developmental biologychemistryNezara viridulaJasmonic acid signaling pathwayTrichodermaHypocrealesSeedsFemaleSolanumSignal Transduction010606 plant biology & botany
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Polyamine Oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress to…

2017

The family of polyamine oxidases (PAO) in Arabidopsis (AtPAO1-5) mediates polyamine (PA) back-conversion, which reverses the PA biosynthetic pathway from spermine, and its structural isomer thermospermine (tSpm), into spermidine and then putrescine. Here, we have studied the involvement of PA back-conversion in Arabidopsis salinity tolerance. AtPAO5 is the Arabidopsis PAO gene member most transcriptionally induced by salt stress. Two independent loss-of-function mutants (atpao5-2 and atpao5-3) were found to exhibit constitutively higher tSpm levels, with associated increased salt tolerance. Using global transcriptional and metabolomic analyses, the underlying mechanisms were studied. Stimul…

0106 biological sciences0301 basic medicineTranscription GeneticArabidopsis thalianaPhysiologyArabidopsisSperminePlant ScienceSodium Chloride01 natural scienceschemistry.chemical_compoundGene Expression Regulation PlantLoss of Function MutationArabidopsisPolyaminesMetabolitesArabidopsis thalianaPoliaminesAbscisic acidPrincipal Component AnalysisbiologyAgricultural SciencesSalt ToleranceMetabòlitsmetabolomicsPhenotypeBiochemistryMultigene FamilyMetabolomeCitric Acid CycleSalsCyclopentanes03 medical and health sciencesStress PhysiologicalOxylipinsRNA MessengerIonssalt toleranceArabidopsis ProteinsGene Expression ProfilingSodiumHydrogen PeroxideAgriculture Forestry and Fisheriesbiology.organism_classificationSpermidineGene Ontology030104 developmental biologychemistrythermosperminePutrescineSpermineSaltsOxidoreductases Acting on CH-NH2 Group DonorsTranscriptomejasmonatesPolyaminePolyamine oxidaseAbscisic Acid010606 plant biology & botany
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Symbiotic polydnavirus and venom reveal parasitoid to its hyperparasitoids

2018

Symbiotic relationships benefit organisms in utilization of new niches. In parasitoid wasps, symbiotic viruses and venom that are injected together with wasp eggs into the host caterpillar suppress immune responses of the host and enhance parasitoid survival. We found that the virus also has negative effects on offspring survival when placing these interactions in a community context. The virus and venom drive a chain of interactions that includes the herbivore and its food plant and attracts the hyperparasitoid enemies of the parasitoid. Our results shed new light on the importance of symbionts associated with their host in driving ecological interactions and highlight the intricacy of how…

0106 biological sciences0301 basic medicineWasps01 natural sciencesMultitrophic interactionParasitoidHerbivore-induced plant volatilesGene Expression Regulation PlantLaboratory of EntomologyTrophic levelPlant-mediatedLarvaMultidisciplinarybiologyPolydnavirusHerbivore-induced plant volatilePlantsBiological SciencesWaspPE&RCOrganische ChemieBiosystematiekInteraction networkinternationalLarvaSymbiosiButterfliesZoology010603 evolutionary biologyHost-Parasite Interactions03 medical and health sciencesMultitrophic interactionsSymbiosisButterflieAnimalsSymbiosisCaterpillarSalivaEcosystemHerbivoreParasitic waspVenomsHost (biology)AnimalOrganic ChemistryfungiPlantLaboratorium voor Entomologiebiology.organism_classificationVenom030104 developmental biologySettore AGR/11 - Entomologia Generale E ApplicataPolydnaviridaeHerbivoreBiosystematicsEPS
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