Search results for "Elongation"

showing 10 items of 145 documents

Ofd1, a Human Disease Gene, Regulates the Length and Distal Structure of Centrioles

2010

SUMMARYCentrosomes and their component centrioles represent the principal microtubule organizing centers of animal cells. Here we show that the gene underlying Orofaciodigital Syndrome 1, Ofd1, is a component of the distal centriole that controls centriole length. In the absence of Ofd1, distal regions of centrioles, but not procentrioles, elongate abnormally. These long centrioles are structurally similar to normal centrioles, but contain destabilized microtubules with abnormal post-translational modifications. Ofd1 is also important for centriole distal appendage formation and centriolar recruitment of the intraflagellar transport protein Ift88. To model OFD1 Syndrome in embryonic stem ce…

G2 PhaseCentrioleMicrotubule-associated proteinMutation MissenseHUMDISEASECell Cycle ProteinsBiologyMicrotubulesModels BiologicalArticleGeneral Biochemistry Genetics and Molecular BiologyCentriole elongationCell LineMiceIntraflagellar transportCiliogenesisAnimalsHumansBasal bodyMolecular BiologyEmbryonic Stem CellsCentriolesTumor Suppressor ProteinsProteinsCell BiologyOrofaciodigital SyndromesPhosphoproteinsRecombinant ProteinsCell biologyCentrosomeCELLBIOCentriolar satelliteMicrotubule-Associated ProteinsDevelopmental Biology
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RAB3GAP1 and RAB3GAP2 modulate basal and rapamycin-induced autophagy

2014

Macroautophagy is a degradative pathway that sequesters and transports cytosolic cargo in autophagosomes to lysosomes, and its deterioration affects intracellular proteostasis. Membrane dynamics accompanying autophagy are mostly elusive and depend on trafficking processes. RAB GTPase activating proteins (RABGAPs) are important factors for the coordination of cellular vesicle transport systems, and several TBC (TRE2-BUB2-CDC16) domain-containing RABGAPs are associated with autophagy. Employing C. elegans and human primary fibroblasts, we show that RAB3GAP1 and RAB3GAP2, which are components of the TBC domain-free RAB3GAP complex, influence protein aggregation and affect autophagy at basal an…

GTPase-activating proteinlipid dropletsrab3 GTP-Binding ProteinsATG16L1DMSO dimethyl sulfoxideFEZ20302 clinical medicineATG autophagy-relatedPhagosomesDAPI 4’ 6-diamidino-2-phenylindoleSQSTM1 sequestosome 1ATG16L1MAP1LC3 microtubule-associated protein 1 light chain 3GFP green fluorescent protein0303 health sciencesGABARAP GABA(A) receptor-associated proteinGTPase-Activating ProteinsCell biologyRAB3GAP1RAB3GAP2RABGAP RAB GTPase activating proteinATG3autophagyCALCOCO2 calcium binding and coiled-coil domain 2Basic Research PaperseV empty vectorATG8ATG5PBS phosphate-buffered salineBiologyPE phosphatidylethanolamineTBC domain TRE2-BUB2-CDC16 domainBAG3GEF guanine nucleotide exchange factor03 medical and health sciencesC. elegans Caenorhabditis elegansAnimalsHumansCaenorhabditis elegansMolecular Biology030304 developmental biologySirolimusDPH 1 6-diphenyl-1 3 5-hexatrieneproteostasisAutophagyBiological TransportCell BiologyFEZ1Bafi bafilomycin A1FEZ fasciculation and elongation protein zetaNBR1 neighbor of BRCA1 gene 1ProteostasissiRNA small interfering RNABSA bovine serum albuminRabLysosomes030217 neurology & neurosurgeryAutophagy
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A Gene-Specific Requirement for FACT during Transcription Is Related to the Chromatin Organization of the Transcribed Region

2006

The FACT complex stimulates transcription elongation on nucleosomal templates. In vivo experiments also involve FACT in the reassembly of nucleosomes traversed by RNA polymerase II. Since several features of chromatin organization vary throughout the genome, we wondered whether FACT is equally required for all genes. We show in this study that the in vivo depletion of Spt16, one of the subunits of Saccharomyces cerevisiae FACT, strongly affects transcription of three genes, GAL1, PHO5, and Kluyveromyces lactis LAC4, which exhibit positioned nucleosomes at their transcribed regions. In contrast, showing a random nucleosome structure, YAT1 and Escherichia coli lacZ are only mildly influenced …

GeneticsChromatin ImmunoprecipitationSaccharomyces cerevisiae ProteinsTranscription GeneticbiologyHigh Mobility Group ProteinsRNA polymerase IIPromoterArticlesSaccharomyces cerevisiaeCell BiologyFACT complexChromatinChromatin remodelingChromatinDNA-Binding ProteinsHistone methylationProtein FACTEscherichia colibiology.proteinTranscriptional Elongation FactorsTranscription factor II DMolecular BiologyRNA polymerase II holoenzymePlasmidsMolecular and Cellular Biology
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Conserved and newly acquired roles of PIF1 homologs in tomato (Solanum lycopersicum)

2021

ABSTRACTPHYTOCHROME INTERACTING FACTORS (PIFs) are transcription factors that interact with the photoreceptors phytochromes and integrate multiple signaling pathways related to light, temperature, defense and hormone responses. PIFs have been extensively studied inArabidopsis thaliana, but less is known about their roles in other species. Here, we investigate the role of the two homologs of PIF1 found in tomato (Solanum lycopersicum), namely PIF1a and PIF1b. Analysis of gene expression showed very different patterns, indicating a potential evolutionary divergence in their roles. At the protein level, light regulated the stability of PIF1a, but not PIF1b, further supporting a functional dive…

GeneticsPhytochromeArabidopsisMutantfood and beveragesArabidopsis thalianaNeofunctionalizationBiologySolanumRoot hair elongationbiology.organism_classificationFunctional divergence
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A study of reproducibility of kinesiology tape applications: review, reliability and validity

2017

Abstract Background Literature addressing the mechanical properties of kinesiology tape is quite scarce. There are no studies which focus on the mechanical characteristics of kinesiology tape, its mechanical properties, nor its adherence following the ISO international standard test methods for tape elongation. Methods This study quantified the mechanical characteristics of 380 samples of kinesiology tape from 19 different brands and in 4 different colors using a dynamometer. Mechanical testing was controlled by UNE EN ISO 13934-1. Results Significant differences were found between tape brands in terms of grammage, maximum force tenacity, work, pre-elongation and percentage elongation (P < …

GrammageMechanical processeslcsh:Diseases of the musculoskeletal systemeducationMuscle Strength DynamometerStrain03 medical and health sciences0302 clinical medicineRheumatologyHumansMedicineOrthopedics and Sports MedicineElongationReliability (statistics)030203 arthritis & rheumatology030222 orthopedicsReproducibilityDynamometerKinesiologybusiness.industryWork (physics)Mechanical ProcessesReproducibility of ResultsInjury preventionEquipment DesignProprioceptionAthletic TapeAdherenceKinesiology Appliedlcsh:RC925-935businessResearch ArticleBiomedical engineering
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Intraspecific and within-isolate sequence variation in the ITS rRNA gene region of Pythium mercuriale sp. nov. (Pythiaceae)

2008

Belbahri, Lassaad et al.

HeterozygoteNuclear geneGenotypeMolecular Sequence DataPythiumBiologyDNA RibosomalMicrobiologyDNA AlgalPeptide Elongation Factor 1Intergenic regionTubulinPhylogeneticsDNA Ribosomal SpacerGeneticsCluster AnalysisPythiumInternal transcribed spacerMolecular BiologyAllelesPhylogenyGeneticsPolymorphism GeneticPhylogenetic treeAlgal ProteinsGenes rRNASequence Analysis DNARibosomal RNAbiology.organism_classificationPythiaceaePhenotype
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Reversible hydrogen bond network dynamics: molecular dynamics simulations of calix[4]arene-catenanes.

2011

We present detailed molecular dynamics (MD) simulations of mechanically interlocked calix[4]arene-catenanes under external force. Single-molecule force spectroscopy experiments revealed that the separation of dimers with two aliphatic loops results in reversible hydrogen bond breakage through an intermediate in a triple-well potential, while the tetra-loop species separates in a one-step manner (Janke, M.; et al. Nat. Nanotechnol. 2009, 4, 225). MD simulations show that calix[4]arenes interlocked by four loops (1) display a complete restructuring of the hydrogen bond network under mechanical force. All hydrogen bonds of the closed structure open, and new ones are formed in the extended stru…

Hydrogen bondCatenaneForce spectroscopy02 engineering and technology010402 general chemistry021001 nanoscience & nanotechnology01 natural sciencesDissociation (chemistry)0104 chemical sciencesSurfaces Coatings and Filmschemistry.chemical_compoundMolecular dynamicsCrystallographyMonomerchemistryBreakageMaterials ChemistryPhysical and Theoretical ChemistryElongation0210 nano-technologyThe journal of physical chemistry. B
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The influence of external uniaxial stretching on the electromigration and diffusion of hydrogen in iron

2009

Electromigration and diffusion of hydrogen in iron, depending on unit elongation, were investigated. The resistivity method was applied in the investigations. It was found that the obtained experimental results cannot be described by means of a single flux of hydrogen, which diffuses in the electric field. In order to explain the obtained results, we assumed the existence of the following two fluxes of hydrogen in the stretched metal: migration, according to the interstitial mechanism, and migration according to the interstitial-defective mechanism. The dependence of effective valences and diffusion coefficients for both mechanisms were determined.

HydrogenCondensed matter physicschemistry.chemical_elementThermodynamicsGeneral ChemistryCondensed Matter PhysicsElectromigrationMetalCondensed Matter::Materials ScienceFlux (metallurgy)chemistryElectrical resistivity and conductivityElectric fieldvisual_artvisual_art.visual_art_mediumGeneral Materials ScienceElongationJournal of Physics and Chemistry of Solids
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Biopolymeric bilayer films produced by co-extrusion film blowing

2018

Abstract Biodegradable packaging promises a more environmentally friendly future. Nevertheless, a single biopolymer often lacks of some important properties. In order to contribute to this challenge, biodegradable bilayer films from poly(lactic acid) (PLA) and MaterBi® were prepared in this work and compared with monolayer films obtained with both the polymers. The prepared films were fully characterized through morphological, mechanical, thermal, chemical, optical and water contact angle analyses. Furthermore, the hydrolytic degradation of monolayer and bilayer films was studied by performing tests at three different pH. The morphological analysis revealed that PLA/MaterBi bilayer films sh…

Hydrolytic degradationMaterials sciencePolymers and Plastics02 engineering and technologyengineering.material010402 general chemistry01 natural sciencesContact anglechemistry.chemical_compoundMonolayerPolymer chemistrychemistry.chemical_classificationpHBilayerOrganic ChemistryPolymer021001 nanoscience & nanotechnology0104 chemical sciencesLactic acidchemistryChemical engineeringBilayer filmengineeringBiodegradablePLADegradation (geology)BiopolymerElongation0210 nano-technologyMelt processingPolymer Testing
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Recycling of plastics from packaging

1997

Plastic waste coming from the separate collection of packaging film was recycled and characterized. The material is a blend of low density and linear low density polyethylene and after recycling shows mechanical and rheological properties depending on the processing conditions and apparatus. High processing temperature and high residence times strongly enhance the degradation processes and reduce the mechanical properties, in particular the elongation at break. A possible use of this recycled plastic is for the production of low pressure pipes but the properties are lower than those of virgin pipe grade polyethylene. By introducing additives, like antioxidants, inert fillers and impact modi…

InertMaterials sciencePolymers and PlasticseducationPolyethyleneCondensed Matter PhysicsLinear low-density polyethylenechemistry.chemical_compoundchemistryRheologyMechanics of MaterialsMaterials ChemistryDegradation (geology)Plastic wasteRecyclingHigh-density polyethyleneComposite materialElongation
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