Search results for "Enteritis"

showing 10 items of 165 documents

Disease Burden of Rotavirus Gastroenteritis in Children Residing in Germany: A Retrospective, Hospital-based Surveillance.

2015

Background Representative, population-based epidemiologic data for gastroenteritis caused by rotavirus (RV) are rare. RV vaccines were first licensed in Europe in 2006 and recommended in 5 western federal states in 2008 or thereafter. This study establishes a baseline for assessing the impact of vaccination and delineates the RV disease burden in Germany today. Methods Nationwide data obtained from hospitals for children 0 to 10 years of age and transferred to the Federal Statistical Office were analyzed retrospectively. Acute gastroenteritis cases because of RV were identified by the International Classification of Diseases code (ICD-10) combined with the referring diagnosis-related group …

Microbiology (medical)MaleRotavirusPediatricsmedicine.medical_specialtyPopulationmedicine.disease_causeRotavirus Infections03 medical and health sciencessymbols.namesake0302 clinical medicinePublic health surveillanceCost of Illness030225 pediatricsRotavirusGermanymedicineOdds RatioHumansPublic Health Surveillance030212 general & internal medicinePoisson regressionGeography MedicaleducationChildDisease burdenRetrospective Studieseducation.field_of_studybusiness.industryInfant NewbornRotavirus VaccinesInfantRetrospective cohort studyOdds ratioGastroenteritisVaccinationHospitalizationInfectious DiseasesChild PreschoolPediatrics Perinatology and Child HealthsymbolsFemalebusinessThe Pediatric infectious disease journal
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Norovirus disease today.

2014

Microbiology (medical)Molecular EpidemiologyGenotypevirusesNorovirusGeneral MedicineDiseaseBiologymedicine.disease_causeGlobal HealthVirologyDisease OutbreaksGastroenteritisInfectious DiseasesCommunicable Disease ControlNorovirusmedicineHumansCaliciviridae InfectionsClinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases
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Characterizations of adenovirus type 41 isolates from children with acute gastroenteritis in Japan, Vietnam, and Korea.

2004

ABSTRACT Genetic and antigenic characterizations of 70 strains of adenovirus type 41 (Ad41), isolated between 1998 and 2001 from children in Japan, Vietnam, and Korea, were done by DNA restriction enzyme (RE) analysis, sequencing analysis, and monoclonal antibody (MAb)-based enzyme-linked immunosorbent assay (ELISA). Eight genome types were observed in the present study, among which D25, D26, D27, and D28 were novel genome types. These eight genome types were divided into two genome-type clusters (GTCs) based on phylogenetic analysis of the hypervariable regions (HVRs) of the hexon. GTC1 includes D1, D25, D26, D27, and D28, and the GTC2 contains D4, D12, and D22. The amino acid homologies a…

Microbiology (medical)Molecular Sequence DataRestriction MappingEnzyme-Linked Immunosorbent AssayGenome ViralBiologyGenomePolymerase Chain ReactionViruslaw.inventionRestriction mapJapanlawPhylogeneticsVirologyHumansAmino Acid SequenceChildPeptide sequencePolymerase chain reactionPhylogenyDNA PrimersKoreaPhylogenetic treeBase SequenceSequence Homology Amino AcidAdenoviruses HumanVirologyHypervariable regionGastroenteritisVietnamAcute DiseaseSequence AlignmentJournal of clinical microbiology
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Identification of a multi-reassortant G12P[9] rotavirus with novel VP1, VP2, VP3 and NSP2 genotypes in a child with acute gastroenteritis.

2015

The G12 rotavirus genotype is globally emerging to cause severe gastroenteritis in children. Common G12 rotaviruses have either a Wa-like or DS-1-like genome constellation, while some G12 strains may have unusual genome composition. In this study, we determined the full-genome sequence of a G12P[9] strain (ME848/12) detected in a child hospitalized with acute gastroenteritis in Italy in 2012. Strain ME848/12 showed a complex genetic constellation (G12-P[9]-I17-R12-C12-M11-A12-N12-T7-E6-H2), likely derived from multiple reassortment events, with the VP1, VP2, VP3 and NSP2 genes being established as novel genotypes R12, C12, M11 and N12, respectively. Gathering sequence data on human and anim…

Microbiology (medical)RotavirusGenotypingSettore MED/07 - Microbiologia E Microbiologia ClinicavirusesReassortmentHuman rotaviruGenome ViralBiologymedicine.disease_causeMicrobiologyGenomeRotavirus InfectionsReassortmentRotavirusGenotypeGeneticsmedicineHumansMolecular BiologyGenotypingGeneEcology Evolution Behavior and SystematicsPhylogenyGeneticsWhole genome sequencingViral Structural ProteinsSequence Analysis RNAStrain (biology)virus diseasesVirologyFull genome sequencingGastroenteritisInterspecies transmissionInfectious DiseasesChild PreschoolG12P[9]Reassortant VirusesInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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MLB1 Astrovirus in Children with Gastroenteritis, Italy

2014

To the Editor: Astroviruses are notable agents of gastroenteritis in many mammalian and avian hosts. Astroviruses are nonenveloped RNA small, round, viruses (SRVs) with a single-stranded, positive sense RNA of 6.1 to 7.9 kb (1). The genome contains 2 nonstructural genes, open reading frame (ORF) 1a and 1b, and a capsid gene, ORF2, with short 5′ and 3′ untranslated regions. Human astroviruses, a major cause of gastroenteritis, are classified in the human astrovirus species, comprising 8 serotypes (1). Recently, astroviruses genetically unrelated to canonical human astroviruses have been identified in human stools in several countries. These unusual astroviruses form 2 main genetic clades. On…

Microbiology (medical)SerotypeMaleLetterGenes ViralEpidemiologyvirusesMolecular Sequence Datalcsh:Medicinemedicine.disease_causeAstrovirusMicrobiologylcsh:Infectious and parasitic diseasesastrovirusfluids and secretionschildrenRotavirusMLB1 AstrovirusmedicineHumansviruseslcsh:RC109-216Letters to the EditorMLB1biologyenteric infectionslcsh:Rvirus diseasesInfantSapovirusbiology.organism_classificationmedicine.diseaseVirologyMolecular TypingDiarrheaInfectious DiseasesItalyChild PreschoolNorovirusEnterovirusAstroviridaeRNA Viralmedicine.symptomgastroenteritisEncephalitisEmerging Infectious Diseases
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Prevalence of human rotavirus serotypes in some European countries 1981-1988.

1990

An extended epidemiological survey on the circulation of the 4 established human rotavirus (HRV) serotypes in some European countries was carried out on 831 fecal strains collected from infants and young children with acute non-bacterial gastroenteritis during 1981-88. Typing was done by enzyme-linked immunosorbent assay and/or solid-phase immune electron microscopy using VP7 type-specific neutralizing monoclonal antibodies. Serotype 1 HRV strains were found to be largely predominant in this period both in Italy and other countries, whereas serotype 4 strains were less common. The number of strains of serotypes 1 and 4 circulating in Europe was equivalent only in 1983-84. Serotype 2 strains…

Microbiology (medical)SerotypeRotavirusReoviridaeEnzyme-Linked Immunosorbent AssayBiologymedicine.disease_causeVirusRotavirus InfectionsMicrobiologyFecesRotavirusHuman rotavirusmedicinePrevalenceHumansTypingSerotypingFecesGeneral Immunology and MicrobiologyInfantGeneral Medicinebiology.organism_classificationVirologyImmunohistochemistryGastroenteritisEuropeMicroscopy ElectronInfectious DiseasesChild PreschoolViral diseaseScandinavian journal of infectious diseases
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Multidrug and broad-spectrum cephalosporin resistance among Salmonella enterica serotype enteritidis clinical isolates in southern Italy.

2002

ABSTRACT From 1992 to 1997, only six sporadic isolates of Salmonella enterica serotype Enteritidis from patients with cases of gastroenteritis in southern Italy exhibited resistance to broad-spectrum cephalosporins. Five isolates produced SHV-12, and one isolate encoded a class C β-lactamase. The bla SHV-12 gene was located in at least two different self-transferable plasmids, one of which also carried a novel class 1 integron.

Microbiology (medical)Serotypemedicine.drug_classEpidemiologySalmonella enteritidisCephalosporinIntegronbeta-LactamasesMicrobiologyPlasmidDrug Resistance Multiple BacterialGenotypemedicineHumansamoxicillin plus clavulanic acid; ampicillin; antibiotic agent; aztreonam; beta lactamase; cefotaxime; cefoxitin; ceftazidime; cephalosporin derivative; chloramphenicol; kanamycin; plasmid DNA; streptomycin; sulfonamide; tobramycin antibiotic resistance; article; bacterial infection; bacterium isolate; DNA probe; gastroenteritis; gastrointestinal infection; Italy; nonhuman; nucleotide sequence; phenotype; plasmid; priority journal; Salmonella; Salmonella enterica Base Sequence; beta-Lactamases; Cephalosporin Resistance; Cross Infection; Drug Resistance Multiple Bacterial; Gastroenteritis; Genes Bacterial; Humans; Italy; Plasmids; Salmonella enteritidis; Salmonella Infections Bacteria (microorganisms); Negibacteria; Salmonella; Salmonella entericaCephalosporin ResistanceCross InfectionbiologyBase SequenceCephalosporin Resistancebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationVirologyGastroenteritisItalySalmonella enteritidisSalmonella entericaGenes BacterialSalmonella Infectionsbiology.proteinPlasmidsJournal of clinical microbiology
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Norovirus GII.4/Sydney/2012 in Italy, Winter 2012–2013

2013

To the Editor: Noroviruses (NoVs) are the major cause of acute gastroenteritis in children and adults; they are responsible for sporadic cases and outbreaks of gastroenteritis in various epidemiologic settings. NoVs can be classified genetically into at least 5 genogroups, GI to GV (1). Although >30 genotypes within genogroups GI, GII, and GIV can infect humans (2), a single genotype, GII.4, has been associated with most NoV-related outbreaks and sporadic cases of gastroenteritis worldwide (3). GII.4 NoV strains continuously undergo genetic/antigenic diversification and periodically generate novel strains through accumulation of punctate mutations or recombination. New GII.4 variants emerge…

Microbiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaLetterGenes ViralGenotypeEpidemiologySequence analysisviruseslcsh:MedicineBiologymedicine.disease_causeNorovirus GII.4 Italylcsh:Infectious and parasitic diseasesDisease Outbreaksfluids and secretionsGenotypemedicinePrevalencevariant Sydney 2012Humanslcsh:RC109-216virusesTypingviruses enteric diseasesLetters to the EditorCaliciviridae InfectionsIncidence (epidemiology)enteric infectionslcsh:RgenogroupsNorovirusvirus diseasesOutbreakVirologyGastroenteritisInfectious DiseasesCaliciviridae InfectionsItalyChild PreschoolNorovirussurveillanceMultilocus sequence typingSeasonsGII.4Multilocus Sequence TypingEmerging Infectious Diseases
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Lineage diversification and recombination in type-4 human astroviruses.

2013

Abstract Human astroviruses (HAstVs) are important enteric pathogens and can be classified genetically and antigenically into eight types. During surveillance of HAstVs in Italy, type-4 HAstVs were detected only sporadically and found to cluster into two distinct genetic groups. Upon sequence analysis of the 3′ end of the polymerase gene (ORF1b) and of the full-length ORF2, the 2008 type-4 HAstV strains were characterised as a novel ORF2 genetic lineage, designated as 4c. The 2008 type-4 HAstVs also shared the ORF1b gene with similar HAstV-4c strains detected globally, thus displaying a conserved ORF1b/ORF2 asset. By interrogation of the databases, this novel lineage 4c accounted for 60.8% …

Microbiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaLineage (genetic)Sequence analysisMolecular Sequence DataSequence alignmentBiologyMicrobiologyAstrovirusFecesOpen Reading FramesAstrovirus Epidemiology Genotyping Italy Viral gastroenteritisPhylogeneticsAstroviridae InfectionsGenetic variationGeneticsHumansAmino Acid SequenceMolecular BiologyGenotypingGeneEcology Evolution Behavior and SystematicsPhylogenyGeneticsRecombination GeneticBase SequenceSequence Homology Amino AcidSequence Analysis RNAvirus diseasesGenetic Variationbiology.organism_classificationRNA-Dependent RNA PolymeraseGastroenteritisInfectious DiseasesRNA ViralCapsid ProteinsSequence AlignmentMamastrovirusInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
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Surveillance of human astrovirus circulation in Italy 2002-2005: emergence of lineage 2c strains.

2010

AbstractBy screening faecal samples collected over four consecutive years (2002-2005) from hospitalized children with diarrhoea in Palermo, Italy, astroviruses (HAstVs) were detected in 3.95% of the patients. The predominant type circulating was HAstV-1 but, in 2002, only HAstV-2 and -4 were identified. Interestingly, the HAstVs-2 detected appeared to be consistently different in 5′ end of their open reading frame 2 from the previously described subtypes. These novel type 2 strains were included in a new 2c lineage based on the phylogenetic analysis and the presence of nine peculiar substitutions.

Microbiology (medical)Settore MED/07 - Microbiologia E Microbiologia ClinicaPathologymedicine.medical_specialtyLineage (genetic)Settore MED/17 - Malattie Infettivesequence analysisSequence analysisMolecular Sequence DataPolymorphism Single NucleotideVirusAstrovirusAstrovirusFecesAstroviridae InfectionsGenotypePrevalenceMedicineHumansTypingChildGenotypingPhylogenyMolecular EpidemiologybiologyPhylogenetic treebusiness.industryGeneral Medicinebiology.organism_classificationVirologyAstrovirus gastroenteritis genotyping Italy sequence analysisInfectious DiseasesgenotypingItalyPopulation SurveillanceRNA ViralbusinessgastroenteritisMamastrovirusClinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases
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