Search results for "Eukaryota"

showing 10 items of 235 documents

Crowdsourced analysis of fungal growth and branching on microfluidic platforms

2021

Fungal hyphal growth and branching are essential traits that allow fungi to spread and proliferate in many environments. This sustained growth is essential for a myriad of applications in health, agriculture, and industry. However, comparisons between different fungi are difficult in the absence of standardized metrics. Here, we used a microfluidic device featuring four different maze patterns to compare the growth velocity and branching frequency of fourteen filamentous fungi. These measurements result from the collective work of several labs in the form of a competition named the “Fungus Olympics.” The competing fungi included five ascomycete species (ten strains total), two basidiomycete…

Aspergillus NidulansHyphal growthMicrofluidicsYeast and Fungal ModelsmikrofluidistiikkaPathology and Laboratory MedicineBranching (linguistics)Microbial PhysiologyMedicine and Health SciencesBiological Phenomenamedia_commonFungal Pathogensmicrofluidic platformsMultidisciplinaryOrganic CompoundsQMonosaccharidesRMicrobial Growth and DevelopmentEukaryotaMicrofluidic Analytical TechniquesChemistryAspergillusAspergillus FumigatusExperimental Organism SystemsFungal MoldsMedical MicrobiologyPhysical SciencesMedicineEngineering and TechnologyCrowdsourcingcrowdsourcingFluidicsPathogenssienetBiological systemResearch ArticlesienirihmastotFungal GrowthFungal growthGeneral Science & TechnologySciencemedia_common.quotation_subjectCarbohydratesHyphaeMycologyBiologyResearch and Analysis Methodsfungal growthkasvuMicrobiologyCompetition (biology)AscomycotaSpecies SpecificitybranchingMicrobial PathogensBasidiomycotaOrganic ChemistryfungiOrganismsChemical CompoundsFungiSustained growthBiology and Life SciencesCollective workYeastGlucosejoukkoistaminenAnimal StudiesLinear growthDevelopmental BiologyFungal hyphaePLOS ONE
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Pharmacological blockade of the fatty acid amide hydrolase (FAAH) alters neural proliferation, apoptosis and gliosis in the rat hippocampus, hypothal…

2015

Endocannabinoids participate in the control of neurogenesis, neural cell death and gliosis. The pharmacological effect of the fatty acid amide hydrolase (FAAH) inhibitor URB597, which limits the endocannabinoid degradation, was investigated in the present study. Cell proliferation (phospho-H3(+) or BrdU(+) cells) of the main adult neurogenic zones as well as apoptosis (cleaved caspase-3(+)), astroglia (GFAP(+)), and microglia (Iba1(+) cells) were analyzed in the hippocampus, hypothalamus and striatum of rats intraperitoneally treated with URB597 (0.3 mg/kg/day) at one dose/4-days resting or 5 doses (1 dose/day). Repeated URB597 treatment increased the plasma levels of the N-acylethanolamine…

AstrocitosNeurobiologia del desenvolupamentAmidohidrolasasCannabinoid receptorCarbamatos:Chemicals and Drugs::Amino Acids Peptides and Proteins::Proteins::Intracellular Signaling Peptides and Proteins::Apoptosis Regulatory Proteins::Caspases [Medical Subject Headings]:Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Differentiation::Neurogenesis [Medical Subject Headings]medicine.medical_treatment:Chemicals and Drugs::Carbohydrates::Monosaccharides::Hexoses::Glucose [Medical Subject Headings]Apoptosis:Phenomena and Processes::Physiological Phenomena::Body Constitution::Body Weights and Measures::Body Size::Body Weight [Medical Subject Headings]chemistry.chemical_compound:Chemicals and Drugs::Amino Acids Peptides and Proteins::Proteins::Membrane Proteins::Receptors Cell Surface::Receptors G-Protein-Coupled::Receptors Cannabinoid::Receptor Cannabinoid CB1 [Medical Subject Headings]0302 clinical medicine:Chemicals and Drugs::Organic Chemicals::Carboxylic Acids::Acids Acyclic::Carbamates [Medical Subject Headings]Fatty acid amide hydrolaseReceptor cannabinoide CB1:Organisms::Eukaryota::Animals [Medical Subject Headings]FAAHGliosishealth care economics and organizations:Chemicals and Drugs::Nucleic Acids Nucleotides and Nucleosides::Nucleosides::Deoxyribonucleosides::Deoxyuridine::Bromodeoxyuridine [Medical Subject Headings]:Chemicals and Drugs::Lipids::Glycerides::Triglycerides [Medical Subject Headings]Original Research0303 health sciencesNeurogenesisBenzamidas:Chemicals and Drugs::Polycyclic Compounds::Steroids::Cholestanes::Cholestenes::Cholesterol [Medical Subject Headings]Endocannabinoid systemEtanolaminas3. Good healthEndocannabinoides:Chemicals and Drugs::Lipids::Fatty Acids::Fatty Acids Unsaturated::Fatty Acids Monounsaturated::Oleic Acids [Medical Subject Headings]CannabinoidesMicroglíalipids (amino acids peptides and proteins)medicine.symptomColesterol:Chemicals and Drugs::Organic Chemicals::Hydrocarbons::Terpenes::Cannabinoids [Medical Subject Headings]:Chemicals and Drugs::Lipids::Fatty Acids::Palmitic Acids [Medical Subject Headings]psychological phenomena and processesProliferación celularmedicine.medical_specialtyCerebroNeurogenesiseducationBiologyBromodesoxiuridina:Anatomy::Nervous System::Neuroglia::Microglia [Medical Subject Headings]Triglicéridoslcsh:RC321-571Ácidos oléicosRatas03 medical and health sciencesCellular and Molecular NeuroscienceInternal medicineHipocampomedicineCaspasa 3:Anatomy::Nervous System::Central Nervous System::Brain::Limbic System::Hippocampus [Medical Subject Headings]:Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Growth Processes::Cell Proliferation [Medical Subject Headings]lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry030304 developmental biologyPalmitoylethanolamide:Chemicals and Drugs::Chemical Actions and Uses::Pharmacologic Actions::Molecular Mechanisms of Pharmacological Action::Neurotransmitter Agents::Endocannabinoids [Medical Subject Headings]:Chemicals and Drugs::Enzymes and Coenzymes::Enzymes::Hydrolases::Amidohydrolases [Medical Subject Headings]Cannabinoids:Anatomy::Cells::Neuroglia::Astrocytes [Medical Subject Headings]Peso corporalEnergy metabolism:Anatomy::Nervous System::Central Nervous System::Brain [Medical Subject Headings]:Anatomy::Nervous System::Central Nervous System::Brain::Limbic System::Hypothalamus [Medical Subject Headings]URB597:Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Death [Medical Subject Headings]:Diseases::Pathological Conditions Signs and Symptoms::Pathologic Processes::Gliosis [Medical Subject Headings]:Chemicals and Drugs::Organic Chemicals::Amines::Amino Alcohols::Ethanolamines [Medical Subject Headings]Muerte celular:Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Death::Apoptosis [Medical Subject Headings]:Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Rodentia::Muridae::Murinae::Rats [Medical Subject Headings]EndocrinologyURB597chemistryGliosisnervous systemGlucosaCannabinoidEnergy Metabolism:Chemicals and Drugs::Organic Chemicals::Amides::Benzamides [Medical Subject Headings]HipotálamoÁcidos palmíticos030217 neurology & neurosurgeryNeuroscienceFrontiers in Cellular Neuroscience
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Validation of a novel automatic deposition of bacteria and yeasts on MALDI target for MALDI-TOF MS-based identification using MALDI Colonyst robot

2017

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) -based identification of bacteria and fungi significantly changed the diagnostic process in clinical microbiology. We describe here a novel technique for bacterial and yeast deposition on MALDI target using an automated workflow resulting in an increase of the microbes' score of MALDI identification. We also provide a comparison of four different sample preparation methods. In the first step of the study, 100 Gram-negative bacteria, 100 Gram-positive bacteria, 20 anaerobic bacteria and 20 yeasts were spotted on the MALDI target using manual deposition, semi-extraction, wet deposition onto 70% formic …

Atmospheric ScienceCarboxylic Acidslcsh:MedicineAnaerobic BacteriaResearch and Analysis MethodsMicrobiologyMass SpectrometryAnalytical ChemistryAutomationSpectrum Analysis TechniquesYeastsEnvironmental Chemistrylcsh:ScienceMatrix-Assisted Laser Desorption Ionization Time-of-Flight Mass SpectrometryGram Negative BacteriaBacteriaOrganic Compoundslcsh:REcology and Environmental SciencesGram Positive BacteriaFormic AcidOrganic ChemistryOrganismsFungiChemical CompoundsBiology and Life SciencesEukaryotaBacteriologyRoboticsYeastChemistryAtmospheric ChemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationPhysical SciencesEarth Scienceslcsh:QAcid DepositionAcidsResearch ArticlePLoS ONE
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Paleoceanography of the Late Cretaceous northwestern Tethys Ocean: Seasonal upwelling or steady thermocline?

2020

In this study we attempted to assess whether seasonal upwelling or a steady thermocline persisted at the western margin of the Tethys Ocean during the late Turonian-early Coniacian interval. For this scope, we employed novel and published stable oxygen isotope (δ18O) data of various organisms (bivalves, bivalves, brachiopods, fish and belemnites). New seasonally resolved temperature estimates were based on the δ18O record of sequentially sampled inoceramid (Inoceramus sp.) and rudist (Hippurites resectus) shells from the Scaglia Rossa and Gosau deposits of northern Italy and western Austria, respectively. Diagenetic screening was performed using reflected light, cathodoluminescence (CL), sc…

Atmospheric ScienceComposite Particles010504 meteorology & atmospheric sciencesMarine and Aquatic SciencesOxygen IsotopesOceanography010502 geochemistry & geophysics01 natural sciencesIsotopesClimatologyCretaceous PeriodMultidisciplinarybiologyPhysicsStable IsotopesQRTemperatureEukaryotaGeologyCretaceousOceanographyPhysical SciencesMedicineMesozoic EraSeasonsPaleotemperatureGeologyResearch ArticleShallow WaterInoceramusBivalvesAtomsWater massScienceOceans and SeasPaleoenvironmentsPaleoceanographyAnimalsPaleoclimatologyParticle PhysicsOcean Temperature0105 earth and related environmental sciencesOrganismsPaleontologyWaterBiology and Life SciencesGeologic TimeMolluscsTethys Oceanbiology.organism_classificationInvertebratesBivalviaWaves and shallow waterEarth SciencesUpwellingHydrologyZoologyThermoclinePLOS ONE
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Tick-borne pathogens in Ixodes ricinus ticks collected from migratory birds in southern Norway

2020

Birds are important hosts for the first life stages of the Ixodes ricinus tick and they can transport their parasites over long distances. The aim of this study was to investigate the prevalence of Borrelia burgdorferi sensu lato, Anaplasma phagocytophilum, Neoehrlichia mikurensis and Rickettsia helvetica in ticks collected from migratory birds in Norway. A total of 815 Ixodes ricinus ticks from 216 birds trapped at Lista Bird Observatory in southern Norway during spring and autumn migration in 2008 were analysed by real-time PCR. B. burgdorferi s. l. was the most prevalent pathogen, detected in 6.1% of the ticks. The prevalence of N. mikurensis, A. phagocytophilum and R. helvetica was 1.2%…

Bacterial Diseases0301 basic medicineLife CyclesSocial SciencesDisease VectorsPathology and Laboratory Medicinemedicine.disease_causePolymerase Chain ReactionTicks0302 clinical medicineMedicine and Health SciencesPrevalencePsychologyRickettsiaFlowering PlantsTick-borne diseaseMultidisciplinaryAnimal BehaviorCoinfectionNorwayQREukaryotaPlantsBacterial PathogensSpringAnaplasmataceaeInfectious DiseasesMedical MicrobiologyTick-Borne DiseasesVertebratesMedicineSeasonsPathogensResearch ArticleAnaplasma phagocytophilumDNA BacterialIxodes ricinusBorrelia BurgdorferiArthropodaScience030106 microbiology030231 tropical medicineZoologyBiologyTickMicrobiologyBirds03 medical and health sciencesBorreliaArachnidaparasitic diseasesmedicineVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470AnimalsBorrelia burgdorferiMicrobial PathogensBehaviorBacteriaIxodesRicinusBird DiseasesBorreliaOrganismsBiology and Life Sciencesbiology.organism_classificationmedicine.diseasebacterial infections and mycosesInvertebratesBorrelia InfectionAnaplasma phagocytophilumNymphsTick InfestationsSpecies InteractionsRickettsia helveticaAmniotesEarth SciencesAnimal MigrationIxodesZoologyDevelopmental Biology
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A new styracosternan hadrosauroid (Dinosauria: Ornithischia) from the Early Cretaceous of Portell, Spain

2021

A new styracosternan ornithopod genus and species is described based on the right dentary of a single specimen from the Mirambell Formation (Early Cretaceous, early Barremian) at the locality of Portell, (Castellón, Spain).Portellsaurus sosbaynatigen. et sp. nov. is diagnosed by two autapomorphic features as well as a unique combination of characters. The autapomorphies include: the absence of a bulge along the ventral margin directly ventral to the base of the coronoid process and the presence of a deep oval cavity on the medial surface of the mandibular adductor fossa below the eleventh-twelfth tooth position. Phylogenetic analyses reveal that the new Iberian form is more closely related …

Bacterial DiseasesAutapomorphyTeethPhysiologyDigestive PhysiologyMandible010502 geochemistry & geophysics01 natural sciencesDinosaursMedical ConditionsornithischiaCariesMedicine and Health SciencesMusculoskeletal SystemdinosaursPhylogenyData ManagementArchosauriaCretaceous PeriodMultidisciplinarybiologyFossilsQREukaryotaPhylogenetic AnalysisGeologyPrehistoric AnimalsBiodiversityBiological EvolutionCretaceousPhylogeneticsInfectious DiseasesOuranosaurusMesozoic EraMedicineAnatomyOrnithischiaCretaceous periodOrnithischiaResearch ArticleComputer and Information Sciences010506 paleontologyScienceVertebrate PaleontologyMantellisaurusdentitionPaleontologySymphysesAnimalsDentitionEvolutionary SystematicsPaleozoologyTaxonomy0105 earth and related environmental sciencesteethEvolutionary Biologyphylogenetic analysisOrganismsBiology and Life SciencesPaleontologyGeologic TimeBariliumsymphysesbiology.organism_classificationJawSpainEarth SciencesIguanodonPaleobiologyDigestive SystemHeadZoologyOrnithopod
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Importance of Propionibacterium acnes hemolytic activity in human intervertebral discs: A microbiological study

2018

Most patients with chronic lower back pain (CLBP) exhibit degenerative disc disease. Disc specimens obtained during initial therapeutic discectomies are often infected/colonized with Propionibacterium acnes, a Gram-positive commensal of the human skin. Although pain associated with infection is typically ascribed to the body's inflammatory response, the Gram-positive bacterium Staphylococcus aureus was recently observed to directly activate nociceptors by secreting pore-forming α-hemolysins that disrupt neuronal cell membranes. The hemolytic activity of P. acnes in cultured disc specimens obtained during routine therapeutic discectomies was assessed through incubation on sheep-blood agar. T…

Bacterial DiseasesSensory ReceptorsPhysiologyStaphylococcusCellSocial SciencesHuman skinmedicine.disease_causePathology and Laboratory MedicineToxicologyMass SpectrometryAnalytical ChemistryPathogenesis0302 clinical medicineSpectrum Analysis TechniquesINFECTIONMedicine and Health SciencesNERVEAgarToxinsPsychologyStaphylococcus AureusIntervertebral DiscPOPULATIONMammals030222 orthopedicsMultidisciplinarybiologyQSTAPHYLOCOCCUSREukaryotaNociceptorsASSOCIATIONMatrix-Assisted Laser Desorption Ionization Mass SpectrometryRuminantsPREVALENCE3. Good healthBody FluidsBacterial PathogensChemistrymedicine.anatomical_structureBloodInfectious DiseasesStaphylococcus aureusMedical MicrobiologyPhysical SciencesVertebratesMedicineSensory PerceptionAnatomyPathogensLOW-BACK-PAINResearch ArticleSignal Transductionfood.ingredientScienceLower Back PainToxic AgentsPainResearch and Analysis MethodsMicrobiologyHemolysisDegenerative disc diseaseMicrobiology03 medical and health sciencesPropionibacterium acnesfoodSigns and SymptomsDiagnostic MedicinemedicineAnimalsHumansPropionibacterium acnesMicrobial PathogensStaphylococcal InfectionGram-Positive Bacterial InfectionsINNERVATIONSheepBacteriabusiness.industryOrganismsBiology and Life SciencesCell Biologymedicine.diseasebiology.organism_classificationAmniotesChronic DiseasebusinessLow Back Pain030217 neurology & neurosurgeryBacteriaNeurosciencePLoS ONE
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Dental disease and dietary isotopes of individuals from St Gertrude Church cemetery, Riga, Latvia.

2018

This research explores oral health indicators and stable carbon and nitrogen isotope data to explore diet, and differences in diet, between people buried in the four different contexts of the St Gertrude Church cemetery (15th– 17th centuries AD): the general cemetery, two mass graves, and a collective mass burial pit within the general cemetery. The main aim is to assess whether people buried in the mass graves were rural immigrants, or if they were more likely to be the victims of plague (or another epidemic) who lived in Riga and its suburbs. The data produced (from dental disease assessments and isotope analyses) were compared within, as well as between, the contexts. Most differences em…

Bacterial DiseasesTeethPhysiologyImmigrationDigestive PhysiologyPrevalencelcsh:MedicineMarine and Aquatic SciencesOral DiseasesCariesMedicine and Health Sciences0601 history and archaeologyCemeteriesMarine Fishlcsh:Sciencemedia_commonCarbon IsotopesMultidisciplinaryCalculus060102 archaeologyStomatognathic DiseasesMarine fishEukaryota06 humanities and the artsGeographyInfectious DiseasesPhysical SciencesVertebratesAnatomyResearch Articlemedia_common.quotation_subjectOral MedicineMarine BiologyOral healthPlague (disease)Research and Analysis MethodsOral and maxillofacial pathologymedicineHumansAnimalsDentitionChemical CharacterizationPeriodontal DiseasesNutritionIsotope Analysis060101 anthropologyNitrogen Isotopeslcsh:ROrganismsBiology and Life Sciencesmedicine.diseaseLatviaDietFishJawEarth Scienceslcsh:QRural areaDigestive SystemHeadMathematicsDemographyPloS one
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Complementary methods assessing short and long-term prey of a marine top predator ‒ Application to the grey seal-fishery conflict in the Baltic Sea.

2019

The growing grey seal (Halichoerus grypus) population in the Baltic Sea has created conflicts with local fisheries, comparable to similar emerging problems worldwide. Adequate information on the foraging habits is a requirement for responsible management of the seal population. We investigated the applicability of available dietary assessment methods by comparing morphological analysis and DNA metabarcoding of gut contents (short-term diet; n = 129/125 seals, respectively), and tissue chemical markers i.e. fatty acid (FA) profiles of blubber and stable isotopes (SIs) of liver and muscle (mid- or long-term diet; n = 108 seals for the FA and SI markers). The methods provided complementary inf…

Baltic StatespredatorsMolecular biologyTroutSeals EarlessMarine and Aquatic SciencesPredationSocial Sciencespredator populationMolecular biology assays and analysis techniquesFATTY-ACID-COMPOSITIONDIET COMPOSITIONPsychologyForagingpetokannatMammalssaaliseläimetSealsEcologyAnimal BehaviorNucleic acid analysisDatabase and informatics methodsFatty AcidsQSequence analysisREukaryotaTrophic InteractionsCommunity EcologyOsteichthyesVertebrates1181 Ecology evolutionary biologyMedicinepreyHALICHOERUS-GRYPUSDNA analysisFOOD-WEBResearch Articlegrey sealBioinformaticsECOLOGICAL REGIME SHIFTSScienceFisheriesMarine BiologyPHOCA-HISPIDA-BOTNICAfisherypetoeläimetGeneticsAnimalsGenetikMarine MammalsDNA sequence analysisEcosystemRINGED SEALSEkologiBehaviorSTABLE-ISOTOPE ANALYSISDNA-analyysiBLUBBEREcology and Environmental SciencesOrganismsBiology and Life SciencesCARBON ISOTOPESResearch and analysis methodskalatalousMolecular biology techniquesFishAmniotesEarth Sciences1182 Biochemistry cell and molecular biologyhalli (hylkeet)ZoologyPLoS ONE
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Temperature-induced microstructural changes in shells of laboratory-grown Arctica islandica (Bivalvia).

2021

Bivalve shells are increasingly used as archives for high-resolution paleoclimate analyses. However, there is still an urgent need for quantitative temperature proxies that work without knowledge of the water chemistry–as is required for δ18O-based paleothermometry–and can better withstand diagenetic overprint. Recently, microstructural properties have been identified as a potential candidate fulfilling these requirements. So far, only few different microstructure categories (nacreous, prismatic and crossed-lamellar) of some short-lived species have been studied in detail, and in all such studies, the size and/or shape of individual biomineral units was found to increase with water temperat…

BiomineralizationAtmospheric Science010504 meteorology & atmospheric sciencesPhysiologyScanning electron microscopeArctica islandica010502 geochemistry & geophysicsBiochemistry01 natural sciencesMachine LearningMaterials PhysicsPhase (matter)Image Processing Computer-AssistedElectron MicroscopyMicrostructureClimatologyMicroscopyMultidisciplinaryAgricultural and Biological Sciences(all)biologyPhysicsQTemperatureREukaryotaSoftware EngineeringMicrostructureAdaptation PhysiologicalDiagenesisPhysical SciencesEngineering and TechnologyMedicineScanning Electron MicroscopyPaleotemperaturePorosityResearch ArticleBivalvesComputer and Information SciencesMaterials scienceBaltic SeaImaging TechniquesScienceMaterials ScienceShell (structure)MineralogyResearch and Analysis MethodsComputer SoftwareAnimal ShellsBodies of waterAnimalsPaleoclimatologyGeneralArctica islandica0105 earth and related environmental sciencesBiochemistry Genetics and Molecular Biology(all)MorphometryOrganismsPaleontologyWaterBiology and Life SciencesMolluscsbiology.organism_classificationBivalviaInvertebratesBivalviaMarine and aquatic sciencesEarth sciencesMicroscopy Electron ScanningLaboratoriesPhysiological ProcessesZoologySoftwareGenetics and Molecular Biology(all)BiomineralizationPLoS ONE
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