Search results for "Europe"

showing 10 items of 6186 documents

Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Identifying small pelagic Mediterranean fish schools from acoustic and environmental data using optimized artificial neural networks

2019

Abstract The Common Fisheries Policy of the European Union aims to exploit fish stocks at a level of Maximum Sustainable Yield by 2020 at the latest. At the Mediterranean level, the General Fisheries Commission for the Mediterranean (GFCM) has highlighted the importance of reversing the observed declining trend of fish stocks. In this complex context, it is important to obtain reliable biomass estimates to support scientifically sound advice for sustainable management of marine resources. This paper presents a machine learning methodology for the classification of pelagic species schools from acoustic and environmental data. In particular, the methodology was tuned for the recognition of an…

0106 biological sciencesMarine conservationMaximum sustainable yieldFish stockFish school010603 evolutionary biology01 natural sciencesAcoustic surveyEnvironmental dataAnchovymedia_common.cataloged_instanceEuropean unionEcology Evolution Behavior and Systematicsmedia_commonEcologybiologySettore INF/01 - Informaticabusiness.industry010604 marine biology & hydrobiologyApplied MathematicsEcological ModelingEnvironmental resource managementPelagic zonebiology.organism_classificationClassificationComputer Science ApplicationsGeographyComputational Theory and MathematicsFishing industryModeling and SimulationbusinessNeural networks
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Morphology, geographical variation and the subspecies of Marsh TitPoecile palustrisin Britain and central Europe

2016

Capsule: All British Marsh Tits belong to subspecies Poecile palustris dresseri, being smaller than nominate P. p. palustris of central Europe. Aims: Determining the subspecies of Marsh Tit in Britain to test whether ssp. P. p. palustris occurs in northern England and Scotland, by assessing regional variation in size compared with central European birds. Methods: 1147 wing length and 250 tail length measurements from 953 Marsh Tits were compared between eight British locations to test for regional variation. Biometrics were compared between birds from Britain and six locations within the continental European range of ssp. palustris. Results: There was no regional variation in wing or tail l…

0106 biological sciencesMarshRange (biology)biometrySubspeciesAge and sex010603 evolutionary biology01 natural sciencesPoecile palustris010605 ornithologytailsex determination analysisPoecile palustrisEcology Evolution Behavior and SystematicsNature and Landscape Conservationgeographygeography.geographical_feature_categorybiologyEcologygeographical variationbiology.organism_classificationVariation (linguistics)EnglandScotlandRegional variationbirdsCentral European regionZoologyBird Study
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Synthetic cartography for mapping biodiversity in the Mediterranean region: Sicily as a case study

2018

This paper proposes a new hierarchical land classification system for the mapping of species distribution at national or regional scales. Our integrative framework incorporates two hierarchical levels inferred from historical, climatic, geomorphological and geological attributes. The feasibility of this proposal is based on the use of historical collections and literature data, as well as on its ability to combine old low-precision data with more recent records of higher resolution. The system is set up for vascular plants, but it can also be used for other taxonomic groups. Furthermore, it has the potential for application to the whole Mediterranean region because it is based on informatio…

0106 biological sciencesMediterranean climateCartographyGeographic information systemConservation Biologyspatial analysisSpecies distributionBiodiversity & Conservationdata analysisBiodiversityDistribution (economics)Plant Science010603 evolutionary biology01 natural sciencesRemote Sensing and GISFloristics & DistributionPlant sciencelcsh:BotanydistributionTaxonomic rankEcology Evolution Behavior and Systematicsbiological collectionsbusiness.industryplantsSouthern Europe and MediterraneanData analysiPlantSpecies InventoriesEcology Evolution Behavior and Systematiclcsh:QK1-989GIS softwareGeographyAngiospermaeBiogeographySpatial analysiBiological collectionbusinessCartography010606 plant biology & botanyResearch ArticlePhytoKeys
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Seascape connectivity of European anchovy in the Central Mediterranean Sea revealed by weighted Lagrangian backtracking and bio-energetic modelling

2020

AbstractEcological connectivity is one of the most important processes that shape marine populations and ecosystems, determining their distribution, persistence, and productivity. Here we use the synergy of Lagrangian back-trajectories, otolith-derived ages of larvae, and satellite-based chlorophyll-a to identify spawning areas of European anchovy from ichthyoplanktonic data, collected in the Strait of Sicily (Central Mediterranean Sea), i.e., the crucial channel in between the European and African continents. We obtain new evidence of ecosystem connectivity between North Africa and recruitment regions off the southern European coasts. We assess this result by using bio-energetic modeling, …

0106 biological sciencesMediterranean climateMarine conservationSettore BIO/07 - Ecologia010504 meteorology & atmospheric sciencesClimateEcological connectivityPopulation DynamicsFisherieslcsh:MedicineDistribution (economics)Environment01 natural sciencesModels BiologicalArticleMediterranean seaLagrangian back-trajectoriesEuropean anchovyMediterranean SeaAnimalsEuropean anchovyEcosystemlcsh:ScienceEcosystem0105 earth and related environmental sciencesSeascapeMultidisciplinarygeography.geographical_feature_categorybiologybusiness.industryPhysical oceanography010604 marine biology & hydrobiologylcsh:RFishesbiology.organism_classificationFisheryStrait of SicilyGeographyLarvalcsh:QbusinessChannel (geography)
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Circummed pine forest database: An electronic archive for mediterranean and submediterranean pine forest vegetation data

2019

Large thematic databases of vegetation plots are increasingly needed for vegetation studies and biodiversity research. In this paper, we present the CircumMed Pine Forest Database (GIVD ID: EU-00-026), which in November 2018, comprised records from 6317 pine-dominated vegetation plots (relevés) and associated vegetation types from 20 countries of the Mediterranean Basin, Near East and Crimea. These vegetation plots were collected through a detailed literature search for plots not previously included in the European Vegetation Archive (EVA), in order to fill geographic gaps in data coverage. The database comprises Mediterranean (including Oromediterranean) pine-forest vegetation plots from b…

0106 biological sciencesMediterranean climateVegetation classificationBos- en LandschapsecologieBiodiversityPlant Sciencecomputer.software_genre01 natural sciencesMediterranean BasinTurbovegRelevémedicineForest and Landscape EcologyMacroecologyPinuVegetatieCircumMed Pine Forest Database • European Vegetation Archive (EVA) • forest vegetation • Mediterranean Basin • phytosociology • pine forest • Pinus • relevé • Turboveg • vegetation plotVegetationDatabasePhytosociology15. Life on landPinusVegetation plotGeographyThematic mapCircumMed Pine Forest Database; European Vegetation Archive (EVA); Forest vegetation; Mediterranean Basin; Phytosociology; Pine forest; Pinus; Relevé; Turboveg; Vegetation plotPine forestForest vegetationMediterranean BasinVegetatie Bos- en LandschapsecologieVegetation Forest and Landscape Ecologymedicine.symptomCircumMed Pine Forest DatabaseVegetation (pathology)computer010606 plant biology & botanyEuropean Vegetation Archive (EVA)Phytosociology
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Reappraisal of ‘chronospecies' and the use of Arvicola (Rodentia, Mammalia) for biochronology.

2008

13 pages; International audience; The water vole, genus Arvicola, is characterised by a broad geographic distribution throughout Europe and is widespread during the late Middle and Upper Pleistocene. This genus is used as a major biostratigraphic tool within the Quaternary. Specific determinations using the Schmelzband-Differenzierung-Quotient or SDQ have identified many chronospecies within the fossil species Arvicola cantiana (Hinton, 1910). As SDQ calculation remains limited, this study reappraises the Arvicola genus in terms of morphodiversity and morphospace using outline analysis which takes into account the tooth as a whole. Outline analysis suggests that one single species of Arvico…

0106 biological sciencesMorphology010506 paleontologyArcheologypaléontologie des vertébrés[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryPopulationRodentiaBiochronologyPléistocène moyen010603 evolutionary biology01 natural sciencesEnamel quotientTheriaPaleontologyEutheriaGenusBiochronologyChronospeciesArvicolaWater voleeducation[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0105 earth and related environmental scienceseducation.field_of_studychronologiebiologyOutline analysisrongeurbiostratigraphiePléistocène supérieurbiology.organism_classificationEuropeGeography[ SHS.ARCHEO ] Humanities and Social Sciences/Archaeology and PrehistoryArvicolamicromammifère[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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A multivariate morphometric analysis of diagnostic traits in southern Italy and Sicily pubescent oaks

2020

AbstractSpecies identification within the species complex ofQ. pubescensis a well-known taxonomic challenge among European botanists. Some of the specific pubescent oak binomials currently accepted in various European floras and checklists were originally described in Sicily and southern Calabria. As a consequence, several species belonging to the pubescent oaks group (Q. pubescens,Q. amplifolia,Q. congesta,Q. dalechampii,Q. leptobalanaandQ. virgiliana) are reported in the taxonomic and phytosociological literature. To verify whether it was possible to associate a diverse set of morphological characters with each of these different taxa, thirteen natural populations of pubescent oak from Si…

0106 biological sciencesMultivariate statisticsSpecies complexdiagnostic morphological charactersdiagnostic morphological characters; nomenclature; quercus; southern Europe; taxonomyPaleontologyZoologyPlant ScienceBiology010603 evolutionary biology01 natural sciencesPlant ecologysouthern EuropetaxonomyTaxonDiagnostic morphological characters Nomenclature Quercus Southern Europe TaxonomyBotánicaTaxonomy (biology)Identification (biology)nomenclaturequercusNomenclature010606 plant biology & botany
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A minimalist macroparasite diversity in the round goby of the Upper Rhine reduced to an exotic acanthocephalan lineage.

2018

AbstractThe round goby, Neogobius melanostomus, is a Ponto-Caspian fish considered as an invasive species in a wide range of aquatic ecosystems. To understand the role that parasites may play in its successful invasion across Western Europe, we investigated the parasitic diversity of the round goby along its invasion corridor, from the Danube to the Upper Rhine rivers, using data from literature and a molecular barcoding approach, respectively. Among 1666 parasites extracted from 179 gobies of the Upper Rhine, all of the 248 parasites barcoded on the c oxidase subunit I gene were identified as Pomphorhynchus laevis. This lack of macroparasite diversity was interpreted as a loss of parasites…

0106 biological sciencesNeogobiusRange (biology)Lineage (evolution)Zoology010603 evolutionary biology01 natural sciencesNucleotide diversityAcanthocephalaPomphorhynchus laevisinvasive speciesElectron Transport Complex IVNeogobius melanostomusRhine–Main–Danube corridorRiversAnimalsDNA Barcoding Taxonomic[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology14. Life underwaterEurope EasternPhylogenyGenetic diversitybiology010604 marine biology & hydrobiologyGenetic VariationHigh-Throughput Nucleotide SequencingBiodiversitybiology.organism_classificationPerciformesInfectious DiseasesHaplotypesRound gobyMacroparasiteAnimal Science and ZoologyParasitologyPomphorhynchus laevisFranceHelminthiasis AnimalIntroduced SpeciesExotic parasite
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A miniature world in decline. European Red List of Mosses, Liverworts and Hornworts

2019

AimThis Red List is a summary of the conservation status of the European species of mosses, liverworts and hornworts, collectively known as bryophytes, evaluated according to IUCN’s Guidelines for Application of IUCN Red List Criteria at Regional Level. It provides the first comprehensive, region-wide assessment of bryophytes and it identifies those species that are threatened with extinction at a European level, so that appropriate policy measures and conservation actions, based on the best available evidence, can be taken to improve their status.ScopeAll bryophytes native to or naturalised in Europe (a total of 1,817 species), have been included in this Red List. In Europe, 1,796 species …

0106 biological sciencesNot evaluatedData deficientNear-threatened speciesEcologyBiodiversity15. Life on landthreatened bryophytes species IUCN Europe010603 evolutionary biology01 natural sciencesGeography13. Climate actionThreatened speciesIUCN Red ListConservation statusBryophyte14. Life underwater010606 plant biology & botany
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