Search results for "Evolutionary Processes"

showing 10 items of 36 documents

No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: From mating interactions to differential gene ex…

2021

Species usually develop reproductive isolation mechanisms allowing them to avoid interbreeding. These preventive barriers can act before reproduction, “pre-zygotic barriers”, or after reproduction, “post-zygotic barriers”. Pre-zygotic barriers prevent unfavourable mating, while post-zygotic barriers determine the viability and selective success of the hybrid offspring. Hybridization in parasites and the underlying reproductive isolation mechanisms maintaining their genetic integrity have been overlooked. Using an integrated approach this work aims to quantify the relative importance of pre-zygotic barriers in Schistosoma haematobium x S. bovis crosses. These two co-endemic species cause sch…

0301 basic medicineMaleIntrogressionRC955-962Gene ExpressionBiochemistryTransmembrane Transport Proteins0302 clinical medicineMedical ConditionsCricetinaeArctic medicine. Tropical medicineMedicine and Health SciencesMatingSchistosoma haematobiumGeneticsMammalsbiologyMosaicism[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]ReproductionEukaryotaReproductive isolationGenomicsInfectious DiseasesMate choiceVertebratesHamstersSchistosomaFemalePublic aspects of medicineRA1-1270Transcriptome AnalysisResearch ArticleEvolutionary ProcessesReproductive IsolationGenetic Speciation030231 tropical medicineIntrogressionRodents03 medical and health sciencesHelminthsGeneticsParasitic DiseasesAnimalsGeneSchistosomaEvolutionary BiologyHost (biology)Public Health Environmental and Occupational HealthOrganismsBiology and Life SciencesComputational BiologyProteinsbiology.organism_classificationGenome AnalysisInvertebratesSchistosoma Haematobium030104 developmental biologyGene Expression RegulationAmniotesZoologyPLoS Neglected Tropical Diseases
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Intermittent targeted therapies and stochastic evolution in patients affected by chronic myeloid leukemia

2016

Front line therapy for the treatment of patients affected by chronic myeloid leukemia (CML) is based on the administration of tyrosine kinase inhibitors, namely imatinib or, more recently, axitinib. Although imatinib is highly effective and represents an example of a successful molecular targeted therapy, the appearance of resistance is observed in a proportion of patients, especially those in advanced stages. In this work, we investigate the appearance of resistance in patients affected by CML, by modeling the evolutionary dynamics of cancerous cell populations in a simulated patient treated by an intermittent targeted therapy. We simulate, with the Monte Carlo method, the stochastic evolu…

0301 basic medicineOncologyDrugStatistics and Probabilitymedicine.medical_specialtymedicine.medical_treatmentmedia_common.quotation_subjectTargeted therapy03 medical and health sciencesClassical Monte Carlo simulations; computational biology; models for evolution (theory); mutational and evolutionary processes (theory); Statistical and Nonlinear Physics; Statistics and Probability; Statistics Probability and Uncertainty0302 clinical medicinecomputational biologyInternal medicinemedicineClassical Monte Carlo simulationmutational and evolutionary processes (theory)media_commonbusiness.industryMyeloid leukemiaStatistical and Nonlinear PhysicsImatinibSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Axitinib030104 developmental biology030220 oncology & carcinogenesisCancer cellToxicityStatistics Probability and Uncertaintybusinessmodels for evolution (theory)Tyrosine kinasemedicine.drugStatistical and Nonlinear Physic
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Experimental virus evolution reveals a role of plant microtubule dynamics and TORTIFOLIA1/SPIRAL2 in RNA trafficking.

2014

1 tabla y 2 figuras

ArabidopsisPlant ScienceMicrotubulesRNA Transport//purl.org/becyt/ford/1 [https]INFECTIONTobacco mosaic virusTOBACCO-MOSAIC-VIRUSMovement proteinCytoskeletonCytoskeletonGeneticsCoat proteinMultidisciplinaryTRANSGENIC PLANTSQREXPERIMENTAL EVOLUTIONARABIDOPSISBiological Evolution3. Good healthCell biologyMacromolecular assemblyTobacco Mosaic VirusMICROTUBULESMedical MicrobiologyTobamovirusesViral Pathogensdynamic plasticityHost-Pathogen InteractionsMedicineTobacco mosaic viruscortical microtubuleCellular Structures and OrganellesCortical microtubuleARABIDOPSIS CORTICAL MICROTUBULESCell wallsMicrotubule-Associated ProteinsCIENCIAS NATURALES Y EXACTASResearch ArticleEvolutionary ProcessesSciencePlant Cell BiologyPlant PathogensORGANIZATIONBiologyMicrobiologyPlant Viral PathogensCiencias BiológicasMOVEMENT PROTEINComplexesMicrotubuleEvolutionary Adaptation//purl.org/becyt/ford/1.6 [https]Microbial PathogensPlant DiseasesEvolutionary BiologyArabidopsis ProteinsBotánicaRNABiology and Life SciencesCell BiologyPlant PathologyTMVCytoplasmMutationRNAVirologíaHELICAL GROWTHPloS one
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Experimental evolution of an oncolytic vesicular stomatitis virus with increased selectivity for p53-deficient cells

2014

Experimental evolution has been used for various biotechnological applications including protein and microbial cell engineering, but less commonly in the field of oncolytic virotherapy. Here, we sought to adapt a rapidly evolving RNA virus to cells deficient for the tumor suppressor gene p53, a hallmark of cancer cells. To achieve this goal, we established four independent evolution lines of the vesicular stomatitis virus (VSV) in p53-knockout mouse embryonic fibroblasts (p53-/- MEFs) under conditions favoring the action of natural selection. We found that some evolved viruses showed increased fitness and cytotoxicity in p53-/- cells but not in isogenic p53+/+ cells, indicating gene-specifi…

Cancer TreatmentVirus OncolíticosProtein EngineeringMiceMedicine and Health SciencesMacromolecular EngineeringMice KnockoutOncolytic VirotherapyMultidisciplinaryQProteína p53 Supresora de TumorRNeoplasias de la Mama3. Good healthOncolytic VirusesOncologyVesicular stomatitis virusColonic NeoplasmsMedicineFemaleVesicular StomatitisResearch ArticleBiotechnologyDirected EvolutionEvolutionary ProcessesTumor suppressor geneScienceBioengineeringBreast NeoplasmsBiologyMicrobiologyViral EvolutionVirusVesicular StomatitisVirologyCell Line TumorGeneticsAnimalsHumansEvolutionary BiologyNeoplasias del ColonBiology and Life SciencesRNA virusVesiculovirusbiology.organism_classificationVirologyOrganismal EvolutionOncolytic virusAnimal Models of InfectionArtificial SelectionSynthetic BioengineeringViruses and CancerCell cultureMicrobial EvolutionCancer cellCancer researchDirected Molecular EvolutionTumor Suppressor Protein p53
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Coincidental loss of bacterial virulence in multi-enemy microbial communities.

2014

The coincidental virulence evolution hypothesis suggests that outside-host selection, such as predation, parasitism and resource competition can indirectly affect the virulence of environmentally-growing bacterial pathogens. While there are some examples of coincidental environmental selection for virulence, it is also possible that the resource acquisition and enemy defence is selecting against it. To test these ideas we conducted an evolutionary experiment by exposing the opportunistic pathogen bacterium Serratia marcescens to the particle-feeding ciliate Tetrahymena thermophila, the surfacefeeding amoeba Acanthamoeba castellanii, and the lytic bacteriophage Semad11, in all possible combi…

Ecological selectionBacteriophageNatural SelectionBacteriophagesANTAGONISTIC COEVOLUTIONLISTERIA-MONOCYTOGENESSerratia marcescens1183 Plant biology microbiology virologyGeneticsSERRATIA-MARCESCENSAcanthamoeba castellanii0303 health sciencesMultidisciplinaryEcologybiologyQTetrahymenaRAcanthamoeba castellaniiMedicineResearch ArticleEvolutionary ProcessesVirulence FactorsAntagonistic CoevolutionScienceMicrobial ConsortiaeducationVirulenceMicrobiologyMicrobial EcologyMicrobiologyEvolution Molecular03 medical and health sciencesmulti-enemy microbial communitiesWater environment030304 developmental biologySTAPHYLOCOCCUS-AUREUSEvolutionary BiologyPSEUDOMONAS-AERUGINOSA VIRULENCE030306 microbiologybacterial virulenceDICTYOSTELIUM-DISCOIDEUMBiology and Life SciencesBacteriologybiology.organism_classificationOrganismal EvolutionArtificial SelectionTETRAHYMENA-THERMOPHILAEvolutionary EcologyMicrobial Evolutionta1181AMEBA ACANTHAMOEBA-CASTELLANIILEGIONELLA-PNEUMOPHILABacteriaMEDIA COMPOSITION INFLUENCESPLoS ONE
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The evolutionary history of the rediscovered Austrian population of the giant centipede Scolopendra cingulata Latreille 1829 (Chilopoda, Scolopendrom…

2014

The thermophilous giant centipede Scolopendra cingulata is a voracious terrestrial predator, which uses its modified first leg pair and potent venom to capture prey. The highly variable species is the most common of the genus in Europe, occurring from Portugal in the west to Iran in the east. The northernmost occurrences are in Hungary and Romania, where it abides in small isolated fringe populations. We report the rediscovery of an isolated Austrian population of Scolopendra cingulata with the first explicit specimen records for more than 80 years and provide insights into the evolutionary history of the northernmost populations utilizing fragments of two mitochondrial genes, COI and 16S, …

Evolutionary GeneticsEvolutionary ProcessesRange (biology)Animal EvolutionPopulationMolecular Sequence DataPopulation geneticsZoologylcsh:MedicineBiologyCingulataGenusAnimalseducationlcsh:ScienceScolopendra cingulataArthropodseducation.field_of_studyEvolutionary BiologyMultidisciplinaryPopulation BiologyFossilsScolopendralcsh:RBiology and Life SciencesAustria ; Hungary ; Europe ; Phylogenetic evolution ; Sequence alignment ; Evolutionary genetics ; Islands ; Population geneticsbiology.organism_classificationBiological EvolutionOrganismal EvolutionPhylogeographyBiogeographylcsh:QCentipedeZoologyPopulation GeneticsResearch ArticlePLoS ONE
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Genetic and Ecotypic Differentiation in a Californian Plant Polyploid Complex (Grindelia, Asteraceae)

2014

Studies of ecotypic differentiation in the California Floristic Province have contributed greatly to plant evolutionary biology since the pioneering work of Clausen, Keck, and Hiesey. The extent of gene flow and genetic differentiation across interfertile ecotypes that span major habitats in the California Floristic Province is understudied, however, and is important for understanding the prospects for local adaptation to evolve or persist in the face of potential gene flow across populations in different ecological settings. We used microsatellite data to examine local differentiation in one of these lineages, the Pacific Coast polyploid complex of the plant genus Grindelia (Asteraceae). W…

Evolutionary GeneticsMarshPlant EvolutionSpeciationlcsh:MedicinePlant ScienceCaliforniaGene flowPloidyMolecular SystematicsNatural Selectionlcsh:ScienceFlowering Plantseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryGeographyEcotypeEcologyfood and beveragesPolyploid complexPlantsBiological EvolutionHabitatResearch ArticleGene FlowEvolutionary ProcessesGrindeliaGenotypeGeneral Science & TechnologyPopulationParallel EvolutionBiologyPolyploidyGrindeliaEvolutionary Adaptationparasitic diseasesGeneticsEvolutionary SystematicseducationHybridizationTaxonomyLocal adaptationEcotypeEvolutionary BiologygeographyPopulation Biologylcsh:ROrganismsBiology and Life SciencesGeobotanyPlant Taxonomybiology.organism_classificationOrganismal EvolutionGenetic Locilcsh:QPopulation GeneticsMicrosatellite RepeatsPLoS ONE
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On the complexity of the Saccharomyces bayanus taxon: Hybridization and potential hybrid speciation

2014

Although the genus Saccharomyces has been thoroughly studied, some species in the genus has not yet been accurately resolved; an example is S. bayanus, a taxon that includes genetically diverse lineages of pure and hybrid strains. This diversity makes the assignation and classification of strains belonging to this species unclear and controversial. They have been subdivided by some authors into two varieties (bayanus and uvarum), which have been raised to the species level by others. In this work, we evaluate the complexity of 46 different strains included in the S. bayanus taxon by means of PCR-RFLP analysis and by sequencing of 34 gene regions and one mitochondrial gene. Using the sequenc…

Evolutionary GeneticsSaccharomyces bayanusDIVERSITYSequence Homologylcsh:MedicineSaccharomycesPolymerase Chain Reaction//purl.org/becyt/ford/1 [https]Genética y HerenciaPCR-RFLP analysisFungal EvolutionCluster Analysislcsh:ScienceGenome EvolutionPhylogenyGeneticsMultidisciplinarySACCHAROMYCES EUBAYANUSPhylogenetic analysisbiologyStrain (biology)Systems BiologyGenomicsS. bayanusPolymorphism Restriction Fragment LengthCIENCIAS NATURALES Y EXACTASResearch ArticleEvolutionary ProcessesGenetic SpeciationMolecular Sequence DataIntrogressionMycologyGenome ComplexityMicrobiologyGenètica molecularCiencias BiológicasSaccharomycesSpecies SpecificityPhylogeneticsGenetic variationGeneticsYEAST//purl.org/becyt/ford/1.6 [https]HybridizationAllelesHybridEvolutionary BiologyBase Sequencelcsh:ROrganismsFungiBiology and Life SciencesComputational BiologyGenetic VariationSACCHAROMYCES PASTORIANUSSequence Analysis DNAComparative Genomicsbiology.organism_classificationYeastGenetics PopulationHaplotypesFungal ClassificationHybridization GeneticHybrid speciationlcsh:Q
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Reconstruction of the evolutionary history of Saccharomyces cerevisiae x S. kudriavzevii hybrids based on multilocus sequence analysis.

2012

In recent years, interspecific hybridization and introgression are increasingly recognized as significant events in the evolution of Saccharomyces yeasts. These mechanisms have probably been involved in the origin of novel yeast genotypes and phenotypes, which in due course were to colonize and predominate in the new fermentative environments created by human manipulation. The particular conditions in which hybrids arose are still unknown, as well as the number of possible hybridization events that generated the whole set of natural hybrids described in the literature during recent years. In this study, we could infer at least six different hybridization events that originated a set of 26 S…

Evolutionary Geneticslcsh:MedicineYeast and Fungal ModelsWineSaccharomycesGenomeSouth AfricaNatural SelectionFungal EvolutionDNA FungalMycological Typing Techniqueslcsh:ScienceGenome EvolutionPhylogenyRecombination GeneticGeneticsMultidisciplinarybiologyfood and beveragesGenomicsBiological EvolutionEuropePhylogeographyPloidyResearch ArticleGenome evolutionEvolutionary ProcessesGenotypeGenes FungalIntrogressionGenomicsMycologySaccharomyces cerevisiaeMicrobiologySaccharomycesModel OrganismsPhylogeneticsGeneticsHumansAdaptationBiologyHybridizationHybridEvolutionary BiologyPloidiesChimeralcsh:RComparative GenomicsSouth Americabiology.organism_classificationYeastGenetic Polymorphismlcsh:QPopulation GeneticsMultilocus Sequence TypingPLoS ONE
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Deep-Time Phylogenetic Clustering of Extinctions in an Evolutionarily Dynamic Clade (Early Jurassic Ammonites)

2012

7 pages; International audience; Conservation biologists and palaeontologists are increasingly investigating the phylogenetic distribution of extinctions and its evolutionary consequences. However, the dearth of palaeontological studies on that subject and the lack of methodological consensus hamper our understanding of that major evolutionary phenomenon. Here we address this issue by (i) reviewing the approaches used to quantify the phylogenetic selectivity of extinctions and extinction risks; (ii) investigating with a high-resolution dataset whether extinctions and survivals were phylogenetically clustered among early Pliensbachian (Early Jurassic) ammonites; (iii) exploring the phylogene…

Evolutionary ProcessesEcological MetricsCombined uselcsh:MedicineBiologyForms of EvolutionExtinction BiologicalPhylogeneticsPhyletic PatternsAnimalsCluster AnalysisEvolutionary SystematicsCladelcsh:ScienceBiologyDeep timeSpecies ExtinctionPhylogeny[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/PaleontologyAmmoniteEvolutionary BiologyMultidisciplinaryExtinctionModels StatisticalPhylogenetic treeEcologyEcologyFossilslcsh:RPaleontologysocial sciencesBiological Evolutionlanguage.human_languagehumanities[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]CephalopodaPhylogenetic PatternExtinction RisklanguageEarth SciencesMacroevolutionlcsh:QPaleoecologyPaleobiologyResearch ArticlePLoS ONE
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