Search results for "Excited state"

showing 10 items of 1387 documents

Protonation of the Biliverdin IXα Chromophore in the Red and Far-Red Photoactive States of a Bacteriophytochrome

2019

The tetrapyrrole chromophore biliverdin IXα (BV) in the bacteriophytochrome from Deinococcus radiodurans (DrBphP) is usually assumed to be fully protonated, but this assumption has not been systematically validated by experiments or extensive computations. Here, we use force field molecular dynamics simulations and quantum mechanics/molecular mechanics calculations with density functional theory and XMCQDPT2 methods to investigate the effect of the five most probable protonation forms of BV on structural stability, binding pocket interactions, and absorption spectra in the two photochromic states of DrBphP. While agreement with X-ray structural data and measured UV/vis spectra suggest that …

Absorption spectroscopyProtein ConformationPopulationProtonationMolecular Dynamics SimulationCrystallography X-Ray010402 general chemistryPhotochemistry01 natural sciencesArticlequantum chemistrychemistry.chemical_compoundMolecular dynamicsPhotochromismBacterial Proteins0103 physical scienceskvanttikemiaMaterials ChemistrymolekyylidynamiikkaPhysical and Theoretical Chemistryeducationta116excited statesphytochromeeducation.field_of_studyBinding SitesBiliverdin010304 chemical physicsChemistryBiliverdineta1182Chromophoremolecular dynamics3. Good health0104 chemical sciencesSurfaces Coatings and FilmsSpectrophotometry UltravioletDensity functional theoryDeinococcusvalokemiaproteiinitThe Journal of Physical Chemistry B
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On the Low-Lying Excited States ofsym-Triazine-Based Herbicides

2005

We report a joint computational and luminescence study on the low-lying excited states of sym-triazines, namely, 1,3,5-triazine (1) and the ubiquitous herbicides atrazine [6-chloro-N2-ethyl-N4-isopropyl-1,3,5-triazine-2,4-diamine (2)] and ametryn [6-methylthio-N2-ethyl-N4-isopropyl-1,3,5-triazine-2,4-diamine (3)]. Geometrical structures, energetics, and transition and state properties of I and 2 were computed at the TD-DFT, CASSCF, and CASPT2 levels of theory. The fluorescence and phosphorescence emission spectra, lifetimes, and fluorescence quantum yields were measured for the three compounds, and from these, the energies of the lowest excited states and their corresponding radiative rates…

Absorption spectroscopyQuantum yieldPhotochemistryMolecular physicsAbsorptionAb initio quantum chemistry methodsOscillometryPressureRadiative transferEmission spectrumPhysical and Theoretical ChemistryMolecular StructureChemistry PhysicalHerbicidesTriazinesChemistryTemperatureHydrogen-Ion ConcentrationModels TheoreticalAtomic and Molecular Physics and OpticsSpectrometry FluorescenceModels ChemicalSpectrophotometryExcited stateAtrazineIndicators and ReagentsPhosphorescenceLuminescenceSoftwareChemPhysChem
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First glimpse of the soft x-ray induced excited spin-state trapping effect dynamics on spin cross-over molecules.

2013

The dynamics of the soft x-ray induced excited spin state trapping (SOXIESST) effect of Fe(phen)(2)(NCS)(2) (Fe-phen) powder have been investigated by x-ray absorption spectroscopy (XAS) using the total electron yield method, in a wide temperature range. The low-spin (LS) state is excited into the metastable high-spin (HS) state at a rate that depends on the intensity of the x-ray illumination it receives, and both the temperature and the intensity of the x-ray illumination will affect the maximum HS proportion that is reached. We find that the SOXIESST HS spin state transforms back to the LS state at a rate that is similar to that found for the light induced excited spin state trapping (LI…

Absorption spectroscopySpin statesChemistryChimie/MatériauxMetastabilityExcited stateTransition temperatureGeneral Physics and AstronomyPhysical and Theoretical ChemistryAtmospheric temperature rangeAtomic physicsLIESSTSpin-½The Journal of chemical physics
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Long-Lived Electronic Coherence of Iodine in the Condensed Phase: Sharp Zero-Phonon Lines in the B↔X Absorption and Emission of I2 in Solid Xe

2015

Our study of B←X absorption of molecular iodine (I2) isolated in a low-temperature crystalline xenon has revealed an exceptionally long-lived electronic coherence in condensed phase conditions. The visible absorption spectrum shows prominent vibronic structure in the form of zero-phonon lines (ZPLs) and phonon side bands (PSBs). The resolved spectrum implies weak interaction of the chromophore to the lattice degrees of freedom. The coherence extends past the vibrational period of the excited state molecule, unlike that observed in any condensed phase environment for I2 so far. The ZP transitions from the relaxing B-state populations were resolved in the hot luminescence when the 532 nm lase…

Absorption spectroscopyta114ChemistryPhononchemistry.chemical_elementChromophoreLaserlaw.inventionXenonlawExcited stateGeneral Materials SciencePhysical and Theoretical ChemistryAtomic physicsExcitationCoherence (physics)Journal of Physical Chemistry Letters
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Pseudo-Jahn–Teller Origin of the Metastable States in Sodium Nitroprusside

2003

Abstract A new model for the photochromic effect in sodium nitroprusside Na 2 [Fe(CN) 5 (NO)]·2H 2 O based on the concept of the pseudo-Jahn–Teller effect is proposed. The model takes into account the electron transfer from the Fe 2+ ion to the π ∗ orbitals of the NO-ligand as well as the vibronic mixing of three electronic states of the Fe–NO fragment through the non-symmetric and full symmetric modes. The problem is solved within the adiabatic approximation. Under certain conditions, the lower sheet of the adiabatic potential is shown to possess three minima with the increasing energies that correspond to the N-bound, sideways bound, and O-bound NO group. The barriers between the minima a…

Adiabatic theoremElectron transferAtomic orbitalChemistryExcited stateJahn–Teller effectMetastabilityAtomic physicsAdiabatic processIon
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Interactions of Ultra-cold Alkaline-earth-like and Alkali Atoms with Light

2019

This paper presents the experimental results of photoionization and photoassociation experiments performed with both ultra-cold alkaline-earth-like and alkali atoms. Photoionization cross-section was studied for 88Sr at the blue magic 390 nm wavelength as well as for 87Rb at 254 nm. We also present preliminary results of photoassociation spectroscopy of the molecular line detected near the dissociation threshold of the excited Rb*Hg molecule at D1 Rb line (795 nm).

Alkaline earth metalMaterials scienceAnalytical chemistrychemistry.chemical_elementPhotoionization01 natural sciencesDissociation (chemistry)Rubidium010309 opticsWavelengthchemistryExcited state0103 physical sciencesMolecule010306 general physicsSpectroscopy2019 Joint Conference of the IEEE International Frequency Control Symposium and European Frequency and Time Forum (EFTF/IFC)
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A modified ansatz for explicitly correlated coupled-cluster wave functions that is suitable for response theory

2009

A modified ansatz for explicitly correlated coupled-cluster wave functions with a single correlation factor is set forward. It is based on the fixed amplitude ansatz of Ten-no [Chem. Phys. Lett. 398, 56 (2004)] to which an extra term is added that allows for the explicitly correlated description of singly excited configurations. The new approach has been implemented for coupled-cluster singles and doubles with the aid of automated techniques. Numerical results are presented for vertical excitation energies, and ground and excited state equilibrium distances and harmonic frequencies of diatomics. The new approach is shown to provide a nearly unbiased description of ground and predominantly s…

AmplitudeCoupled clusterChemistryExcited stateQuantum mechanicsGeneral Physics and AstronomyPhysical and Theoretical ChemistryWave functionDiatomic moleculeExcitationTerm (time)AnsatzThe Journal of Chemical Physics
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Nitroanilines as Quenchers of Pyrene Fluorescence

2012

The quenching of pyrene and 1‐methylpyrene fluorescence by nitroanilines (NAs), such as 2‐, 3‐, and 4‐nitroaniline (2‐NA, 3‐NA, and 4‐NA, respectively), 4‐methyl‐3‐nitroaniline (4‐M‐3‐NA), 2‐methyl‐4‐nitroaniline (2‐M‐4‐NA), and 4‐methyl‐3,5‐dinitroaniline (4‐M‐3,5‐DNA), are studied in toluene and 1,4‐dioxane. Steady‐state fluorescence data show the higher efficiency of the 4‐NAs as quenchers and fit with a sphere‐of‐action model. This suggests a 4‐NA tendency of being in close proximity to the fluorophore, which could be connected with their high polarity/hyperpolarizability. In addition, emission and excitation spectra evidence the formation of emissive pyrene—NA ground‐state complexes in…

Analytical chemistryHyperpolarizabilityPhotochemistryFluorescenceFluorescence spectroscopyAbsorptionDioxaneschemistry.chemical_compoundFOTOQUIMICAANILINASUltrafast laser spectroscopySinglet statePhysical and Theoretical ChemistryFluorescent DyesAniline CompoundsPyrenesQuenching (fluorescence)ChemistryOtras Ciencias QuímicasCiencias QuímicasFluorescenceAtomic and Molecular Physics and OpticsPIRENODESACTIVACIONEnergy TransferExcited statePyreneCIENCIAS NATURALES Y EXACTASTolueneChemPhysChem
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FT-ICR MS studies of ion-molecule reactions of Ru+ and Os+ with oxygen

2005

Abstract The reactions of stored ruthenium and osmium cations with oxygen have been studied in a Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer. In case of osmium the reaction products OsO+ and OsO 2 + have been observed and corresponding reaction-rate constants have been determined. In addition, there is an unreactive fraction of Os+ ions due to the presence of a slightly endothermic reacting ground state. Only the excited states react with oxygen. For ruthenium no spontaneous reaction with oxygen has been observed unless the cyclotron motion of Ru+ was excited. The results are discussed with respect to a similar investigation in a Penning trap-TOF mass spectrometer […

Analytical chemistrychemistry.chemical_elementCondensed Matter PhysicsMass spectrometryOxygenFourier transform ion cyclotron resonanceHassiumRutheniumIonchemistryExcited stateOsmiumPhysical and Theoretical ChemistryInstrumentationSpectroscopyInternational Journal of Mass Spectrometry
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Studies of narrow autoionizing resonances in gadolinium

2003

The autoionization (AI) spectrum of gadolinium between the first and second limits has been investigated by triple-resonance excitation with high-resolution cw lasers. A large number of narrow AI resonances have been observed and assigned total angular momentum J values. The resonances are further divided into members of AI Rydberg series converging to the second limit or other ''interloping'' levels. Fine structure in the Rydberg series has been identified and interpreted in terms of Jc j coupling. A number of detailed studies have been performed on the interloping resonances: These include lifetime determination by lineshape analysis, isotope shifts, hyperfine structure, and photoionizati…

Angular momentumChemistryPhotoionizationAtomic and Molecular Physics and OpticsAnalytical Chemistrysymbols.namesakeAutoionizationTotal angular momentum quantum numberExcited stateRydberg formulasymbolsPhysics::Atomic PhysicsAtomic physicsInstrumentationHyperfine structureSpectroscopyExcitationSpectrochimica Acta Part B: Atomic Spectroscopy
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