Search results for "Extracellular"

showing 10 items of 1220 documents

Microbiological analysis and metagenomic profiling of the bacterial community of an anthropogenic soil modified from typic haploxererts

2022

This work aimed to characterize the microbial communities of an anthropogenic soil originating from application of pedotechniques to Vertisols in a Mediterranean environment. Bare soil profiles were sampled at three depths (0–10 cm, 10–30 cm, and 30–50 cm) and compared with the original soil not transformed at the same depths. The anthropogenic soils were characterized by a higher CaCO3 concentration (360–640 g/kg) than control soil (190–200 g/kg), while an opposite trend was registered for clay, where control soil showed a higher concentration (465 g/kg on average) than anthropogenic soil (355 g/kg on average). Organic carbon content was much higher in the unt…

Global and Planetary ChangeEcologyAnthropogenic soilApplied soil ecologySettore AGR/14 - PedologiaMiSeq IlluminaSettore AGR/16 - MICROBIOLOGIA AGRARIAViable bacteriaanthropogenic soil; applied soil ecology; extracellular polymeric substances; MiSeq Illumina; viable bacteriacomplex mixturesextracellular polymeric substanceExtracellular polymeric substancesNature and Landscape Conservation
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Chapter 6: Swelling of C6 glioma cells and astrocytes from glutamate, high K+ concentrations or acidosis

1992

Publisher Summary With impaired energy supply, cell swelling results from the failure of Na+/K+-ATPase according to the pump-leak model of cell volume regulation. In a series of in vitro studies, glial cell volume changes during defined and strictly controlled alterations of the extracellular environment in vitro. Experiments were performed with C6 glioma cells and astrocytes from primary culture. The major advantages of using C6 cells are the rapid availability of large cell numbers necessary for reliable flow cytometric volume measurements, and the homogeneous cell size distribution permitting the detection of even subtle volume changes. The sodium-potassium pump was blocked by the cardia…

Glutamate receptorIschemiaBiologymedicine.diseaseIn vitroOuabainBiochemistrymedicineExcitatory postsynaptic potentialExtracellularBiophysicsmedicine.symptomAcidosisCardiac glycosidemedicine.drug
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Glial Protection Against Neuronal Damage

1997

Glial homeostatic mechanisms are involved in neuronal protection during the early phase of cerebral ischemia. These protective effects include, among others, glutamate uptake and the regulation of pH in the extracellular space of the brain. Uptake of glutamate goes along with glial swelling, as does the elimination of protons from the glial cytosol. Five transport systems interact in order to maintain a normal intra- and extracellular pH in the brain.

Glutamate uptakeCytosolnervous systemChemistryNeuronal damageIschemiamedicineGlutamate receptorExtracellularNeuronal protectionmedicine.diseaseHomeostasisCell biology
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The Complementary Membranes Forming the Blood-Brain Barrier

2002

Brain capillary endothelial cells form the blood-brain barrier. They are connected by extensive tight junctions, and are polarized into luminal (blood-facing) and abluminal (brain-facing) plasma membrane domains. The polar distribution of transport proteins allows for active regulation of brain extracellular fluid. Experiments on isolated membrane vesicles from capillary endothelial cells of bovine brain demonstrated the polar arrangement of amino acid and glucose transporters, and the utility of such arrangements have been proposed. For instance, passive carriers for glutamine and glutamate have been found only in the luminal membrane of blood-brain barrier cells, while Na-dependent second…

GlutamineClinical BiochemistryGlutamic AcidBiologyBlood–brain barrierBiochemistryAmmoniaExtracellular fluidGeneticsmedicineAnimalsHumansMolecular Biologychemistry.chemical_classificationTight junctionGlucose transporterCell BiologyAmino acidTransport proteinGlutamineGlucoseMembranemedicine.anatomical_structureBiochemistrychemistryBlood-Brain BarrierBiophysicsIUBMB Life (International Union of Biochemistry and Molecular Biology: Life)
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Structure of the Blood–Brain Barrier and Its Role in the Transport of Amino Acids

2005

Brain capillary endothelial cells form the blood-brain barrier (BBB). They are connected by extensive tight junctions, and are polarized into luminal (blood-facing) and abluminal (brain-facing) plasma membrane domains. The polar distribution of transport proteins mediates amino acid (AA) homeostasis in the brain. The existence of two facilitative transporters for neutral amino acids (NAAs) on both membranes provides the brain access to essential AAs. Four Na(+)-dependent transporters of NAA exist in the abluminal membranes of the BBB. Together these systems have the capability to actively transfer every naturally occurring NAA from the extracellular fluid (ECF) to endothelial cells and from…

GlutamineGlutamic AcidMedicine (miscellaneous)Blood–brain barrierAmmoniaExtracellular fluidmedicineAnimalsHumansAmino Acidschemistry.chemical_classificationNutrition and DieteticsTight junctionChemistrySodiumGlutamate receptorBiological Transportgamma-GlutamyltransferasePyrrolidonecarboxylic AcidTransport proteinAmino acidGlutamineMembranemedicine.anatomical_structureBiochemistryBlood-Brain BarrierBiophysicsThe Journal of Nutrition
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Molecular organization of selected prokaryotic S-layer proteins.

2005

Regular crystalline surface layers (S-layers) are widespread among prokaryotes and probably represent the earliest cell wall structures. S-layer genes have been found in approximately 400 different species of the prokaryotic domains bacteria and archaea. S-layers usually consist of a single (glyco-)protein species with molecular masses ranging from about 40 to 200 kDa that form lattices of oblique, tetragonal, or hexagonal architecture. The primary sequen ces of hyperthermophilic archaeal species exhibit some characteristic signatures. Further adaptations to their specific environments occur by various post-translational modifications, such as linkage of glycans, lipids, phosphate, and sulf…

GlycanArchaeal ProteinsImmunologyMolecular Sequence DataApplied Microbiology and BiotechnologyMicrobiologyCell wallBacterial ProteinsCell WallGeneticsExtracellularMolecular BiologyGeneMembrane GlycoproteinsbiologyBacteriaBase SequenceGeneral Medicinebiology.organism_classificationArchaeaBiochemistryCytoplasmbiology.proteinProtein stabilizationBacteriaArchaeaCanadian journal of microbiology
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Mouse Testican-2

2005

Mouse testican-2 was cloned, sequenced, and shown to be a proteoglycan with a multidomain structure closely similar to that of the human ortholog, previously described as a calcium binding extracellular matrix molecule of the BM-40/SPARC/osteonectin family (Vannahme, C., Schubel, S., Herud, M., Gosling, S., Hulsmann, H., Paulsson, M., Hartmann, U., and Maurer, P. (1999). J. Neurochem. 73, 12–20). Recombinant mouse testican-2 was used to prepare specific antibodies that allowed the detection of testican-2 in various brain structures but also in lung, testis, and in several endocrine glands. Although the testican-2 expressed in EBNA-293 cells carried both heparan sulfate and chondroitin/derma…

GlycanGlycosylationbiologyNeuriteCell BiologyHeparan sulfateBiochemistryMolecular biologyDermatan sulfatecarbohydrates (lipids)Extracellular matrixchemistry.chemical_compoundProteoglycanchemistrybiology.proteinOsteonectinMolecular BiologyJournal of Biological Chemistry
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The inhibition of glycerol permeation through aquaglyceroporin-3 induced by mercury(II)

2016

Mercurial compounds are known to inhibit water permeation through aquaporins (AQPs). Although in the last years some hypotheses were proposed, the exact mechanism of inhibition is still an open question and even less is known about the inhibition of the glycerol permeation through aquaglyceroporins. Molecular dynamics (MD) simulations of human aquaporin-3 (AQP3) have been performed up to 200 ns in the presence of Hg2+ ions. For the first time, we have observed the unbiased passage of a glycerol molecule from the extracellular to cytosolic side. Moreover, the presence of Hg2+ ions covalently bound to Cys40 leads to a collapse of the aromatic/arginine selectivity filter (ar/R SF), blocking th…

Glycerol0301 basic medicineMolecular dynamicCell Membrane PermeabilityBiochemistryProtein Structure Secondarychemistry.chemical_compoundGLPFCOORDINATIONCRYSTALEscherichia coli ProteinsPermeationBiochemistryCovalent bondSettore CHIM/03 - Chimica Generale E InorganicaPhosphatidylcholinesCOMPLEXESProtein BindingSTRUCTURAL BASISCations DivalentPlasmodium falciparumAquaporinCYSTEINE-189Molecular Dynamics SimulationMolecular dynamicsAquaporinsWATER CHANNELInorganic Chemistry03 medical and health sciencesEscherichia coliGlycerolExtracellularHumansMoleculePERMEABILITYProtein Structure QuaternaryAquaporin 3Binding SitesAQUAPORIN INHIBITIONWaterBiological TransportMembranes ArtificialAquaglyceroporinMercurySIMULATIONSProtein Structure TertiaryCytosolWater permeation030104 developmental biologyAquaglyceroporinschemistryStructural Homology ProteinBiophysicsGlycerol permeationJournal of Inorganic Biochemistry
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Validation of brain extracellular glycerol as an indicator of cellular membrane damage due to free radical activity after traumatic brain injury.

2008

Following severe traumatic brain injury (TBI), increasing oxygen delivery to the brain has been advocated as a useful strategy to reverse mitochondrial dysfunction and improve neurological outcome. However, this might also promote overproduction of free radicals, responsible for lipid peroxidation and hence brain cell damage. Therefore, a method for monitoring this potential adverse effect in humans is desirable. Glycerol, an end product of phospholipid breakdown, easily detectable in the human brain by means of microdialysis, might represent a reliable indicator of free radical-induced cell membrane damage. Brain microdialysates were collected from 24 adult male Sprague-Dawley rats over a …

GlycerolMaleCellular membraneMicrodialysisFree RadicalsTraumatic brain injuryMicrodialysisPharmacologyAntioxidantsHead traumaCyclic N-OxidesRats Sprague-Dawleychemistry.chemical_compoundmedicineExtracellularGlycerolAnimalsbusiness.industryCell MembraneBrainExtracellular FluidMetabolismmedicine.diseaseRatsnervous systemchemistryAnesthesiaBrain InjuriesOxygen deliverySpin LabelsNeurology (clinical)businessJournal of neurotrauma
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Inhibition of gluconeogenesis by extracellular ATP in isolated rat hepatocytes.

1991

The aim of this study was to determine the effect of externally added ATP on gluconeogenesis by isolated hepatocytes from starved rats. High concentrations of extracellular ATP inhibited gluconeogenesis from lactate and pyruvate but not from glycerol or fructose. This inhibition was associated with an increase in intracellular adenosine contents. ADP, AMP, or adenosine but not guanosine 5'triphosphate, inosine 5' triphosphate, or adenine also inhibited gluconeogenesis. alpha, beta-Methylene-ATP, a nonmetabolizable structural analogue of ATP, did not affect the rate of gluconeogenesis. Intracellular ATP levels were increased by externally added ATP or adenosine, but ATP-to-ADP ratios in the…

GlycerolMalePhysiologyFructoseBiologyAdenosine TriphosphateAdenine nucleotidePhysiology (medical)Pyruvic AcidmedicineExtracellularAnimalsGlycolysisLactic AcidPyruvatesChemiosmosisGluconeogenesisRats Inbred StrainsMetabolismAdenosineRatsAdenosine DiphosphateBiochemistryGluconeogenesisLiverLactatesPhosphoenolpyruvate carboxykinasemedicine.drugThe American journal of physiology
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