Search results for "FRAGMENT"

showing 10 items of 1612 documents

Isolation and characterization of nonpathogenic Fusarium oxysporum isolates from the rhizosphere of healthy banana plants

2006

Publication Inra prise en compte dans l'analyse bibliométrique des publications scientifiques mondiales sur les Fruits, les Légumes et la Pomme de terre. Période 2000-2012. http://prodinra.inra.fr/record/256699; One of the most serious diseases of banana is fusarium wilt, caused by Fusarium oxysporum f.sp. cubense (Foc). The objectives of this study were to isolate and identify nonpathogenic F. oxysporum strains from soils suppressive to banana wilt, and to determine the diversity of these isolates. More than 100 Fusarium strains were isolated from the rhizosphere of banana plants and identified to species level. Pathogenicity testing was carried out to confirm that these isolates were nonp…

0106 biological sciencesFusariumVeterinary medicinePanama disease[SDV]Life Sciences [q-bio]biological controlPlant ScienceHorticulture01 natural sciencesHaeIII03 medical and health sciencesFusarium oxysporumBotanyGeneticsmedicineRELATION PLANTE-MICROORGANISME030304 developmental biology2. Zero hunger0303 health sciencesRhizospheresuppressive soilsbiologyfusarium wilt of bananaBANANIERpanama diseasefood and beveragesFungi imperfectibiology.organism_classificationFusarium wilt[SDE]Environmental SciencesRestriction fragment length polymorphismAgronomy and Crop Science010606 plant biology & botanymedicine.drugPlant Pathology
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Patterns of genetic variability and habitat occupancy in Crepis triasii (Asteraceae) at different spatial scales: insights on evolutionary processes …

2012

International audience; Background and Aims Archipelagos are unique systems for studying evolutionary processes promoting diversification and speciation. The islands of the Mediterranean basin are major areas of plant richness, including a high proportion of narrow endemics. Many endemic plants are currently found in rocky habitats, showing varying patterns of habitat occupancy at different spatial scales throughout their range. The aim of the present study was to understand the impact of varying patterns of population distribution on genetic diversity and structure to shed light on demographic and evolutionary processes leading to population diversification in Crepis triasii, an endemic pl…

0106 biological sciencesGene FlowGenetic MarkersGenetic Speciation[SDV]Life Sciences [q-bio]PopulationAllozymesBalearic floraPlant ScienceBiology010603 evolutionary biology01 natural sciencesCrepisQuaternaryEvolution Molecular03 medical and health sciencesGenetic driftfragmentation14. Life underwatereducationGenetic erosionEcosystem030304 developmental biologyPlant evolution0303 health scienceseducation.field_of_studyGenetic diversityCrepis triasiiEcologycontinental islandsPopulation sizeGenetic Variationspatially structured populationsgenetic diversityOriginal Articles15. Life on landBiological EvolutionSGSGenetic SpeciationGenetics PopulationSpainGenetic structurechloroplast microsatellitesgenetic drift
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Multilocus typing for characterization of ‘Candidatus Phytoplasma asteris’-related strains in several ornamental species in Italy

2018

Different ornamental plants showing symptoms referable to phytoplasma presence and collected between 1993 and 2015 in various floricultural areas in north and south of Italy, enclosing Sicily, resulted to be infected by ‘Candidatus Phytoplasma asteris’-related strains, and after PCR/RFLP identification on 16Sr gene were assigned to 16SrI-B subgroup. These infected samples were employed for phytoplasma strain differentiation on tuf, groel, rp and amp genes. In particular, the 23 phytoplasma strains employed were from hydrangea (5), primula (3), gentian (2), petunia (2) and gerbera (1) samples showing flower virescence; from gladiolus samples both in vivo and in micropropagation (2) showing t…

0106 biological sciencesGeneticsCandidatus Phytoplasma asterisSettore AGR/12 - Patologia Vegetale04 agricultural and veterinary sciencesPCR/RFLP analyses 16S rRNA gene rp gene GroEl gene tuf geneHorticultureRibosomal RNABiology01 natural scienceslaw.inventionphytoplasmas ornamental plants 16S RRNA gene groEl genelawGenetic markerGenotypeOrnamental plant040103 agronomy & agriculture0401 agriculture forestry and fisheriesTypingRestriction fragment length polymorphismPolymerase chain reaction010606 plant biology & botanyActa Horticulturae
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Disentangling phylogeography, polyploid evolution and taxonomy of a woodland herb (Veronica chamaedrys group, Plantaginaceae s.l.) in southeastern Eu…

2010

Southeastern Europe is a centre of European biodiversity, but very little is known about factors causing the observed richness. Here, we contribute to fill this gap by reconstructing the spatio-temporal diversification of the cytologically variable and taxonomically intricate complex of Veronica chamaedrys (Plantaginaceae s.l.), growing in open forests, forest edges and grasslands, with flow cytometry, molecular markers (AFLPs, plastid DNA sequences) and morphometry. Our results show that both diploid and tetraploid cytotypes are widespread, but diploids predominate on the southern Balkan Peninsula. Plastid sequences suggest a first split into three main lineages in the mid-Pleistocene and …

0106 biological sciencesGenome sizeAFLPBiodiversityWoodland010603 evolutionary biology01 natural sciencesArticlePolyploidyEvolution Molecular03 medical and health sciencesPolyploidSoutheastern Europeparasitic diseasesGeneticsPlantaginaceaeAmplified Fragment Length Polymorphism AnalysisMolecular BiologyPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyMorphometricsPlastid DNA0303 health sciencesbiologyEcologyVeronica chamaedrysfood and beveragesBalkan Peninsula15. Life on landbiology.organism_classificationClassificationVeronicaEuropePhylogeographyPhylogeographyTaxonomy (biology)Morphometricsgeographic locationsVeronica chamaedrysGenome PlantMolecular Phylogenetics and Evolution
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Species richness and food web structure of soil decomposer community as affected by the size of habitat fragment and habitat corridors

2005

While most ecologists agree that the effects of fragmentation on diversity of organisms are predominantly negative and that the scale of fragmentation defines their severity, the role of habitat corridors in mitigating those effects still remains controversial. This ambiguousness rests largely on various difficulties in experimentation, a problem partially solved in the present paper by the use of easily manipulated soil communities. In this 2.5-year-long field experiment, we investigated the responses of soil decomposer organisms (from microbes to mesofaunal predators) to habitat fragment size, in the presence or absence of habitat corridors connecting the fragments. The habitat fragments …

0106 biological sciencesGlobal and Planetary Changeeducation.field_of_studyHabitat fragmentationEcologyEcology010604 marine biology & hydrobiologySoil biologyRare speciesPopulation15. Life on landWildlife corridorBiology010603 evolutionary biology01 natural sciencesDecomposerHabitat13. Climate actionparasitic diseasesEnvironmental ChemistrySpecies richnesseducationGeneral Environmental ScienceGlobal Change Biology
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Effects of small-scale habitat fragmentation, habitat corridors and mainland dispersal on soil decomposer organisms

2006

Abstract Habitat corridors have been suggested to be one possible way to reduce the often negative effects of habitat fragmentation. In the present experiment, we focused on small habitat fragments (humus patches) inhabited by soil decomposer organisms. These fragments were either unconnected or connected with each other by habitat (humus) corridors. Moreover, these systems were either isolated from the mainland by a dispersal barrier (plastic “walls”) or were open to dispersal from the mainland. The fragments and corridors were embedded in a matrix of mineral soil that was expected to be uninhabitable or at least an unpreferred habitat for the organisms studied. Undisturbed forest soil fun…

0106 biological sciencesHabitat fragmentationEcologyEcologySoil Science04 agricultural and veterinary sciences15. Life on landWildlife corridorBiology010603 evolutionary biology01 natural sciencesAgricultural and Biological Sciences (miscellaneous)HumusDecomposerHabitatAbundance (ecology)parasitic diseases040103 agronomy & agriculture0401 agriculture forestry and fisheriesBiological dispersalMainlandApplied Soil Ecology
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Soil decomposer community as a model system in studying the effects of habitat fragmentation and habitat corridors

2008

Abstract Due to the practical difficulties of experimental study of habitat fragmentation and habitat corridors at the landscape scale, the use of smaller-scale model systems has been offered as a feasible alternative to uncover the ecological phenomena taking place in fragmented environments. In this mini-review, we consider the applicability of the soil decomposer community as such a model system. For the most part, this article is based on the few studies that have explicitly addressed this question by experimental manipulations of the natural habitat of soil decomposer community. However, to broaden the view, we also capitalize upon studies focusing on the effects of isolation and soil …

0106 biological sciencesHabitat fragmentationEcologySoil biologyFragmentation (computing)Soil ScienceBiota04 agricultural and veterinary sciences15. Life on landWildlife corridor010603 evolutionary biology01 natural sciencesMicrobiologyDecomposerHabitat13. Climate action040103 agronomy & agriculture0401 agriculture forestry and fisheriesBiological dispersalEnvironmental scienceSoil Biology and Biochemistry
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The asexual enchytraeid worm Cognettia sphagnetorum (Oligochaeta) has increased Cu resistance in polluted soil

2001

We studied Cu resistance in the asexual (reproduction through fragmentation) enchytraeid worms (Cognettia sphagnetorum, Oligochaeta) originating from two sites: one uncontaminated, and another contaminated by heavy metals. Adult worms were smaller and population density was lower at the polluted site. However, adults from the contaminated site had better survival in Cu-contaminated soil, but lower survival as juveniles (fragments). As we do not know the genetic basis of Cu resistance of the worms, it may have been reached by acclimatization via induced Cu regulation. Because fragmentation is the only mode of reproduction, all phenotypic properties (including resistance) of a parental genera…

0106 biological sciencesHealth Toxicology and Mutagenesismedia_common.quotation_subjectPopulation DynamicsDrug ResistanceAsexual reproduction010501 environmental sciencesToxicology010603 evolutionary biology01 natural sciencesAcclimatizationPopulation densityReproduction AsexualBotanyAnimalsSoil PollutantsOligochaeta0105 earth and related environmental sciencesmedia_commonFragmentation (reproduction)biologyGeneral MedicineEnchytraeidaebiology.organism_classificationAdaptation PhysiologicalSurvival AnalysisPollutionSoil contaminationOligochaetaBody ConstitutionReproductionCopperEnvironmental Pollution
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Hydrogen peroxide induces programmed cell death features in cultured tobacco BY-2 cells, in a dose-dependent manner

2001

Active oxygen species (AOS), especially hydrogen peroxide, play a critical role in the defence of plants against invading pathogens and in the hypersensitive response (HR). This is characterized by the induction of a massive production of AOS and the rapid appearance of necrotic lesions is considered as a programmed cell death (PCD) process during which a limited number of cells die at the site of infection. This work was aimed at investigating the mode of cell death observed in cultures of BY-2 tobacco cells exposed to H(2)O(2). It was shown that H(2)O(2) is able to induce various morphological cell death features in cultured tobacco BY-2 cells. The hallmarks of cell death observed with fl…

0106 biological sciencesHypersensitive responseTobacco BY-2 cellsProgrammed cell deathPhysiologyApoptosisPlant ScienceDNA FragmentationBiology01 natural sciences[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics03 medical and health sciencesBotanyTobaccomedicineFragmentation (cell biology)Cell damageCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biologyCell Nucleus0303 health sciencesDose-Response Relationship DrugHydrogen Peroxide[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsmedicine.diseaseMolecular biologyChromatinPlants ToxicCell cultureApoptosisCULTURE DE CELLULESignal transduction010606 plant biology & botanySignal Transduction
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CHANGES IN COLLEMBOLA RICHNESS AND DIVERSITY ALONG A GRADIENTOF LAND-USE INTENSITY : A pan European study

2006

Changes in Collembola richness and diversity along a land-use intensity gradient were studied in eight European countries (Portugal, Spain, France, Switzerland, Hungary, UK, Ireland and Finland). In each country a set of six 1 km2 land-use units (LUUs) were selected forming a gradient ranging from natural forest to agricultural dominated landscapes, passing through mixed-use ones. In addition to data on Collembola, detailed information regarding landscape diversity and structure was collected for each LUU. A total of 47,774 individuals were identified from 281 species. Collembola reacted not only to changes in the diversity of the landscape, but also to the composition of that diversity and…

0106 biological sciencesLand-use intensityBiodiversitySoil Science[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study010603 evolutionary biology01 natural sciencesland-use intensityEcology Evolution Behavior and Systematics[SDV.EE]Life Sciences [q-bio]/Ecology environmentLand useAgroforestryEcologybusiness.industryFragmentation (computing)collembola04 agricultural and veterinary sciences15. Life on landlandscape diversityLandscape diversityGeographyAgricultureland use intensitybioindicators040103 agronomy & agricultureBioindicators0401 agriculture forestry and fisheriesCollembolaAlpha diversitySpecies richnessbusinessBioindicatorGlobal biodiversity
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