Search results for "FUNGAL"

showing 10 items of 1116 documents

Chromatin structure of the yeast SUC2 promoter in regulatory mutants

1992

We have previously suggested that two positioned nucleosomes are removed from the promoter of the Saccharomyces cerevisiae SUC2 gene upon derepression by glucose starvation. To gain further insight into the changes accompanying derepression at the chromatin level we have studied the chromatin structure of the SUC2 promoter in several mutants affecting SUC2 expression. The non-derepressible mutants snf1, snf2 and snf5 present a chromatin structure characteristic of the repressed state, irrespective of the presence or absence of glucose. The non-repressible mutants, mig1 and ssn6, as well as the double mutant snfs sn6 exhibit an opened chromatin structure even in the presence of glucose. Thes…

GenotypeGenes FungalRestriction MappingMutantSaccharomyces cerevisiaeSaccharomyces cerevisiaeGeneticsMicrococcal NucleaseNucleosomeChromatin structure remodeling (RSC) complexDNA FungalPromoter Regions GeneticMolecular BiologyChIA-PETDerepressionBase SequenceModels Geneticbiologyfungibiology.organism_classificationChromatinChromatinDNA-Binding ProteinsGlucoseBiochemistryMutationbiology.proteinBivalent chromatinMolecular and General Genetics MGG
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Comparative Transcriptomic Analysis Reveals Similarities and Dissimilarities in Saccharomyces cerevisiae Wine Strains Response to Nitrogen Availabili…

2015

Nitrogen levels in grape-juices are of major importance in winemaking ensuring adequate yeast growth and fermentation performance. Here we used a comparative transcriptome analysis to uncover wine yeasts responses to nitrogen availability during fermentation. Gene expression was assessed in three genetically and phenotypically divergent commercial wine strains (CEG, VL1 and QA23), under low (67 mg/L) and high nitrogen (670 mg/L) regimes, at three time points during fermentation (12 h, 24 h and 96 h). Two-way ANOVA analysis of each fermentation condition led to the identification of genes whose expression was dependent on strain, fermentation stage and on the interaction of both factors. The…

GenotypeNitrogenScienceSaccharomyces cerevisiaeDown-RegulationIndustrial fermentationWineSaccharomyces cerevisiaePolymerase Chain Reaction03 medical and health sciencesTranscripció genèticaCluster AnalysisDNA FungalNitrogen cycle030304 developmental biologyWinemaking2. Zero hungerWine0303 health sciencesMultidisciplinarybiology030306 microbiologyGene Expression ProfilingQRfood and beveragesbiology.organism_classificationYeastUp-RegulationGene expression profilingPhenotypeBiochemistryFermentationMedicineFermentationTranscriptomeResearch ArticlePLoS ONE
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Molecular Characterization of New Natural Hybrids of Saccharomyces cerevisiae and S. kudriavzevii in Brewing▿ †

2008

ABSTRACT We analyzed 24 beer strains from different origins by using PCR-restriction fragment length polymorphism analysis of different gene regions, and six new Saccharomyces cerevisiae × Saccharomyces kudriavzevii hybrid strains were found. This is the first time that the presence in brewing of this new type of hybrid has been demonstrated. From the comparative molecular analysis of these natural hybrids with respect to those described in wines, it can be concluded that these originated from at least two hybridization events and that some brewing hybrids share a common origin with wine hybrids. Finally, a reduction of the S. kudriavzevii fraction of the hybrid genomes was observed, but th…

GenotypeSaccharomyces cerevisiaeMolecular Sequence DataMycologySaccharomyces cerevisiaeApplied Microbiology and BiotechnologySaccharomycesModels BiologicalPolymerase Chain ReactionCluster AnalysisDNA FungalPhylogenyHybridWineGeneticsRecombination GeneticEcologybiologyAscomycotaEthanolbusiness.industrySaccharomyces eubayanustechnology industry and agriculturefood and beveragesBeerSequence Analysis DNAbiology.organism_classificationBrewingbusinessSaccharomyces kudriavzeviiPolymorphism Restriction Fragment LengthFood ScienceBiotechnology
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The impact of arthropods on fungal community structure in Lascaux Cave

2009

Aims: To determine the major components of the fungal population present in Lascaux Cave, France. The ceiling, walls, sediments and soil were colonized by Fusarium solani in 2001 and later, in 2006, black stains appeared. However, the origin of the successive fungal invasions is unknown as well as the ecology of the cave. Methods and Results: The primers nu-SSU-0817F and nu-SSU-1536R were used for the direct amplification of fungal 18S-rDNA sequences from 11 samples. A total of 607 clones were retrieved. Eight out of the ten most abundant phylotypes corresponded to fungi associated with arthropods and represented about 50% of the clones. Conclusions: Entomophilous fungi play an important ro…

Geological Phenomena[SDV.BA] Life Sciences [q-bio]/Animal biology[SDV]Life Sciences [q-bio]ROCK ART PAINTINGSPopulation DynamicsSoil fungiBiologyBLACK STAINSGEOSMITHIAApplied Microbiology and BiotechnologyDNA RibosomalENTOMOPHILUS FUNGI03 medical and health sciencesCaveAnimalsDNA Fungal[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biology0303 health sciencesgeographygeography.geographical_feature_category030306 microbiologyEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyARTHROPODSISARIAFungal geneticsCommunity structureFungiGeneral Medicine15. Life on land[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycologyhumanities[SDV] Life Sciences [q-bio][SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyEthnologyChristian ministryPaintingsFranceBiotechnology
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Enhanced enzymatic activity of glycerol-3-phosphate dehydrogenase from the cryophilic Saccharomyces kudriavzevii

2014

During the evolution of the different species classified within the Saccharomyces genus, each one has adapted to live in different environments. One of the most important parameters that have influenced the evolution of Saccharomyces species is the temperature. Here we have focused on the study of the ability of certain species as Saccharomyces kudriavzevii to grow at low temperatures, in contrast to Saccharomyces cerevisiae. We observed that S. kudriavzevii strains isolated from several regions are able to synthesize higher amounts of glycerol, a molecule that has been shown to accumulate in response to freeze and cold stress. To explain this observation at the molecular level we studied t…

GlycerolApplied MicrobiologyEnzyme Metabolismlcsh:MedicineYeast and Fungal ModelsWineEthanol fermentationSaccharomycesBiochemistrychemistry.chemical_compoundMolecular cell biologyLow temperaturelcsh:ScienceCellular Stress ResponsesMultidisciplinarybiologyTemperatureEnzymesCold TemperatureBiochemistryMetabolic PathwaysOsmotic shockAlcoholic fermentationSaccharomyces kudriavzeviiResearch ArticleOsmotic shockSaccharomyces cerevisiaeDNA transcriptionGlycerolphosphate DehydrogenaseSaccharomyces cerevisiaeBiosynthesisMicrobiologyGenètica molecularSaccharomycesModel OrganismsGlycerolS. kudriavzeviiBiologyMicrobial MetabolismEnzyme Kineticslcsh:Rbiology.organism_classificationGlycerol-3-phosphate dehydrogenaseMetabolismchemistryFermentationFermentationlcsh:QGene expression
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High osmolarity glycerol (HOG) signalling in Magnaporthe oryzae: Identification of MoYPD1 and its role in osmoregulation, fungicide action, and patho…

2015

AbstractThis study comprises a first functional analysis of an YPD1-homologue in filamentous phytopathogenic fungi and its role in the HOG signalling pathway. We generated a gene deletion mutant of the gene MoYPD1 in Magnaporthe oryzae and characterized the resulting mutant strain. We have shown that MoYpd1p is a component of the phosphorelay system acting in the HOG pathway due to its Y2H protein interaction with the HKs MoHik1p and MoSln1p as well as with the response regulator MoSsk1p. Fungicidal activity of fludioxonil was reported to be based on the inhibition of MoHik1p resulting in hyperactivation of the HOG signalling pathway and lethality. Western analysis proved that both, osmotic…

GlycerolFilamentous fungiOsmotic shockMutantVirulenceFludioxonilDioxolesPlant ScienceFludioxonilBiologyMicrobiologyFungal ProteinsOsmoregulationOsmotic PressureGeneticsPyrrolesPhosphotransferGeneEcology Evolution Behavior and SystematicsPlant DiseasesVirulenceOsmolar ConcentrationOryzaHedgehog signaling pathwayFungicides IndustrialCell biologyMagnaportheResponse regulatorInfectious DiseasesPhosphorylationSignal TransductionEnvironmental signallingFungal Biology
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Rapid adaptation of signaling networks in the fungal pathogen Magnaporthe oryzae

2019

Abstract Background One fundamental question in biology is how the evolution of eukaryotic signaling networks has taken place. “Loss of function” (lof) mutants from components of the high osmolarity glycerol (HOG) signaling pathway in the filamentous fungus Magnaporthe oryzae are viable, but impaired in osmoregulation. Results After long-term cultivation upon high osmolarity, stable individuals with reestablished osmoregulation capacity arise independently from each of the mutants with inactivated HOG pathway. This phenomenon is extremely reproducible and occurs only in osmosensitive mutants related to the HOG pathway – not in other osmosensitive Magnaporthe mutants. The major compatible so…

GlycerolMagnaportheved/biology.organism_classification_rank.speciesMutantGenomeSalt StressTranscriptome0302 clinical medicineOsmoregulationLoss of Function MutationGene Expression Regulation FungalGene Regulatory NetworksSuppressorReestablishment of osmoregulation0303 health sciencesbiologyMagnaporthe oryzaeRewiringAdaptation PhysiologicalRapid adaptationCell biologyMagnaportheOsmoregulationEpigeneticsGenome FungalBiotechnologySignal TransductionResearch Articlelcsh:QH426-470lcsh:BiotechnologyDioxolesFungal Proteins03 medical and health sciencesDrug Resistance Fungallcsh:TP248.13-248.65GeneticsPyrrolesModel organismGene030304 developmental biologyPlant DiseasesOsmotic concentrationved/biologyGene Expression ProfilingEvolution of signaling networksHOG pathwayOryzabiology.organism_classificationlcsh:Genetics030217 neurology & neurosurgery
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Characterization of a novel open reading frame, urf a, in the mitochondrial genome of fission yeast: correlation of urf a mutations with a mitochondr…

1991

Between the genes for tRNA(gin) and tRNA(ile) an open reading frame of 227 amino acids has been identified which is unique among known mitochondrial genomes and which has been termed urf a (Lang et al. 1983; Kornrumpf et al. 1984). It uses the "mitochondrial" genetic code, i.e., it contains a TGA codon, whereas all other protein-encoding genes, and all but one intronic open reading frame, use the "standard" genetic code (UGG for tryptophan). A previous paper has demonstrated that "mutator" strains show an increased formation of mitochondrial drug-resistant and respiration-deficient mutants (including deletions). In this paper we show that the mutator activity is correlated with mutations in…

GlycerolMitochondrial DNAMutantMolecular Sequence DataExtrachromosomal InheritanceBiologymedicine.disease_causeDNA MitochondrialFrameshift mutationFungal ProteinsMitochondrial ProteinsOpen Reading FramesGene Expression Regulation FungalSchizosaccharomycesGeneticsmedicineAmino Acid SequenceCodonDNA FungalFrameshift MutationGeneGeneticsMutationTranslational frameshiftBase SequenceGeneral MedicineGenetic codeOpen reading framePhenotypeMutationSchizosaccharomyces pombe ProteinsCurrent genetics
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The yeast osmosensitive mutant fps1Δ transformed by the cauliflower BobTIP1;1 aquaporin withstand a hypo-osmotic shock

2005

AbstractOsmoregulation plays an important role in cellular responses to osmotic stress in plants and in yeast. Aquaporins contribute to osmotic adjustment by facilitating transport of water or solutes across membranes. The tonoplastic water channel BobTIP1;1 (original name BobTIP26-1) genes are upregulated during dessication stress in cauliflower meristematic tissue. To investigate the physiological importance of BobTIP1;1, we expressed it in a Saccharomyces cerevisiae osmosensitive mutant fps1Δ. We showed that the defect in the yeast glycerol plasma membrane transporter is complemented by a plant cDNA encoding the aquaporin BobTIP1;1 which is localized in the vacuolar membrane of the compl…

GlycerolOsmotic stressOsmosisDNA ComplementarySaccharomyces cerevisiae ProteinsTime FactorsOsmotic shockSaccharomyces cerevisiaeMutantBlotting WesternGenes FungalBiophysicsAquaporinBrassicaSaccharomyces cerevisiaeOsmosisAquaporinsGenes PlantBiochemistryPolymerase Chain ReactionStructural BiologyGeneticsCloning MolecularFluorescent Antibody Technique Indirectγ-TIPMolecular BiologyPlant ProteinsbiologyAquaporinCell MembraneGenetic Complementation TestMembrane ProteinsWaterVacuolar membraneCell BiologyIntracellular Membranesbiology.organism_classificationYeastHypo-osmotic shockKineticsMembranePhenotypeBiochemistryGene Expression RegulationMutationVacuolesOsmoregulationElectrophoresis Polyacrylamide GelFEBS Letters
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The yeast Starmerella bacillaris (synonym Candida zemplinina) shows high genetic diversity in winemaking environments.

2015

International audience; The yeast Candida zemplinina (Starmerella bacillaris) is frequently isolated from grape and wine environments. Its enological use in mixed fermentation with Saccharomyces cerevisiae has been extensively investigated these last few years, and several interesting features including low ethanol production, fructophily, glycerol and other metabolites production, have been described. In addition, molecular tools allowing the characterization of yeast populations have been developed, both at the inter- and intraspecific levels. However, most of these fingerprinting methods are not compatible with population genetics or ecological studies. In this work, we developed 10 micr…

GlycerolStarmerella bacillaris microsatellite SSR oenology grape mustmicrosatelliteGenotypeGenotyping Techniques[SDV]Life Sciences [q-bio]Saccharomyces cerevisiaePopulation geneticsWineFructoseSaccharomyces cerevisiaestarmerella bacillarisApplied Microbiology and BiotechnologyMicrobiology[SDV.IDA]Life Sciences [q-bio]/Food engineeringBotanymust[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringVitisSelection GeneticDNA FungalWinemakingOenologyCandidaWineGenetic diversitybiologyBase SequenceEthanolGeographyGenetic VariationGeneral MedicineSequence Analysis DNAgrapebiology.organism_classificationSSRYeastCandida zemplininaFermentationoenologyGenome FungalMicrosatellite Repeats
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