Search results for "Factual"

showing 10 items of 359 documents

Ligand-based discovery of novel trypanosomicidal drug-like compounds: In silico identification and experimental support

2010

Abstract Two-dimensional bond-based linear indices and linear discriminant analysis are used in this report to perform a quantitative structure–activity relationship study to identify new trypanosomicidal compounds. A database with 143 anti-trypanosomal and 297 compounds having other clinical uses, are utilized to develop the theoretical models. The best discriminant models computed using bond-based linear indices provides accuracies greater than 90 for both training and test sets. Our models identify as anti-trypanosomals five out of nine compounds of a set of already-synthesized substances. The in vitro anti-trypanosomal activity of this set against epimastigote forms of Trypanosoma cruzi…

Databases FactualMolecular modelCell SurvivalStereochemistryTrypanosoma cruziIn silicoNitro compoundQuantitative Structure-Activity RelationshipComputational biologyLigandsChemometricsDrug DiscoveryAnimalsHumansChagas DiseaseTrypanosoma cruziAmastigotePharmacologychemistry.chemical_classificationLife Cycle StagesbiologyOrganic ChemistryDiscriminant AnalysisBiological activityGeneral MedicineFibroblastsModels Theoreticalbiology.organism_classificationLinear discriminant analysisTrypanocidal AgentsHigh-Throughput Screening AssayschemistryAlgorithmsSoftwareEuropean Journal of Medicinal Chemistry
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Coincident glutamatergic depolarizations enhance GABAA receptor-dependent Cl- influx in mature and suppress Cl- efflux in immature neurons.

2021

The impact of GABAergic transmission on neuronal excitability depends on the Cl--gradient across membranes. However, the Cl--fluxes through GABAA receptors alter the intracellular Cl- concentration ([Cl-]i) and in turn attenuate GABAergic responses, a process termed ionic plasticity. Recently it has been shown that coincident glutamatergic inputs significantly affect ionic plasticity. Yet how the [Cl-]i changes depend on the properties of glutamatergic inputs and their spatiotemporal relation to GABAergic stimuli is unknown. To investigate this issue, we used compartmental biophysical models of Cl- dynamics simulating either a simple ball-and-stick topology or a reconstructed CA3 neuron. Th…

Databases FactualPhysiologyNervous SystemBiochemistrySynaptic TransmissionAnimal CellsMedicine and Health SciencesCl effluxBiology (General)Receptorgamma-Aminobutyric AcidNeuronsNeuronal PlasticityEcologyNeuronal MorphologyGABAA receptorChemistryPyramidal CellsNeurochemistryNeurotransmittersCA3 Region HippocampalElectrophysiologymedicine.anatomical_structureComputational Theory and MathematicsModeling and SimulationGABAergicAnatomyCellular TypesReceptor PhysiologyIntracellularResearch ArticleCell PhysiologyQH301-705.5Models NeurologicalNeurophysiologyMembrane PotentialCellular and Molecular NeuroscienceGlutamatergicChloridesGeneticsmedicineAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsBiology and Life SciencesComputational BiologyCell BiologyNeuronal DendritesReceptors GABA-ACellular NeuroscienceSynapsesCa3 pyramidal neuronDepolarizationNeuronNeuroscienceNeurosciencePLoS Computational Biology
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Principal component analysis on molecular descriptors as an alternative point of view in the search of new Hsp90 inhibitors

2009

Inhibiting a protein that regulates multiple signal transduction pathways in cancer cells is an attractive goal for cancer therapy. Heat shock protein 90 (Hsp90) is one of the most promising molecular targets for such an approach. In fact, Hsp90 is a ubiquitous molecular chaperone protein that is involved in folding, activating and assembling of many key mediators of signal transduction, cellular growth, differentiation, stress-response and apoptothic pathways. With the aim to analyze which molecular descriptors have the higher importance in the binding interactions of these classes, we first performed molecular docking experiments on the 187 Hsp90 inhibitors included in the BindingDB, a pu…

Databases FactualProtein ConformationDrug Evaluation PreclinicalCancer therapyPrincipal component analysiNaphtholsBiochemistryBinding databaseMolecular descriptorsStructure-Activity RelationshipStructural BiologyMolecular descriptorHeat shock proteinComputer SimulationHSP90 Heat-Shock ProteinsPrincipal Component AnalysisBinding SitesbiologyHeat shock proteinOrganic ChemistryComputational BiologyIsoxazolesHsp90Settore CHIM/08 - Chimica FarmaceuticaComputational MathematicsBiochemistryPurinesDocking (molecular)Principal component analysisMolecular dockingbiology.proteinPyrazolesBindingDBSignal transduction
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Nursing interventions of choice for the prevention and treatment of suicidal behaviour: The umbrella review protocol

2022

Abstract Aim To determine which interventions, from a nursing perspective, can be considered as the interventions of choice for the prevention and treatment of suicidal behaviour. In this way, the umbrella review attempts to identify nursing interventions from the Nursing Interventions Classification (NIC) taxonomy with evidence for this purpose. Design Descriptive study protocol. Methods This umbrella review will consist of an extensive, systematic search of published systematic reviews and meta‐analyses of studies examining interventions of choice for the prevention and treatment of suicidal behaviour. A systematic search of papers indexed in PubMed, CINAHL, Cochrane Database of Systemati…

Databases FactualScopusPsychological interventionRT1-120CINAHLNursingSuicidal IdeationStudy ProtocolNursingMeta-Analysis as TopicNursing Interventions ClassificationmedicineHumansRisk reduction behaviorSuicidal ideationGeneral NursingProtocol (science)Research ethicsAttempted suicideSuicideReview Literature as TopicSystematic reviewRisk factorsmedicine.symptomPsychologySystematic Reviews as Topic
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Definitions and measurement of health literacy in health and medicine research: a systematic review

2022

ObjectivesThe way health literacy is understood (conceptualised) should be closely linked to how it is measured (operationalised). This study aimed to gain insights into how health literacy is defined and measured in current health literacy research and to examine the relationship between health literacy definitions and instruments.DesignSystematic review in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses statement.Data sourcesThe MEDLINE, PsycINFO, ERIC and CINAHL databases were searched for articles published during two randomly selected months (March and October) in 2019.Eligibility criteriaWe included articles with a quantitative design that measur…

Databases FactualdefinitionsInformation searchRHealth literacySystematic reviewsGeneral MedicineHealth researchHealth LiteracyMedicine researchVDP::Medisinske Fag: 700::Helsefag: 800:Medisinske Fag: 700 [VDP]instrumentsMedicineHumansHelsekompetansehealth literacy researchBMJ Open
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Exudate-based diabetic macular edema detection in fundus images using publicly available datasets

2010

International audience; Diabetic macular edema (DME) is a common vision threatening complication of diabetic retinopathy. In a large scale screening environment DME can be assessed by detecting exudates (a type of bright lesions) in fundus images. In this work, we introduce a new methodology for diagnosis of DME using a novel set of features based on colour, wavelet decomposition and automatic lesion segmentation. These features are employed to train a classifier able to automatically diagnose DME through the presence of exudation. We present a new publicly available dataset with ground-truth data containing 169 patients from various ethnic groups and levels of DME. This and other two publi…

Databases Factualgenetic structuresFeature extractionDiabetic macular edemaHealth Informatics02 engineering and technologySensitivity and SpecificityMacular Edema030218 nuclear medicine & medical imagingPattern Recognition Automated03 medical and health sciences0302 clinical medicineWavelet decompositionWaveletImage Interpretation Computer-Assisted[ INFO.INFO-TI ] Computer Science [cs]/Image Processing0202 electrical engineering electronic engineering information engineeringFalse positive paradoxMedicineHumansRadiology Nuclear Medicine and imagingComputer visionGround truthDiabetic RetinopathyRadiological and Ultrasound Technologybusiness.industryReproducibility of ResultsDiabetic retinopathyExudates and Transudatesmedicine.diseaseImage EnhancementComputer Graphics and Computer-Aided Designeye diseases[INFO.INFO-TI]Computer Science [cs]/Image Processing [eess.IV]020201 artificial intelligence & image processingComputer Vision and Pattern RecognitionArtificial intelligencebusinessClassifier (UML)AlgorithmsRetinoscopy
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An open-source computational and data resource to analyze digital maps of immunopeptidomes

2015

We present a novel mass spectrometry-based high-throughput workflow and an open-source computational and data resource to reproducibly identify and quantify HLA-associated peptides. Collectively, the resources support the generation of HLA allele-specific peptide assay libraries consisting of consensus fragment ion spectra, and the analysis of quantitative digital maps of HLA peptidomes generated from a range of biological sources by SWATH mass spectrometry (MS). This study represents the first community-based effort to develop a robust platform for the reproducible and quantitative measurement of the entire repertoire of peptides presented by HLA molecules, an essential step towards the de…

Databases FactualimmunopeptidomeQH301-705.5Systems biologyScienceImmunologyComputational biologyBiologyBioinformaticsMass spectrometryGeneral Biochemistry Genetics and Molecular BiologyMass Spectrometry03 medical and health sciencesResource (project management)Fragment (logic)HLA Antigenstargeted mass spectrometryHigh-Throughput Screening AssaysDIAhumanAntigenshuman leukocytes antigenBiology (General)030304 developmental biology0303 health sciencesAntigen PresentationGeneral Immunology and MicrobiologyDigital mappingGeneral Neuroscience030302 biochemistry & molecular biologyQRComputational BiologyGeneral Medicine3. Good healthTools and ResourcesHigh-Throughput Screening AssaysWorkflowTargeted mass spectrometrySWATH-MSMedicinePeptidesComputational and Systems BiologyeLife
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Narrow-diameter implants: A systematic review and meta-analysis.

2018

OBJECTIVES Narrow-diameter implants (NDI) are claimed to be a reasonable alternative to bone augmentation procedures. The aim of this comprehensive literature review was to conduct a meta-analysis comparing the implant survival of NDI and standard diameter implants (SDI) and to provide recommendations and guidelines for application of NDI. MATERIAL AND METHODS An extensive systematic literature search was performed in the PubMed/MEDLINE and the Cochrane Library databases. NDI were classified into Category 1 (implant diameter <3.0 mm, "mini-implants"), Category 2 (implant diameter 3-3.25 mm) and Category 3 (implant diameters 3.3-3.5 mm). Clinical studies at all levels of evidence with at lea…

Databases Factualmedicine.medical_treatmentMEDLINEAlveolar Bone LossDentistryMandibleCochrane LibraryBone augmentation03 medical and health sciences0302 clinical medicineAtrophic maxillamedicineMaxillaHumansDental Restoration FailureDental ImplantsRehabilitationbusiness.industryDental Implantation EndosseousInterdental consonant030206 dentistryAlveolar Ridge AugmentationSurvival AnalysisDental Prosthesis Design030220 oncology & carcinogenesisMeta-analysisImplantOral SurgerybusinessClinical oral implants research
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Medication-related osteonecrosis of the jaw associated with implant and regenerative treatments : systematic review

2019

Background The aim of this study was to determine if the treatment with bisphosphonates other anti-resorptive and antiangiogenic agents influences the success of regenerative and / or implant treatments. Material and Methods We reviewed the literature from the last 5 years in the PubMed database, using the following words: “Sinus Floor Augmentation”[Mesh] OR “Dental Implants”[Mesh]) OR “Guided Tissue Regeneration”[Mesh]) AND “Osteonecrosis”[Mesh]. The articles were selected following the inclusion and exclusion criteria and were evaluated using the 22 items of the STROBE declaration. The following PICO clinical question was applied: Does the treatment with agents associated with drug osteon…

Dental Restoration FailureSinus Floor AugmentationBone RegenerationDatabases FactualMEDLINESinus Floor AugmentationDentistryReviewRessenyes sistemàtiques (Investigació mèdica)law.invention03 medical and health sciences0302 clinical medicineRandomized controlled triallawSystematic reviews (Medical research)medicineOssosAnimalsHumansDental Restoration FailureMethodological qualityGeneral DentistryDental ImplantsBonesDiphosphonatesImplants dentalsbusiness.industryDental Implantation EndosseousDental implantsOsteonecrosisAntibodies Monoclonal030206 dentistryMedically compromised patients in Dentistrymedicine.disease:CIENCIAS MÉDICAS [UNESCO]OtorhinolaryngologyEfectes secundaris dels medicamentsInclusion and exclusion criteriaUNESCO::CIENCIAS MÉDICASDrug side effectsSurgeryImplantbusinessOsteonecrosis of the jawDrug Antagonism
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Dietary fiber and health outcomes: an umbrella review of systematic reviews and meta-analyses

2018

Background Several studies have suggested that higher consumption of dietary fiber is beneficial for a variety of health outcomes. However, many results have been inconclusive and, to our knowledge, there has been no attempt to systematically capture the breadth of outcomes associated with dietary fiber intake or to systematically assess the quality and the strength of the evidence on the associations of dietary fiber intake and different health outcomes or medical conditions. Objective The aim of this study was to describe the diverse health outcomes convincingly associated with dietary fiber consumption. Design This was an umbrella review of systematic reviews with meta-analysis of observ…

Dietary Fiber0301 basic medicinemedicine.medical_specialtyEvidence-based practiceDatabases FactualMedicine (miscellaneous)systemati reviewType 2 diabetesfiberscancer; cardiovascular disease; fibers; meta-analysis systemati review; Medicine (miscellaneous); Nutrition and DieteticsCoronary artery disease03 medical and health sciences0302 clinical medicineMeta-Analysis as Topiccardiovascular diseaseInternal medicinemedicinecancerHumans030212 general & internal medicineProspective cohort studyRandomized Controlled Trials as TopicInflammation030109 nutrition & dieteticsNutrition and Dieteticsbusiness.industryIncidencemedicine.diseaseDietmeta-analysisObservational Studies as TopicTreatment OutcomeSystematic reviewDiabetes Mellitus Type 2Cardiovascular Diseasescancer cardiovascular disease fibers meta-analysis systemati reviewMeta-analysisObservational Studies as TopicObservational studybusinessSystematic Reviews as TopicThe American Journal of Clinical Nutrition
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