Search results for "Fluorescence"

showing 10 items of 2463 documents

Calorimetric and structural investigation of the interaction between bovine serum albumin and high molecular weight dextran in water.

2005

This work studies specific interactions between a small globular protein and a highly flexible, branched polysaccharide using differential scanning calorimetry (DSC), circular dichroism (CD), fluorescence, and turbidimetry measurements. It uses the system water/bovine serum albumin (BSA)/dextran (D 2000) as a model. Dextran molecules are able to form interpolymeric complexes with BSA in water at both low and high temperatures if the polysaccharide is in excess and if the protein exists in its associated state. It leads to a partial destabilization of the secondary and tertiary structures of the protein and an additional exposure of the hydrophobic tryptophan residues to the surface of globu…

Circular dichroismProtein DenaturationProtein FoldingPolymers and PlasticsGlobular proteinMacromolecular SubstancesPolymersProtein ConformationUltraviolet RaysSerum albuminBioengineeringBiocompatible MaterialsCalorimetryProtein Structure SecondaryBiomaterialschemistry.chemical_compoundProtein structureNephelometry and TurbidimetryPolysaccharidesMaterials TestingMaterials ChemistryAnimalsBovine serum albuminchemistry.chemical_classificationChromatographybiologyCalorimetry Differential ScanningChemistryCircular DichroismTemperatureWaterDextransSerum Albumin BovineProtein Structure TertiaryDextranSpectrometry FluorescenceCalibrationbiology.proteinThermodynamicsProtein foldingCattleTurbidimetryBiomacromolecules
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A Comprehensive Spectroscopic Analysis of the Ibuprofen Binding with Human Serum Albumin, Part II

2021

Human serum albumin (HSA) is the most abundant human plasma protein. HSA plays a crucial role in many binding endos- and exogenous substances, which affects their pharmacological effect. The innovative aspect of the study is not only the interaction of fatted (HSA) and defatted (dHSA) human serum albumin with ibuprofen (IBU), but the analysis of the influence of temperature on the structural modifications of albumin and the interaction between the drug and proteins from the temperature characteristic of near hypothermia (308 K) to the temperature reflecting inflammation in the body (312 K and 314 K). Ibuprofen is a non-steroidal anti-inflammatory drug. IBU is used to relieve acute pain, inf…

Circular dichroismSerum albuminPharmaceutical ScienceFluorescence spectroscopy03 medical and health scienceschemistry.chemical_compoundPharmacy and materia medicamedicinespectrophotometricibuprofen030304 developmental biology0303 health sciencesChromatographybiologyChemistry030302 biochemistry & molecular biologyAlbuminIbuprofenHuman serum albuminFluorescencecircular dichroismRS1-441spectrofluorometrichuman serum albuminDHSAbiology.proteinmedicine.drugScientia Pharmaceutica
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Investigations of Chl a aggregates cross-linked by dioxane in 3-methylpentane

1997

In this work, dioxane-bound aggregates of chlorophyll a are prepared in 3-methylpentane. The properties of the aggregates are studied by using steady-state and time-resolved spectroscopies. The Q -region absorption spectrum of the y chlorophyll a-dioxane aggregate shows four clearly resolvable narrow bands with comparable intensities. The band maxima are located at 683, 689, 698 and 702 nm. The emission spectrum consists of two emission bands centred at 699 and 702 nm suggesting the presence of two types of aggregates. High degree of fluorescence polarization is detected yielding the angles between the absorption transition moments with respect to the 702 nm emission transition moment. The …

Circular dichroismSingle-photon countingAbsorption spectroscopyChlorophyll aTransition dipole momentBiophysicsAnalytical chemistry010402 general chemistry01 natural sciencesBiochemistryMolecular physicsDioxane aggregate03 medical and health sciencesFluorescence polarizationEmission spectrumAbsorption (electromagnetic radiation)030304 developmental biology0303 health sciencesChemistryCell Biology0104 chemical sciencesψ-type circular dichroismWavelengthExcitation delocalizationExcitationFluorescence anisotropyBiochimica et Biophysica Acta (BBA) - Bioenergetics
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Comparative biological evaluation and G-quadruplex interaction studies of two new families of organometallic gold(I) complexes featuring N-heterocycl…

2020

Experimental organometallic gold(I) compounds hold promise for anticancer therapy. This study reports the synthesis of two novel families of gold(I) complexes, including N1-substituted bis-N-heterocyclic carbene (NHC) complexes of general formula [Au(N1-TBM) 2]BF 4 (N1-TBM = N1-substituted 9-methyltheobromin-8-ylidene) and mixed gold(I) NHC-alkynyl complexes, [Au(N1-TBM)alkynyl]. The compounds were fully characterised for their structure and stability in aqueous environment and in the presence of N-acetyl cysteine by nuclear magnetic resonance (NMR) spectroscopy. The structures of bis(1-ethyl-3,7,9-trimethylxanthin-8-ylidene)gold(I), (4-ethynylpyridine)(1,9-dimethyltheobromine-8-ylidene)gol…

Circular dichroismStereochemistryAntineoplastic Agents010402 general chemistryG-quadruplexLigands01 natural sciencesBiochemistryInorganic Chemistrychemistry.chemical_compoundNeoplasmsMoietyGold(I) organometallicsHumansN-heterocyclic carbenesCancer010405 organic chemistryChemistryFluorescenceG-quadruplexes0104 chemical sciencesFörster resonance energy transferMCF-7 CellsBODIPYDrug Screening Assays AntitumorSelectivityCarbeneAlkynyl ligandsMethaneOrganogold Compounds
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Environment- and sequence-dependent modulation of the double-stranded to single-stranded conformational transition of gramicidin A in membranes.

1998

The role of the membrane lipid composition and the individual Trp residues in the conformational rearrangement of gramicidin A along the folding pathway to its channel conformation has been examined in phospholipid bilayers by means of previously described size-exclusion high-performance liquid chromatography HPLC-based strategy (Bano et al. (1991) Biochemistry 30, 886). It has been demonstrated that the chemical composition of the membrane influences the transition rate of the peptide rearrangement from double-stranded dimers to beta-helical monomers. The chemical modification of Trp residues, or its substitution by the more hydrophobic residues phenylalanine or naphthylalanine, stabilized…

Circular dichroismStereochemistryProtein ConformationDimerPhenylalanineEnterococcus faeciumLipid BilayersMolecular Sequence DataPeptideMicrobial Sensitivity TestsBiochemistrychemistry.chemical_compoundProtein structureAmino Acid SequencePeptide sequenceChromatography High Pressure Liquidchemistry.chemical_classificationChemistryCholestenesCircular DichroismGramicidinTryptophanFolding (chemistry)MembraneSpectrometry FluorescenceAmino Acid SubstitutionGramicidinFatty Acids UnsaturatedPhosphatidylcholinesDimerizationBiochemistry
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Forever Young: Structural Stability of Telomeric Guanine Quadruplexes in the Presence of Oxidative DNA Lesions**

2021

International audience; Human telomeric DNA, in G-quadruplex (G4) conformation, is characterized by a remarkable structural stability that confers it the capacity to resist to oxidative stress producing one or even clustered 8-oxoguanine (8oxoG) lesions. We present a combined experimental/computational investigation, by using circular dichroism in aqueous solutions, cellular immunofluorescence assays and molecular dynamics simulations, that identifies the crucial role of the stability of G4s to oxidative lesions, related also to their biological role as inhibitors of telomerase, an enzyme overexpressed in most cancers associated to oxidative stress.

Circular dichroismTelomeraseOxidative phosphorylation010402 general chemistryImmunofluorescencemedicine.disease_cause01 natural scienceselectronic circular dichroismCatalysis[SPI.AUTO]Engineering Sciences [physics]/Automaticchemistry.chemical_compoundmedicineHumansimmunofluorescenceTelomerasechemistry.chemical_classificationmedicine.diagnostic_test010405 organic chemistryCircular DichroismOrganic ChemistryDNAGeneral ChemistryTelomeremolecular dynamics0104 chemical sciences3. Good healthG-QuadruplexesOxidative StressEnzymeBiochemistrychemistrySettore CHIM/03 - Chimica Generale E InorganicaGuanine quadruplexesNucleic Acid Conformationoxidative DNA lesionsGuanine-QuadruplexesDNAOxidative stress
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Cloning, purification, and nucleotide-binding traits of the catalytic subunit A of the V1VO ATPase from Aedes albopictus.

2007

The Asian tiger mosquito, Aedes albopictus, is commonly infected by the gregarine parasite Ascogregarina taiwanensis, which develops extracellularly in the midgut of infected larvae. The intracellular trophozoites are usually confined within a parasitophorous vacuole, whose acidification is generated and controlled by the V(1)V(O) ATPase. This proton pump is driven by ATP hydrolysis, catalyzed inside the major subunit A. The subunit A encoding gene of the Aedes albopictus V(1)V(O) ATPase was cloned in pET9d1-His(3) and the recombinant protein, expressed in the Escherichia coli Rosetta 2 (DE3) strain, purified by immobilized metal affinity- and ion-exchange chromatography. The purified prote…

Circular dichroismVacuolar Proton-Translocating ATPasesATPaseProtein subunitGene ExpressionGenes InsectBiologyIn Vitro Techniquesmedicine.disease_causelaw.inventionAdenosine TriphosphateATP hydrolysislawAedesCatalytic DomainmedicineAnimalsNucleotideCloning MolecularEscherichia coliDNA Primerschemistry.chemical_classificationPhotoaffinity labelingBase SequenceMolecular biologyProtein SubunitsSpectrometry FluorescenceBiochemistrychemistrySpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationbiology.proteinRecombinant DNAInsect ProteinsBiotechnologyProtein expression and purification
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Isolation and characterization of haemoporin, an abundant haemolymph protein from Aplysia californica.

2003

In the present study, we show the isolation and characterization of the protein haemoporin, which constitutes the second most abundant protein fraction in the haemolymph of the marine gastropod Aplysia californica. Although Aplysia is commonly used to investigate the molecular basis of learning, not much is known about the proteins in its haemolymph, which is in contact with the neurons owing to the open circulatory system of molluscs. In the native state, haemoporin is a macromolecular complex forming a cylinder with a central solvent-filled pore. The native complex most probably is a homopentamer made up from 70 kDa subunits with a molecular mass of 360 kDa and a sedimentation coefficient…

Circular dichroismanimal structuresMolecular Sequence DataMegathura crenulataBiochemistrySequence Analysis ProteinHemolymphHemolymphAplysiaNative stateAnimalsAmino Acid SequenceMolecular BiologyProtein secondary structurebiologyMolecular massCircular DichroismCell BiologyAnatomyBlood Proteinsbiology.organism_classificationMolecular WeightMicroscopy ElectronSpectrometry FluorescenceBiochemistryAplysiaProtein quaternary structureElectrophoresis Polyacrylamide GelUltracentrifugationResearch ArticleThe Biochemical journal
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Specific interaction of citrate with bis(fluorophoric) bibrachial lariat aza-crown in comparison with the other components of the Krebs cycle

2006

Clares Garcia, M. Paz, M.Paz.Clares@uv.es ; Garcia-España Monsonis, Enrique, Enrique.Garcia-Es@uv.es ; Soriano Soto, Concepcion, Concepcion.Soriano@uv.es ; Tejero Toquero, Roberto, Roberto.Tejero@uv.es

Citrate ; Krebs cycle ; Fluorescence ; NaphthaleneUNESCO::QUÍMICACrown (botany)UNESCO::QUÍMICA::Química analíticaMetals and AlloysGeneral ChemistryFluorescenceMedicinal chemistry:QUÍMICA [UNESCO]CatalysisFluorescenceSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsCitric acid cyclechemistry.chemical_compoundchemistryBiochemistryMaterials ChemistryCeramics and Composites:QUÍMICA::Química analítica [UNESCO]CitrateKrebs cycleThe Krebs CycleNaphthaleneNaphthalene
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Organelle pH studies using targeted avidin and fluorescein–biotin

2000

Abstract Background: Mammalian organelles of the secretory pathway are of differing pH. The pH values form a decreasing gradient: the endoplasmic reticulum (ER) is nearly neutral, the Golgi is mildly acidic and the secretory granules are more acidic still (∼pH 5). The mechanisms that regulate pH in these organelles are still unknown. Results: Using a novel method, we tested whether differences in H + ‘leak' and/or counterion conductances contributed to the pH difference between two secretory pathway organelles. A pH-sensitive, membrane-permeable fluorescein–biotin was targeted to endoplasmic-reticulum- and Golgi-localized avidin-chimera proteins in HeLa cells. In live, intact cells, ER pH (…

Clinical BiochemistryBiotinGolgi ApparatusEndoplasmic ReticulumBiochemistrysymbols.namesakechemistry.chemical_compoundChloridesBiotinOrganelleDrug DiscoveryHumansMicroscopy ImmunoelectronMolecular BiologySecretory pathwayFluorescent DyesOrganellesPharmacologyIon TransportFlubi-2ChemistryEndoplasmic reticulumBafilomycinIntracellular MembranesGeneral MedicineHydrogen-Ion ConcentrationProton PumpsGolgi apparatusAvidinCytosolTargeted fluorescenceMembraneBiochemistryH+ pumpPotassiumsymbolsMolecular MedicineFluoresceinHeLa CellsH+ leakChemistry & Biology
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