Search results for "Forme"

showing 10 items of 1192 documents

Noise elicits hematological stress parameters in Mediterranean damselfish (Chromis chromis, perciformes): A mesocosm study

2017

In the last few decades, technological developments and the widespread rise of anthropic activities have increased the exposure of organisms to noise pollution, thus evoking great interest in its biological effects, particularly on the immune system. The aim of the present work was to investigate some of the biochemical parameters in the blood of Chromis chromis (Linnaeus, 1758) following in vivo exposure to noise levels of 200 and 300 Hz. Our results revealed that, compared to the control specimens, the fish exposed to noise had significantly increased levels of stress biomarkers such as glucose, lactate and total proteins in plasma, as well as a rise in the expression of heat shock protei…

0106 biological sciences0301 basic medicineMediterranean climateBlood GlucoseStreZoologyAquatic Science01 natural sciencesPerciformesMesocosm03 medical and health sciencesRandom AllocationBlood ProteinNoise pollutionStress PhysiologicalAnimalsEnvironmental ChemistryHSP70 Heat-Shock ProteinsLactic AcidDamselfishPerciformeHSP70HSP70 Heat-Shock ProteinbiologyNoise pollutionEcologyAnimal010604 marine biology & hydrobiologyAquatic animalGeneral MedicineBlood Proteinsbiology.organism_classificationChromis chromisHsp70Perciformes030104 developmental biologyBloodChromis chromiNoise
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The role of the Strait of Gibraltar in shaping the genetic structure of the Mediterranean Grenadier, Coryphaenoides mediterraneus, between the Atlant…

2017

24 pages, 4 figures, 4 tables, supplementary information https://dx.doi.org/10.1371/journal.pone.0174988.-- Data Availability: The mtDNA COI sequences can be accessed at BOLD systems through the sample ID: ME-9911; ME-11972; ME-13727; GLF011. New mtDNA COI sequences can be accessed at GenBank by the accession numbers KY345206 - KY345398. GenBank accession numbers for close related species of C. mediterraneus are: Coryphaenoides striaturus - KX656427.1, KX656428.1; Coryphaenoides murray - KX656411.1, KX656410.1; Coryphaenoides carapinus - KX656382.1, KX656381.1; Coryphaenoides brevibarbis - KX656377.1, KX656376.1, KX656375.1. An alignment in fasta with all the haplotypes and respective frequ…

0106 biological sciences0301 basic medicineMediterranean climateLife CyclesHeredityPopulation geneticslcsh:MedicineArtificial Gene Amplification and ExtensionBiochemistryPolymerase Chain Reaction01 natural sciencesBathyal zoneLarvaeMediterranean sealcsh:ScienceAtlantic OceanPrincipal Component Analysiseducation.field_of_studyMultidisciplinaryGeographyMitochondrial DNANucleic acidsGenetic MappingGenetic structureResearch ArticleFish ProteinsGene FlowForms of DNAPopulationZoologyBiologyResearch and Analysis MethodsModels Biological010603 evolutionary biologyElectron Transport Complex IVEvolution Molecular03 medical and health sciencesMediterranean SeaGeneticsAnimalsComputer Simulation14. Life underwaterMolecular Biology TechniqueseducationMolecular BiologyGibraltarEvolutionary BiologyPopulation Biologylcsh:RGenetic VariationBiology and Life SciencesPaleontologyBayes TheoremDNAGenetic divergenceGadiformes030104 developmental biologyHaplotypesGenetic LociEarth SciencesBiological dispersallcsh:QPaleogeneticsPopulation GeneticsMicrosatellite RepeatsDevelopmental BiologyPLoS ONE
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Effects of plant density and cutting-type on rooting and growth of an extensive green roof of Sedum sediforme (Jacq.) Pau in a Mediterranean environm…

2020

Abstract Species of the Sedum genus are a popular choice for green roofs as they thrive in shallow growth layers and are resilient to extreme environmental conditions; they are also easy to propagate from seed, plantlings or plant parts. The use of rooted cuttings is most widespread due to good rates of establishment. In the interest of cost reduction, the direct spreading of Sedum cuttings over the roof area, especially over large areas, has attracted attention in recent years. Considering the interest on the above method and the seeming lack of experimental data available, this study aims to further knowledge in this area. Experimental tests on direct spreading of unrooted cuttings of Sed…

0106 biological sciences0301 basic medicineMediterranean climateVegetative reproductionGreen roofHorticultureSedum sediformeCrassulaceae01 natural sciences03 medical and health sciencesCuttingground coverVegetative propagationunrooted cuttingRoofSicilybiologybiology.organism_classificationSedumSettore AGR/02 - Agronomia E Coltivazioni ErbaceeSedum sediforme (Jacq.) Pau030104 developmental biologyAgronomyDirect spreadingPlant coverEnvironmental science010606 plant biology & botany
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An exhaustive phylogeny of the combtooth blenny genus Salaria (Pisces, Blenniidae) shows introgressive hybridization and lack of reciprocal mtDNA mon…

2019

A comprehensive phylogeny of the genus Salaria based on mitochondrial and nuclear markers grouped the extant species of the genus in well-characterised marine and freshwater clades, thus rejecting the hypothesis of a polytypic origin of the freshwater Salaria populations and supporting the occurrence of a single invasion event of the inland waters by the genus. Based on both mitochondrial and nuclear DNA datasets, the Salaria species of the freshwater clade proved to be vicariant taxa originating from a common ancestor which could possibly spread throughout the circum-Mediterranean inland waters during the late Miocene Messinian salinity crisis, then experiencing a process of allopatric dif…

0106 biological sciences0301 basic medicineSalariaAquatic OrganismsMito-nuclear discordance Speciation without monophyly Introgressive hybridization Asymmetrical mtDNA introgressionCombtooth blennySettore BIO/05 - ZoologiaAllopatric speciation010603 evolutionary biology01 natural sciencesDNA barcodingDNA MitochondrialEvolution Molecular03 medical and health sciencesMonophylySpecies SpecificityGenusAsymmetrical mtDNA introgressionGeneticsAnimalsCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyCell NucleusbiologyPhylogenetic treeGeographyBayes Theorembiology.organism_classificationIntrogressive hybridizationMitochondriaPerciformesSpeciation without monophyly030104 developmental biologyHaplotypesEvolutionary biologyHybridization GeneticMito-nuclear discordanceMolecular phylogenetics and evolution
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Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
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Is the ballan wrasse (Labrus bergylta) two species? Genetic analysis reveals within-species divergence associated with plain and spotted morphotype f…

2016

Abstract The ballan wrasse (Labrus bergylta) is a marine fish belonging to the family Labridae characterized by 2 main morphotypes that occur in sympatry: spotty and plain. Previous studies have revealed differences in their life‐history traits, such as growth and maturation; however, the genetic relationship between forms is presently unknown. Using 20 recently developed microsatellite markers, we conducted a genetic analysis of 41 and 48 spotty and plain ballan wrasse collected in Galicia (northwest Spain). The 2 morphotypes displayed highly significant genetic differences to each other (F ST = 0.018, P < 0.0001). A similar degree of genetic differentiation (F ST = 0.025, P < 0.0001) was …

0106 biological sciences0301 basic medicineSympatryballan wrasseShort CommunicationZoologyGenetic relationshipLabrus bergyltaDNA Mitochondrial010603 evolutionary biology01 natural sciencesGenetic analysismicrosatellitesPerciformes03 medical and health sciencesAnimalsbiologyGenetic heterogeneitycolor morphotypesSequence Analysis DNALabrus bergyltabiology.organism_classificationPerciformesSympatry030104 developmental biologyspeciationSpainWrasseMicrosatelliteAnimal Science and ZoologyMicrosatellite RepeatsIntegrative Zoology
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Improved sampling at the subspecies level solves a taxonomic dilemma – A case study of two enigmatic Chinese tit species (Aves, Passeriformes, Parida…

2017

Abstract A recent full species-level phylogeny of tits, titmice and chickadees (Paridae) has placed the Chinese endemic black-bibbed tit (Poecile hypermelaenus) as the sister to the Palearctic willow tit (P. montanus). Because this sister-group relationship is in striking disagreement with the traditional affiliation of P. hypermelaenus close to the marsh tit (P. palustris) we tested this phylogenetic hypothesis in a multi-locus analysis with an extended taxon sampling including sixteen subspecies of willow tits and marsh tits. As a taxonomic reference we included type specimens in our analysis. The molecular genetic study was complemented with an analysis of biometric data obtained from mu…

0106 biological sciences0301 basic medicineSystematicsChinaZoologySubspeciesDNA Mitochondrial010603 evolutionary biology01 natural sciences03 medical and health sciencesSpecies SpecificityWillow titGeneticsAnimalsDNA Barcoding TaxonomicPasseriformesMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsbiologyPhylogenetic treebiology.organism_classificationPoecile hypermelaenusPhylogeography030104 developmental biologyTaxonGenetic LociPoecileTaxonomy (biology)Molecular Phylogenetics and Evolution
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The effects of drainage and restoration of pine mires on habitat structure, vegetation and ants

2016

Habitat loss and degradation are the main threats to biodiversity worldwide. For example, nearly 80% of peatlands in southern Finland have been drained. There is thus a need to safeguard the remaining pristine mires and to restore degraded ones. Ants play a pivotal role in many ecosystems and like many keystone plant species, shape ecosystem conditions for other biota. The effects of mire restoration and subsequent vegetation succession on ants, however, are poorly understood. We inventoried tree stands, vegetation, water-table level, and ants (with pitfall traps) in nine mires in southern Finland to explore differences in habitats, vegetation and ant assemblages among pristine, drained (30…

0106 biological sciencesAichi Biodiversity Target 15PeatFORMICA-AQUILONIAta1172ecological restorationpine bogs and fens010603 evolutionary biology01 natural sciencesMiretransforming and transformed drained miresBOREAL FORESTSlcsh:ForestryditchingBogRestoration ecologyFormicidae4112 Forestrygeography.geographical_feature_categoryAgroforestryEcologyEcological ModelingASSEMBLY RULESEXTINCTION DEBTForestryVegetation15. Life on land010602 entomologywater-table levelGeographyHabitat destructionTree standBOGSWATER-LEVELlcsh:SD1-669.5ta1181COMMUNITIESSOUTHERN FINLANDWOOD ANTSExtinction debt
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An integrated analysis of micro- and macro-habitat features as a tool to detect weather-driven constraints: A case study with cavity nesters.

2017

The effects of climate change on animal populations may be shaped by habitat characteristics at both micro- and macro-habitat level, however, empirical studies integrating these two scales of observation are lacking. As analyses of the effects of climate change commonly rely on data from a much larger scale than the microhabitat level organisms are affected at, this mismatch risks hampering progress in developing understanding of the details of the ecological and evolutionary responses of organisms and, ultimately, effective actions to preserve their populations. Cavity nesters, often with a conservation status of concern, are an ideal model because the cavity is a microenvironment potentia…

0106 biological sciencesAtmospheric ScienceResearch FacilitiesPhysiologyOvipositionlcsh:MedicineKestrelMedicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)01 natural sciencesGlobal Warming010605 ornithologyNesting BehaviorGeographical LocationsNestReproductive PhysiologyMedicine and Health SciencesNatural Selectionlcsh:ScienceAbiotic componentClimatologyeducation.field_of_studyMultidisciplinaryBiotic componentbiologyAnimal BehaviorEcologyMedicine (all)Falco naumanniEuropeHabitatItalyVertebratesClutchesResearch ArticleEvolutionary ProcessesClimate ChangePopulationAnimal Sexual BehaviorResearch and Analysis MethodsWeather Stations010603 evolutionary biologyBirdsAnimalseducationWeatherEcosystemFalconiformesAnalysis of VarianceBehaviorEvolutionary BiologyBiochemistry Genetics and Molecular Biology (all)Reproductive successlcsh:REndangered SpeciesOrganismsBiology and Life SciencesModels Theoreticalbiology.organism_classificationReproductive SuccessAgricultural and Biological Sciences (all)AmniotesPeople and PlacesLinear ModelsEarth Scienceslcsh:QZoologyPloS one
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Geographical variation in egg mass and egg content in a passerine bird

2011

Reproductive, phenotypic and life-history traits in many animal and plant taxa show geographic variation, indicating spatial variation in selection regimes. Maternal deposition to avian eggs, such as hormones, antibodies and antioxidants, critically affect development of the offspring, with long-lasting effects on the phenotype and fitness. Little is however known about large-scale geographical patterns of variation in maternal deposition to eggs. We studied geographical variation in egg components of a passerine bird, the pied flycatcher (Ficedula hypoleuca), by collecting samples from 16 populations and measuring egg and yolk mass, albumen lysozyme activity, yolk immunoglobulins, yolk and…

0106 biological sciencesAvian clutch sizeAnimal sexual behaviourlcsh:MedicineBreeding01 natural sciencesOrnithologyPasseriformeslcsh:SciencePhysiological EcologyCarotenoidFLYCATCHER FICEDULA-HYPOLEUCAchemistry.chemical_classification0303 health scienceseducation.field_of_studyMultidisciplinaryEcologyGeographybiologyBARN SWALLOW EGGSEcologyPasserinePhenotype1181 Ecology evolutionary biologyembryonic structuresCOLLARED FLYCATCHERPARENTAL QUALITYResearch ArticleCLUTCH-SIZEfood.ingredientPIED FLYCATCHERPopulationZoology010603 evolutionary biologyEvolution Molecular03 medical and health sciencesQH301foodYolkbiology.animalAnimalsTIT PARUS-MAJORYOLK STEROID-LEVELSLATITUDINAL VARIATIONSelection GeneticeducationBiologyOvum030304 developmental biologyLocal adaptationQHlcsh:RFicedulaLAYING ORDERbiology.organism_classificationchemistryEvolutionary Ecologyta1181lcsh:QPopulation EcologyGenetic FitnessZoology
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