Search results for "GENETICS"

showing 10 items of 12494 documents

Combining molecular microbial ecology with ecophysiology and plant genetics for a better understanding of plant-microbial communities' interactions i…

2013

18 pages; International audience

0106 biological sciencesEcophysiologyquantitative geneticsecophysiologyPlant genetics[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study01 natural sciences03 medical and health sciencesplant–microbes interactionsMicrobial ecologyBotany[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hunger0303 health sciencesRhizosphere[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologymodelingQuantitative geneticsMicrobial population biology[SDE.BE]Environmental Sciences/Biodiversity and Ecologymicrobial communityrhizosphere010606 plant biology & botany[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Multiple‐batch spawning as a bet‐hedging strategy in highly stochastic environments: An exploratory analysis of Atlantic cod

2021

Stochastic environments shape life‐history traits and can promote selection for risk‐spreading strategies, such as bet‐hedging. Although the strategy has often been hypothesised to exist for various species, empirical tests providing firm evidence have been rare, mainly due to the challenge in tracking fitness across generations. Here, we take a ‘proof of principle’ approach to explore whether the reproductive strategy of multiple‐batch spawning constitutes a bet‐hedging. We used Atlantic cod (Gadus morhua) as the study species and parameterised an eco‐evolutionary model, using empirical data on size‐related reproductive and survival traits. To evaluate the fitness benefits of multiple‐batc…

0106 biological sciencesEmpirical dataEvolutionReproductive strategyBiology010603 evolutionary biology01 natural sciencesrisk‐spreadingturskaEnvironmental riskGeneticsQH359-425Gadus14. Life underwaterEcology Evolution Behavior and SystematicsSelection (genetic algorithm)VDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920kuntosopeutuminenlisääntymiskäyttäytyminenEcology010604 marine biology & hydrobiologyOriginal ArticlesExploratory analysisbiology.organism_classificationlisääntyminenfitnesselinkiertomultiple‐batch spawningAtlantic codTraitOriginal Articlebet‐hedgingGeneral Agricultural and Biological SciencesAtlantic codenvironmental stochasticityympäristönmuutoksetEvolutionary Applications
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ABP1 Mediates Auxin Inhibition of Clathrin-Dependent Endocytosis in Arabidopsis

2010

SummarySpatial distribution of the plant hormone auxin regulates multiple aspects of plant development. These self-regulating auxin gradients are established by the action of PIN auxin transporters, whose activity is regulated by their constitutive cycling between the plasma membrane and endosomes. Here, we show that auxin signaling by the auxin receptor AUXIN-BINDING PROTEIN 1 (ABP1) inhibits the clathrin-mediated internalization of PIN proteins. ABP1 acts as a positive factor in clathrin recruitment to the plasma membrane, thereby promoting endocytosis. Auxin binding to ABP1 interferes with this action and leads to the inhibition of clathrin-mediated endocytosis. Our study demonstrates th…

0106 biological sciencesEndosomemedia_common.quotation_subjectArabidopsisReceptors Cell SurfaceEndocytosis01 natural sciencesClathrinGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesAuxinheterocyclic compoundsPIN proteinsInternalization030304 developmental biologymedia_commonPlant Proteinschemistry.chemical_classificationAuxin binding0303 health sciencesbiologyIndoleacetic AcidsBiochemistry Genetics and Molecular Biology(all)Arabidopsis ProteinsCell MembranefungiMembrane Transport Proteinsfood and beveragesReceptor-mediated endocytosisClathrinEndocytosisCell biologychemistrybiology.protein010606 plant biology & botanyCell
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Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study

2009

AbstractBackgroundIn the mega-diverse insect order Lepidoptera (butterflies and moths; 165,000 described species), deeper relationships are little understood within the clade Ditrysia, to which 98% of the species belong. To begin addressing this problem, we tested the ability of five protein-coding nuclear genes (6.7 kb total), and character subsets therein, to resolve relationships among 123 species representing 27 (of 33) superfamilies and 55 (of 100) families of Ditrysia under maximum likelihood analysis.ResultsOur trees show broad concordance with previous morphological hypotheses of ditrysian phylogeny, although most relationships among superfamilies are weakly supported. There are als…

0106 biological sciencesEntomologyNuclear geneUNESCO::CIENCIAS DE LA VIDA::Biología animal (Zoología) ::InvertebradosEvolutionmedia_common.quotation_subjectInitial molecular studyZoologyInsect010603 evolutionary biology01 natural sciencesProtein-coding nuclear genesLepidoptera genitaliaLepidoptera; Protein-coding nuclear genes; Initial molecular study03 medical and health sciencesDitrysiaPhylogenetics:CIENCIAS DE LA VIDA::Biología animal (Zoología) ::Invertebrados [UNESCO]Research articleQH359-425AnimalsCladeEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biologymedia_common0303 health sciencesbiologyBayes TheoremSequence Analysis DNAbiology.organism_classificationBiological EvolutionLepidopteraEvolutionary biologyBombycoideaBMC Evolutionary Biology
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Genetic and phenotypic variation of the malaria vector Anopheles atroparvus in southern Europe

2011

Abstract Background There is a growing concern that global climate change will affect the potential for pathogen transmission by insect species that are vectors of human diseases. One of these species is the former European malaria vector, Anopheles atroparvus. Levels of population differentiation of An. atroparvus from southern Europe were characterized as a first attempt to elucidate patterns of population structure of this former malaria vector. Results are discussed in light of a hypothetical situation of re-establishment of malaria transmission. Methods Genetic and phenotypic variation was analysed in nine mosquito samples collected from five European countries, using eight microsatell…

0106 biological sciencesEntomologylcsh:Arctic medicine. Tropical medicinelcsh:RC955-962PopulationBiology010603 evolutionary biology01 natural sciencesGene flowlcsh:Infectious and parasitic diseases03 medical and health sciencesSDG 3 - Good Health and Well-beingAnophelesGenetic variationGeneticsSDG 13 - Climate ActionAnimalsWings Animallcsh:RC109-216educationEcology Evolution Behavior and Systematics030304 developmental biologySDG 15 - Life on LandMorphometrics0303 health scienceseducation.field_of_studyGenetic diversity[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]GeographyResearchAnophelesGenetic Variationbiology.organism_classification3. Good healthEurope[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsInfectious DiseasesEvolutionary biologyInsect ScienceMicrosatelliteParasitologyMicrosatellite RepeatsMalaria Journal
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Sodium provides unique insights into transgenerational effects of ocean acidification on bivalve shell formation

2016

Abstract Ocean acidification is likely to have profound impacts on marine bivalves, especially on their early life stages. Therefore, it is imperative to know whether and to what extent bivalves will be able to acclimate or adapt to an acidifying ocean over multiple generations. Here, we show that reduced seawater pH projected for the end of this century (i.e., pH 7.7) led to a significant decrease of shell production of newly settled juvenile Manila clams, Ruditapes philippinarum. However, juveniles from parents exposed to low pH grew significantly faster than those from parents grown at ambient pH, exhibiting a rapid transgenerational acclimation to an acidic environment. The sodium compo…

0106 biological sciencesEnvironmental Engineering010504 meteorology & atmospheric sciencesEcology010604 marine biology & hydrobiologySodiumchemistry.chemical_elementOcean acidificationRuditapesBiologybiology.organism_classification01 natural sciencesPollutionAcclimatizationTransgenerational epigeneticschemistryEnvironmental ChemistrySeawaterBivalve shellWaste Management and DisposalHomeostasis0105 earth and related environmental sciencesScience of The Total Environment
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Modularity as a source of new morphological variation in the mandible of hybrid mice.

2012

Abstract Background Hybridization is often seen as a process dampening phenotypic differences accumulated between diverging evolutionary units. For a complex trait comprising several relatively independent modules, hybridization may however simply generate new phenotypes, by combining into a new mosaic modules inherited from each parental groups and parts intermediate with respect to the parental groups. We tested this hypothesis by studying mandible size and shape in a set of first and second generation hybrids resulting from inbred wild-derived laboratory strains documenting two subspecies of house mice, Musmusculus domesticus and Musmusculus musculus. Phenotypic variation of the mandible…

0106 biological sciencesEvolutionMandible[SDV.BID]Life Sciences [q-bio]/BiodiversityModels Biological010603 evolutionary biology01 natural sciencesHouse mouse[ SDV.BDD.MOR ] Life Sciences [q-bio]/Development Biology/MorphogenesisMandible (arthropod mouthpart)Mice03 medical and health sciencesQH359-425AnimalsBody SizeMus musculusMandible shapeTransgressive phenotypesHybridizationEcology Evolution Behavior and Systematics030304 developmental biologyHybridGenetics[ SDV.BID ] Life Sciences [q-bio]/Biodiversity0303 health sciencesModularity (networks)Geometric morphometricsbiology[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesisbiology.organism_classification<it>Mus musculus</it>PhenotypeHouse mouseEvolutionary biologyTraitHybridization GeneticHouse miceTransgressiveResearch Article
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Enforced monoandry over generations induces a reduction of female investment into reproduction in a promiscuous bird.

2021

Abstract While uncovering the costs and benefits of polyandry has attracted considerable attention, assessing the net effect of sexual selection on population fitness requires the experimental manipulation of female mating over generations, which is usually only achievable in laboratory populations of arthropods. However, knowing if sexual selection improves or impairs the expression of life‐history traits is key for the management of captive populations of endangered species, which are mostly long‐lived birds and mammals. It might therefore be questionable to extrapolate the results gathered on laboratory populations of insects to infer the net effect of sexual selection on populations of …

0106 biological sciencesEvolutionNatural resource economicsfemale multiple matingpolyandryReproduction (economics)[SDV]Life Sciences [q-bio]Biology010603 evolutionary biology01 natural sciencesReduction (complexity)03 medical and health sciencesQH359-425Geneticsreproductive investmentEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencespostcopulatory sexual selectionex situ conservationOriginal Articles15. Life on landEx situ conservationInvestment (macroeconomics)Original ArticleGeneral Agricultural and Biological SciencesEvolutionary applications
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Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Mycelial development of Fusarium oxysporum in the vicinity of tomato roots

1999

The patterns of mycelial development (length and branching) of five strains of Fusarium oxysporum were measured in the vicinity of tomato and wheat roots. Two strains were of f. sp. lycopersici, two of f. sp. radicis-lycopersici and the fifth was a non-pathogenic strain currently used as a biocontrol agent. Hyphal extension and branching were measured microscopically using a CCD camera and an image analyser. Furthermore, the role of soluble root exudates, insoluble root materials, glucose supply, and nitrogen supply (casamino acids) on mycelial development was investigated. Each strain had its own pattern of development in the absence of a root. Fungal development of all five strains was st…

0106 biological sciencesExudateHyphaBiological pest controlPlant Science01 natural sciences03 medical and health sciencesBotanyFusarium oxysporumGeneticsmedicineEcology Evolution Behavior and SystematicsMyceliumComputingMilieux_MISCELLANEOUS[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/Mycology030304 developmental biology0303 health sciencesRhizospherebiologyfood and beveragesFungi imperfectibiology.organism_classification[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/Mycologymedicine.symptomSolanaceae010606 plant biology & botanyBiotechnology
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