Search results for "GENETICS"

showing 10 items of 12494 documents

Evolutionary Changes after Translational Challenges Imposed by Horizontal Gene Transfer

2019

International audience; Genes acquired by horizontal gene transfer (HGT) may provide the recipient organism with potentially new functions, but proper expression level and integration of the transferred genes in the novel environment are not granted. Notably, transferred genes can differ from the receiving genome in codon usage preferences, leading to impaired translation and reduced functionality. Here, we characterize the genomic and proteomic changes undergone during experimental evolution of Escherichia coli after HGT of three synonymous versions, presenting very different codon usage preference, of an antibiotic resistance gene. The experimental evolution was conducted with and without…

0106 biological sciencesantibiotic resistanceGene Transfer HorizontalProteome[SDV]Life Sciences [q-bio]Bacterial genome sizeBiology010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciences[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Drug Resistance BacterialEscherichia coliGeneticsexperimental evolutionGeneEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesExperimental evolution[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]compensatory evolutionGenomicsPhenotype[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriologycodon usage preferencesGenòmicaGenesCodon usage biasHorizontal gene transferProteomehorizontal gene transferResearch ArticleGens
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Negative associations between parasite avoidance, resistance and tolerance predict host health in salmonid fish populations

2020

Genetic variation in defence against parasite infections is fundamental for host–parasite evolution. The overall level of defence of a host individual or population includes mechanisms that reduce parasite exposure (avoidance), establishment (resistance) or pathogenicity (tolerance). However, how these traits operate and evolve in concert is not well understood. Here, we investigated genetic variation in and associations between avoidance, resistance and tolerance in a natural host–parasite system. Replicated populations of Atlantic salmon ( Salmo salar ) and sea trout (an anadromous form of brown trout, Salmo trutta ) were raised under common garden conditions and infected with the eye fl…

0106 biological sciencesavoidancehost defenceEvolutionTroutSalmo salarPopulationZoologyparasitismiSalmonid fishBiologyTrade-off010603 evolutionary biology01 natural scienceseläinten käyttäytyminenGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite InteractionsresistanceFish Diseases03 medical and health sciencespopulaatiotloisetGenetic variationisäntäeläimetAnimalsParasite hostingParasitesParasite Infections14. Life underwatereducation030304 developmental biologyGeneral Environmental Sciencetrade-offsietokyky0303 health scienceseducation.field_of_studytoleranceGeneral Immunology and MicrobiologyResistance (ecology)Host (biology)imumadotlohikalatGeneral Medicinetrematode parasitegeneettinen muunteluresistenssiTrematodaGeneral Agricultural and Biological Sciences
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Determining stingray movement patterns in a wave-swept coastal zone using a blimp for continuous aerial video surveillance

2020

Stingrays play a key role in the regulation of nearshore ecosystems. However, their movement ecology in high-energy surf areas remains largely unknown due to the notorious difficulties in conducting research in these environments. Using a blimp as an aerial platform for video surveillance, we overcame some of the limitations of other tracking methods, such as the use of tags and drones. This novel technology offered near-continuous coverage to characterise the fine-scale movements of stingrays in a surf area in Kiama, Australia, without any invasive procedures. A total of 98 stingray tracks were recorded, providing 6 h 27 min of movement paths. The tracking data suggest that stingrays may u…

0106 biological sciencesbatoidlcsh:QH426-470Home rangeUAVForaging<i>Bathytoshia brevicaudata</i>EcosistemesAquatic ScienceAerial video010603 evolutionary biology01 natural sciencesaerostatEcologia marinaZoologiaStingrayBathymetryhigh-energy coastal zoneblimplcsh:QH301-705.5Ecology Evolution Behavior and SystematicsEcologyBlimp010604 marine biology & hydrobiologyspatial ecology<i>Bathytoshia lata</i>Peixosbehaviourlcsh:GeneticsFauna marinaOceanographylcsh:Biology (General)Spatial ecologyEnvironmental scienceBay
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Spontaneous hybridizations between oilseed rape and wild radish

1998

The occurence of spontaneous hybridization between Brassica napus (oilseed rape) and Raphanus raphanistrum (wild radish) was investigated under different density conditions in cages and open-field experiments. Hybrids with wild radish as the seed parent were identified by screening for herbicide resistance belonging to rape. Small seed size and intermediate morphology were used to screen for hybrids with rape as the seed parent. Leaf isozyme patterns and flow cytometry provided confirmation of hybrids. Wild radish in an oilseed rape field produced as many as three interspecific hybrids per 100 plants. This is the first report of such a spontaneous event. The frequency of hybrids is expected…

0106 biological sciencesbiologyBrassicafood and beveragesGenetically modified cropsbiology.organism_classificationRaphanus raphanistrum010603 evolutionary biology01 natural sciencesInterspecific hybridsAgronomy[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGeneticsHerbicide resistance[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCOLZAComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics010606 plant biology & botanyHybridMolecular Ecology
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Conservation status of freshwater mussels in Europe: state of the art and future challenges

2016

Freshwater mussels of the Order Unionida provide important ecosystem functions and services, yet many of their populations are in decline. We comprehensively review the status of the 16 currently recognized species in Europe, collating for the first time their life-history traits, distribution, conservation status, habitat preferences, and main threats in order to suggest future management actions. In northern, central, and eastern Europe, a relatively homogeneous species composition is found in most basins. In southern Europe, despite the lower species richness, spatially restricted species make these basins a high conservation priority. Information on freshwater mussels in Europe is uneve…

0106 biological sciencesbiologyEcology010604 marine biology & hydrobiology15. Life on landUnionidaebiology.organism_classification010603 evolutionary biology01 natural sciencesFreshwater ecosystemGeneral Biochemistry Genetics and Molecular BiologyHabitat13. Climate actionMargaritiferidaeFreshwater pearl musselConservation statusEcosystem14. Life underwaterSpecies richnessGeneral Agricultural and Biological SciencesBiological Reviews
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Social phenotype extended to communities: Expanded multilevel social selection analysis reveals fitness consequences of interspecific interactions

2015

In social species, fitness consequences are associated with both individual and social phenotypes. Social selection analysis has quantified the contribution of conspecific social traits to individual fitness. There has been no attempt, however, to apply a social selection approach to quantify the fitness implications of heterospecific social phenotypes. Here, we propose a novel social selection based approach integrating the role of all social interactions at the community level. We extended multilevel selection analysis by including a term accounting for the group phenotype of heterospecifics. We analyzed nest activity as a model social trait common to two species, the lesser kestrel (Falc…

0106 biological sciencesbiologyEcologyFalco naumanniKestrelInterspecific competitionbiology.organism_classification010603 evolutionary biology01 natural sciencesPhenotype010601 ecologyNestGeneticsTraitGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsSelection (genetic algorithm)CoevolutionEvolution
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Phylogenetic placement of Cailliella praerupticola (Melastomataceae), a rare, monospecific lineage from Guinea, West Africa

2021

The genus Cailliella includes a single species, C. praerupticola, restricted to a sandstone plateau region in Coyah, Dubreka, Forecariah and Kindia Prefectures, Guinea, West Africa. Until its rediscovery in 2016, this species was known only by the type gathering made in 1937. We provide an emended description, photographs of living material, locality and habitat data, and a discussion of its conservation status. We further designate a lectotype for C. praerupticola. On the basis of morphology, Cailliella had been considered an isolated member of the tribe Melastomateae, possibly sister to Melastomastrum. We tested the classification of Cailliella by means of a phylogenetic analysis of C. pr…

0106 biological sciencesbiologyPhylogenetic treeLineage (evolution)WilldenowiaPlant Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesGeographyEvolutionary biologyGenusMolecular phylogeneticsInternal transcribed spacerRibosomal DNAEcology Evolution Behavior and Systematics010606 plant biology & botanyNdhFWilldenowia
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Infection by Endosymbiotic “Male-Killing” Bacteria in Coleoptera

2018

Wolbachia, Rickettsia, Spiroplasma and Cardinium are endosymbiotic and intracellular bacteria known to cause numerous disorders in host reproduction, reflected in their common name “male-killers”. In this study, 297 beetle species from various taxonomic groups were screened with the use of molecular markers for the presence of infection by any of these endosymbionts. Wolbachia was found to be the most common “male-killer” among beetle hosts as it infected approx. 27% of species. Rickettsia, Spiroplasma and Cardinium were much less prevalent as they infected: 8%, 3% and 2%, respectively, of the studied beetle species. This is the first report of Cardinium presence in beetle hosts. Incidences…

0106 biological sciencesbiologySpiroplasmabeetleintracellular infectionSpiroplasmaGeneral Medicinebiology.organism_classification010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyMicrobiology010602 entomologychemistry.chemical_compoundRickettsiachemistryMolecular markerCardiniumWolbachiaRickettsiaBacteriaEndosymbiotic bacteriaWolbachiaFolia Biologica-Krakow
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There's More to the Picture Than Meets the Eye: Nitric Oxide Cross Talk with Ca2+ Signaling

2013

Abstract Calcium and nitric oxide (NO) are two important biological messengers. Increasing evidence indicates that Ca2+ and NO work together in mediating responses to pathogenic microorganisms and microbe-associated molecular patterns. Ca2+ fluxes were recognized to account for NO production, whereas evidence gathered from a number of studies highlights that NO is one of the key messengers mediating Ca2+ signaling. Here, we present a concise description of the current understanding of the molecular mechanisms underlying the cross talk between Ca2+ and NO in plant cells exposed to biotic stress. Particular attention will be given to the involvement of cyclic nucleotide-gated ion channels and…

0106 biological sciencescalmodulinCell signalingCalmodulinPhysiology[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomyNanotechnologyPlant ScienceBiology01 natural sciencesNitric oxideTranscriptome03 medical and health scienceschemistry.chemical_compound[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/Agronomyplant defenseGeneticsPlant defense against herbivoryIon channel030304 developmental biology0303 health sciencescell signallingBiotic stressCell biologychemistryprotein S-nitrosylationgene expressionbiology.proteinplant immunitySignal transduction010606 plant biology & botanyPlant Physiology
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Aspartic proteinase from barley grains is related to mammalian lysosomal cathepsin D

1991

Resting barley (Hordeum vulgare L.) grains contain acid-proteinase activity. The corresponding enzyme was purified from grain extracts by affinity chromatography on a pepstatin-Sepharose column. The pH optimum of the affinity-purified enzyme was between 3.5 and 3.9 as measured by hemoglobin hydrolysis and the enzymatic activity was completely inhibited by pepstatin a specific inhibitor of aspartic proteinases (EC 3.4.23). Further purification on a Mono S column followed by activity measurements and sodium dodecyl sulfate-polyacrylamide gel electrophoresis revealed that the affinity-purified enzyme preparation contained two active heterodimeric aspartic proteinases: a larger 48k Da enzyme, c…

0106 biological scienceschemistry.chemical_classificationGel electrophoresis0303 health sciencesProtein subunitCathepsin DPlant ScienceBiology01 natural sciencesMolecular biologyEndopeptidase03 medical and health scienceschemistry.chemical_compoundEnzymechemistryAffinity chromatographyBiochemistryGeneticsHordeum vulgarePepstatin030304 developmental biology010606 plant biology & botanyPlanta
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