Search results for "Genes"

showing 10 items of 13944 documents

From elicitins to lipid-transfer proteins: a new insight in cell signalling involved in plant defence mechanisms.

2002

Elicitins and lipid-transfer proteins are small cysteine-rich lipid-binding proteins secreted by oomycetes and plant cells, respectively, that share some structural and functional properties. In spite of intensive work on their structure and diversity at the protein and genetic levels, the precise biological roles of lipid-transfer proteins remains unclear, although the most recent data suggest a role in somatic embryogenesis, in the formation of protective surface layers and in defence against pathogens. By contrast, elicitins are known elicitors of plant defence, and recent work demonstrating that elicitins and lipid-transfer proteins share the same biological receptors gives a new perspe…

0106 biological sciencesSomatic embryogenesisProtein ConformationDefence mechanismsPlant ScienceBiology01 natural sciencesFungal Proteins03 medical and health sciencesErgosterolReceptor030304 developmental biologyPlant DiseasesPlant Proteins0303 health sciencesBinding proteinAlgal ProteinsLysophosphatidylcholinesProteinsElicitinAntigens PlantLipidsImmunity InnateBiochemistryOomycetesProtein-lipid complexStress MechanicalSignal transductionCarrier ProteinsPlant lipid transfer proteins010606 plant biology & botanySignal TransductionTrends in plant science
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Photoreceptors and respiratory electron flow involvement in the activity of acifluorfen-methyl and LS 82-556 on nonchlorophyllous soybean cells

1987

Abstract The diphenyl ether acifluorfen-methyl [AFM; methyl 5-[2-chloro-4-(trifluoromethyl)phenoxy]-2-nitrobenzoate] and the pyridine derivative LS 82-556 [( S )-3- N -(methylbenzyl)carbamoyl-5-propionyl-2,6-lutidine] induce light-dependent polyunsaturated fatty acid peroxidation, leading to general membrane disruption. Although devoid of functional chloroplasts, cultured soybean cells are sensitive to AFM and LS 82-556 only in the light. The possible involvement of carotenoids and respiratory electron flow was examined by monitoring ethane evolution, fluorescein release, and dry weight/fresh weight ratio alteration. Herbicide effects on cells exposed to white light or blue light (380–540 n…

0106 biological sciencesStereochemistryHealth Toxicology and Mutagenesis[SDV]Life Sciences [q-bio]Antimycin ATRANSPORT D'ELECTRONS01 natural sciences03 medical and health scienceschemistry.chemical_compoundmedicineFluoresceinCarotenoidComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesTrifluoromethylDiphenyl etherGeneral MedicineChloroplast[SDV] Life Sciences [q-bio]MembraneMechanism of actionchemistryBiophysicsmedicine.symptomAgronomy and Crop Science010606 plant biology & botany
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Sucrose amendment enhances phytoaccumulation of the herbicide atrazine in Arabidopsis thaliana.

2006

International audience; Growth in the presence of sucrose was shown to confer to Arabidopsis thaliana (thale cress or mustard weed) seedlings, under conditions of in vitro culture, a high level of tolerance to the herbicide atrazine and to other photosynthesis inhibitors. This tolerance was associated with root-to-shoot transfer and accumulation of atrazine in shoots, which resulted in significant decrease of herbicide levels in the growth medium. In soil microcosms, application of exogenous sucrose was found to confer tolerance and capacity to accumulate atrazine in Arabidopsis thaliana plants grown on atrazine-contaminated soil, and resulted in enhanced decontamination of the soil. Applic…

0106 biological sciencesSucroseHealth Toxicology and MutagenesisArabidopsisSoluble sugars010501 environmental sciencesBiologyToxicologyPhotosynthesis01 natural sciencesPlant Rootschemistry.chemical_compoundSoilArabidopsisBotanyArabidopsis thalianaSoil PollutantsAtrazinePhotosynthesis[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces environmentEcosystem0105 earth and related environmental sciencesGrowth mediumHerbicides[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]fungifood and beveragesGeneral Medicinebiology.organism_classificationPollutionPhytoremediationPhytoremediationBiodegradation EnvironmentalchemistryShootAtrazineWeedPlant Shoots010606 plant biology & botany
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Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium

2010

Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…

0106 biological sciencesSystems biologyIn silicoMetabolic networkComputational biologyBiologyModels Biological01 natural sciencesMetabolic engineeringGene Knockout Techniques03 medical and health sciencesStructural BiologyModelling and Simulation010608 biotechnologyBotanyBiomassPhotosynthesislcsh:QH301-705.5Molecular Biology030304 developmental biologyAutotrophic Processes0303 health sciencesGene Expression ProfilingApplied MathematicsSynechocystisSynechocystisGenomicsDarknessbiology.organism_classificationComputer Science ApplicationsFlux balance analysislcsh:Biology (General)Genes BacterialAutotrophic ProcessesModeling and SimulationEnergy sourceGenome BacterialResearch ArticleBMC Systems Biology
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The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells

2002

Summary A cDNA encoding a protein, NtrbohD, located on the plasma membrane and homologue to the flavocytochrome of the neutrophil NADPH oxidase, was cloned in tobacco. The corresponding mRNA was accumulated when tobacco leaves and cells were treated with the fungal elicitor cryptogein. After elicitation with cryptogein, tobacco cells transformed with antisense constructs of NtrbohD showed the same extracellular alkalinization as the control, but no longer produced active oxygen species (AOS). This work represents the first demonstration of the function of a homologue of gp91–phox in AOS production in elicited tobacco cells.

0106 biological sciencesTime FactorsNicotiana tabacumMolecular Sequence DataPlant ScienceBiologyGenes Plant01 natural sciencesFungal Proteins[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsComplementary DNATobaccoGene expressionGeneticsExtracellularAOSAmino Acid SequenceRNA MessengerCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesOxidase testNADPH oxidaseGene Expression ProfilingAlgal ProteinsCell MembraneHydrogen PeroxideCell BiologyHydrogen-Ion ConcentrationPlants Genetically Modifiedbiology.organism_classification3. Good healthElicitorCell biologyPlant LeavesProtein TransportBiochemistryCell culturebiology.proteinOxidoreductasesReactive Oxygen Species010606 plant biology & botany
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A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution.

2012

BackgroundTortricidae, one of the largest families of microlepidopterans, comprise about 10,000 described species worldwide, including important pests, biological control agents and experimental models. Understanding of tortricid phylogeny, the basis for a predictive classification, is currently provisional. We present the first detailed molecular estimate of relationships across the tribes and subfamilies of Tortricidae, assess its concordance with previous morphological evidence, and re-examine postulated evolutionary trends in host plant use and biogeography.Methodology/principal findingsWe sequenced up to five nuclear genes (6,633 bp) in each of 52 tortricids spanning all three subfamil…

0106 biological sciencesTortricidaeGenetic SpeciationScienceZoologyChlidanotinaeGenes InsectMothsAnimal Phylogenetics010603 evolutionary biology01 natural sciencesEvolution MolecularMonophylyPhylogeneticsAnimalsEvolutionary SystematicsOlethreutinaeBiologyPhylogenyLikelihood FunctionsEvolutionary BiologyMultidisciplinarybiologyPhylogenetic treeEcologyQRComputational BiologyAgricultureBiodiversityAutecologybiology.organism_classificationPhylogenetics010602 entomologyBiogeographyEvolutionary biologyAnimal TaxonomyMolecular phylogeneticsMedicinePest ControlSequence AnalysisZoologyEntomologyTortricinaeMultilocus Sequence TypingResearch ArticlePloS one
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Trace element storage capacity of sediments in deadPosidonia oceanicamat from a chronically contaminated marine ecosystem

2016

Posidonia oceanica mat is considered a long-term bioindicator of contamination. Storage and sequestration of trace elements and organic carbon (Corg) were assessed in dead P. oceanica mat and bare sediments from a highly polluted coastal marine area (Augusta Bay, central Mediterranean). Sediment elemental composition and sources of organic matter have been altered since the 1950s. Dead P. oceanica mat displayed a greater ability to bury and store trace elements and Corg than nearby bare sediments, acting as a long-term contaminant sink over the past 120?yr. Trace elements, probably associated with the mineral fraction, were stabilized and trapped despite die-off of the overlying P. oceanica…

0106 biological sciencesTotal organic carbonchemistry.chemical_classificationbiologyEcology010604 marine biology & hydrobiologyHealth Toxicology and MutagenesisTrace elementSediment010501 environmental sciencesbiology.organism_classification01 natural sciencesDredgingchemistryPosidonia oceanicaEnvironmental chemistryEnvironmental ChemistryEnvironmental scienceOrganic matterBioindicatorBay0105 earth and related environmental sciencesEnvironmental Toxicology and Chemistry
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Co-inertia multivariate approach for the evaluation of anthropogenic impact on two commercial fish along Tyrrhenian coasts

2019

Abstract Aliphatic hydrocarbon levels were determined by the GC/MS technique in fish livers of Engraulis encrasicolus (Ee) and Trachurus trachurus (Tt), collected from a particular area of the Mediterranean Sea, called GSA 10, which is located exactly in Tyrrhenian Sea between Campania coast and North Sicily coast. The aim was to evaluate their potential use as specific bioindicators towards this class of contaminants. Both Tt and Ee are considered to be pollution monitoring bioindicators, due to their dominance in marine communities and economic fishing interest. Ee showed a higher tendency to bioaccumulate TAHs, due to the lower quantity of fatty acids in liver tissues with respect to Tt.…

0106 biological sciencesTrachurus trachurusHealth Toxicology and MutagenesisTotal aliphatic hydrocarbonFisheries010501 environmental sciencesEcotoxicology01 natural sciencesMediterranean seaWater columnEngraulisMediterranean SeaAnimalsEcotoxicologyDominance (ecology)Settore CHIM/01 - Chimica Analitica14. Life underwaterSicily0105 earth and related environmental sciencesEnvironmental Biomarkersbiology010604 marine biology & hydrobiologyWater PollutionPublic Health Environmental and Occupational HealthGeneral MedicineBiomarkerbiology.organism_classificationCo-inertia analysis (CIA)PollutionSalinitySeafood13. Climate actionEnvironmental chemistryBioaccumulationMultivariate AnalysisEnvironmental scienceBioindicatorEngraulis encrasicoluEnvironmental Monitoring
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Arabidopsis thaliana nicotianamine synthase 4 is required for proper response to iron deficiency and to cadmium exposure.

2013

International audience; The nicotianamine synthase (NAS) enzymes catalyze the formation of nicotianamine (NA), a non-proteinogenic amino acid involved in iron homeostasis. We undertook the functional characterization of AtNAS4, the fourth member of the Arabidopsis thaliana NAS gene family. A mutant carrying a T-DNA insertion in AtNAS4 (atnas4), as well as lines overexpressing AtNAS4 both in the atnas4 and the wild-type genetic backgrounds, were used to decipher the role of AtNAS4 in NA synthesis, iron homeostasis and the plant response to iron deficiency or cadmium supply. We showed that AtNAS4 is an important source for NA. Whereas atnas4 had normal growth in iron-sufficient medium, it dis…

0106 biological sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH : Azetidinecarboxylic AcidFMN ReductaseArabidopsis thalianaMutantArabidopsisGene ExpressionPlant Science01 natural sciencesMESH : Cation Transport ProteinsMESH : IronMESH : Arabidopsis ProteinsNicotianamine synthaseMESH : Plants Genetically Modifiedchemistry.chemical_compoundMESH : ArabidopsisGene Expression Regulation PlantGene expressionMESH: Genes PlantArabidopsis thalianaMESH : DNA BacterialHomeostasisMESH: ArabidopsisNicotianamineMESH: Stress PhysiologicalCation Transport ProteinsMESH : Adaptation PhysiologicalMESH : Cadmium2. Zero hungerchemistry.chemical_classification0303 health sciencesCadmiumMESH: IronbiologyGeneral MedicineIron DeficienciesPlants Genetically ModifiedAdaptation PhysiologicalMESH: Azetidinecarboxylic AcidMESH : PhenotypePhenotypeBiochemistryMESH: HomeostasisMESH : HomeostasisMESH : MutationAzetidinecarboxylic AcidCadmiumDNA BacterialMESH: Gene ExpressionMESH: MutationIronMESH: Cadmiumchemistry.chemical_elementMESH: FerritinsMESH: Arabidopsis ProteinsMESH: Alkyl and Aryl TransferasesGenes PlantMESH: PhenotypeNicotianamine synthase03 medical and health sciencesMESH: Cation Transport ProteinsStress PhysiologicalIron homeostasisGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyIron deficiency (plant disorder)MESH: Gene Expression Regulation PlantMESH : Genes PlantMESH : Alkyl and Aryl TransferasesMESH : Stress Physiological030304 developmental biologyMESH : FMN ReductaseAlkyl and Aryl TransferasesArabidopsis ProteinsIron deficiencyNitric oxideNicotianaminebiology.organism_classificationMESH: Adaptation PhysiologicalMESH: DNA BacterialMESH : Gene ExpressionEnzymechemistryMESH: FMN ReductaseMESH: Plants Genetically ModifiedFerritinsMutationbiology.proteinMESH : FerritinsAgronomy and Crop ScienceMESH : Gene Expression Regulation Plant010606 plant biology & botany
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GenExP, un logiciel simulateur de paysages agricoles pour l'étude de la diffusion de transgènes

2007

 ; The software GENEXP allows to simulate 2-dimensional agricultural landscapes by using a traditional algorithmic geometry. Based on real or realistic field-patterns, GENEXP provides multiannual maps of agricultural landscapes, which are used by softwares simulating the dispersal of GM pollen grains and seeds at various scales.; GENEXP est un simulateur de paysages agricoles qui engendre des découpages parcellaires en utilisant une géométrie algorithmique classique. GENEXP fournit, sur la base de parcellaires réels ou réalistes, des cartes pluriannuelles de paysages agricoles utilisables par des logiciels qui simulent la dispersion des pollens et des graines d'OGM à différentes échelles.

0106 biological sciences[INFO.INFO-AI] Computer Science [cs]/Artificial Intelligence [cs.AI]010603 evolutionary biology01 natural sciencesVORONOÏ TESSELATION[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentAGRICULTURAL LANDSCAPE[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI]diagrammes de Voronoi[ INFO.INFO-AI ] Computer Science [cs]/Artificial Intelligence [cs.AI]DIAGRAMMES DE VORONOÏpaysage agricole[SDV.EE]Life Sciences [q-bio]/Ecology environmentFIELD PATTERN[INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB]voronoi tesselationPROCESSUS PONCTUEL MARKOVIEN04 agricultural and veterinary sciencesGeneral Medicineflux de genes15. Life on landsimulationPARCELLAIRE[SDV.EE] Life Sciences [q-bio]/Ecology environmentagricultural landscape field-pattern germs distribution markov point process gene flowpaysage agricole parcellaire simulation diagrammes de Voronoi distribution de germes processus ponctuel markovien flux de genes voronoi tesselation INFORMATIQUEGERMS DISTRIBUTIONINFORMATIQUE040103 agronomy & agricultureMARKOV POINT PROCESS0401 agriculture forestry and fisheriesfield-patterngene flowDISTRIBUTION DE GERMES
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