Search results for "Genetic drift"
showing 10 items of 73 documents
Molecular surveillance of norovirus, 2005–16 : an epidemiological analysis of data collected from the NoroNet network
2018
BACKGROUND: The development of a vaccine for norovirus requires a detailed understanding of global genetic diversity of noroviruses. We analysed their epidemiology and diversity using surveillance data from the NoroNet network.METHODS: We included genetic sequences of norovirus specimens obtained from outbreak investigations and sporadic gastroenteritis cases between 2005 and 2016 in Europe, Asia, Oceania, and Africa. We genotyped norovirus sequences and analysed sequences that overlapped at open reading frame (ORF) 1 and ORF2. Additionally, we assessed the sampling date and country of origin of the first reported sequence to assess when and where novel drift variants originated.FINDINGS: W…
Chance and necessity in the genome evolution of endosymbiotic bacteria of insects.
2017
An open question in evolutionary biology is how does the selection–drift balance determine the fates of biological interactions. We searched for signatures of selection and drift in genomes of five endosymbiotic bacterial groups known to evolve under strong genetic drift. Although most genes in endosymbiotic bacteria showed evidence of relaxed purifying selection, many genes in these bacteria exhibited stronger selective constraints than their orthologs in free-living bacterial relatives. Remarkably, most of these highly constrained genes had no role in the host–symbiont interactions but were involved in either buffering the deleterious consequences of drift or other host-unrelated function…
Evolutionary impact of copy number variation rates.
2017
[Objective]: Copy number variation is now recognized as one of the major sources of genetic variation among individuals in natural populations of any species. However, the relevance of these unexpected observations goes beyond diagnosing high diversity. [Results]: Here, it is argued that the molecular rates of copy number variation, mainly the deletion rate upon variation, determine the evolutionary road of the genome regarding size. Genetic drift will govern this process only if the efective population size is lower than the inverse of the deletion rate. Otherwise, natural selection will do.
Microevolution of bank voles (Myodes glareolus) at neutral and immune-related genes during multiannual dynamic cycles: consequences for Puumala hanta…
2017
ABSTRACTUnderstanding how host dynamics, including variations of population size and dispersal, may affect the epidemiology of infectious diseases through ecological and evolutionary processes is an active research area. Here we focus on a bank vole (Myodes glareolus) metapopulation surveyed in Finland between 2005 and 2009. Bank vole is the reservoir of Puumala hantavirus (PUUV), the agent of nephropathia epidemica (NE, a mild form of hemorrhagic fever with renal symptom) in humans.M glareoluspopulations experience multiannual density fluctuations that may influence the level of genetic diversity maintained in bank voles, PUUV prevalence and NE occurrence. We examine bank vole metapopulati…
Drift and evolutionary forces
2016
This arride analyzes the view of evolutionary theory as a theory of forces. The analogy with Newtonian mechanics has been challenged due to the alleged mismatch between drift and the other evolutionary forces. Since genetic drifr has no direction severa! authors tried to protect its status as a force: denying its lack of directionality, extending the notion of force and looking for a force in physics which also lacks of direction. I analyse these approaches, and although this strategy finally succeeds, this discussion overlooks the crucial point on the debate between causalists and statisticalists: the causal status of evolutionary theoty.; El presente artículo analiza la visión de la teorí…
Demogenomic modeling of the timing and the processes of early European farmers differentiation
2020
AbstractThe precise genetic origins of the first Neolithic farming populations, as well as the processes and the timing of their differentiation, remain largely unknown. Based on demogenomic modeling of high-quality ancient genomes, we show that the early farmers of Anatolia and Europe emerged from a multiphase mixing of a Near Eastern population with a strongly bottlenecked Western hunter-gatherer population after the Last Glacial Maximum. Moreover, the population branch leading to the first farmers of Europe and Anatolia is characterized by a 2,500-year period of extreme genetic drift during its westward range expansion. Based on these findings, we derive a spatially explicit model of the…
Microgeographic Variation of Genetic Polymorphism in Argyresthia mendica (Lep.: Argyresthiidae)
1988
Field studies on the genetic structure of populations show a considerable amount of heterogeneity in space and time. In many cases, these heterogeneities can be related to structures in the environment, such as properties of soil, availability of special food resources, topographic conditions or climate. In other cases the genetic structure can be explained by properties of the plant and animal species under study, e.g. ability and speed of migration and colonization (Karlin and Nevo 1976; Endler 1977; Nevo 1978; Nevo and Yang 1979; Nevo et al. 1981; Seitz and Komma 1984; Wohrmann 1984).
Genetic relationships between sympatric and allopatric Coregonus ciscoes in North and Central Europe
2021
Abstract Background Sympatric speciation along ecological gradients has been studied repeatedly, in particular in freshwater fishes. Rapid post-glacial ecological divergence has resulted in numerous endemic species or ecologically distinct populations in lakes of the temperate zones. Here, we focus on the Baltic cisco (Coregonus albula) complex, to study the genetic similarity among two pairs of sympatric autumn- and spring-spawning populations from post-glacial German Lakes Stechlin and Breiter Luzin. For comparison, we included a similar pair of sympatric populations from the Swedish Lake Fegen. We wanted to explore potential genetic similarities between the three sympatric cisco populati…
Conservation genetics of an endemic from the Mediterranean Basin: high genetic differentiation but no genetic diversity loss from the last population…
2013
The Mediterranean Basin is a biodiversity hotspot, housing > 11.000 narrowly endemic plant species, many of which are declining due to mass tourism and agricultural intensification. To investigate the genetic resource impacts of ongoing habitat loss and degradation, we characterized the genetic variation in the last known populations of Leopoldia gussonei, a self-compatible endangered Sicilian Grape Hyacinth numbering less than 3,000 remaining individuals, using AFLP. Results demonstrated significant genome-wide genetic differentiation among all extant populations (I broken vertical bar(ST) = 0.05-0.56), and genetic clustering according to geographic location. Gene diversity was fairly c…
Genetic structure of Cirsium palustre (Asteraceae) and its role in host diversification of Tephritis conura (Diptera: Tephritidae)
2008
Whether or not a host plant is incorporated into a phytophagous insect's diet depends on both the insect's ability to colonize the novel host and the host plant's susceptibility to the insect. The latter, again, will be influenced by the genetic structure of the host plant. Cirsium palustre (marsh thistle) is heavily infested by the tephritid fly Tephritis conura in northern Britain, whereas infestation is not only absent in southern England, but also absent on the European continent where T. conura is common on other Cirsium. To understand why regional infestation patterns evolve, we studied how genetic structure and phylogeographic ancestry of C. palustre are related to the probability of…