Search results for "Genotype"
showing 10 items of 1725 documents
Impact of the growth of different maize genotypes on arbuscular mycorrhizal fungi
2001
International audience
Do crop genotypes have residual effects on Glomeromycota communities in agro-systems
2006
International audience
A two-stage genome-wide association study of sporadic amyotrophic lateral sclerosis
2009
The cause of sporadic amyotrophic lateral sclerosis (ALS) is largely unknown, but genetic factors are thought to play a significant role in determining susceptibility to motor neuron degeneration. To identify genetic variants altering risk of ALS, we undertook a two-stage genome-wide association study (GWAS): we followed our initial GWAS of 545 066 SNPs in 553 individuals with ALS and 2338 controls by testing the 7600 most associated SNPs from the first stage in three independent cohorts consisting of 2160 cases and 3008 controls. None of the SNPs selected for replication exceeded the Bonferroni threshold for significance. The two most significantly associated SNPs, rs2708909 and rs2708851 …
Studies concerning the production of volatile oil, rhizomes and roots, to different genotypes of Valeriana officinalis L.
2010
Valeriana officinalis L. is considered to pertain to European species, with great ecologic plasticity, which allows its adaptation to climate conditions characteristics to plain areas and also to mountain areas up to an altitude of 2400 meters. The species is a well-known curative plant, with a long history and multiple uses. Essential oils deriving from this species revealed the interest of researchers in food industry, cosmetics and officinal industry, furthermore being used as additives too.The raw material from which essential oils are being extracted is represented mainly by rhizomes and roots. This study has the purpose to emphasize the differences of essential oils production registe…
Quantitative determination of casein genetic variants in goat milk: Application in Girgentana dairy goat breed
2016
The study was conducted to develop a high-performance liquid chromatographic (HPLC) method to quantify casein genetic variants (αs2-, β-, and κ-casein) in milk of homozygous individuals of Girgentana goat breed. For calibration experiments, pure genetic variants were extracted from individual milk samples of animals with known genotypes. The described HPLC approach was precise, accurate and highly suitable for quantification of goat casein genetic variants of homozygous individuals. The amount of each casein per allele was: αs2-casein A = 2.9 ± 0.8 g/L and F = 1.8 ± 0.4 g/L; β-casein C = 3.0 ± 0.8 g/L and C1 = 2.0 ± 0.7 g/L and κ-casein A = 1.6 ± 0.3 g/L and B = 1.1 ± 0.2 g/L. A good correl…
An improved high yield method to obtain microsatellite genotypes from red deer antlers up to 200 years old.
2013
Analysis of DNA from older samples, such as museum specimen, is a promising approach to studying genetics of populations and ecological processes across several generations. Here, we present a method for extracting high quality nuclear DNA for microsatellite analysis from antlers of red deer (Cervus elaphus). The genotyping of individuals was based on nine microsatellite loci. Because the amount of DNA found in antlers was high, we could reduce the amount of sample and chemicals used and shorten the decalcification time in comparison to other methods. Using these methods, we obtained genotypes from antlers up to 200 years old.
The genotypes and virulence attributes of C. albicans isolates from oral leukoplakia
2021
Background There is a debate as to whether some types of oral leucoplakias (OL) are caused by Candida species, and whether they contribute to the malignant transformation, associated with a minority of such lesions. As no detailed population analysis of yeast isolates from OL is available, we evaluated the virulence attributes, and genotypes of 35 C. albicans from OL, and compared their genotypes with 18 oral isolates from healthy individuals. Material and Methods The virulence traits evaluated were esterase, phospholipase, proteinase, haemolysin and coagulase production, and phenotypic switching activity, and yeast adherence and biofilm formation. DNA from OL and control yeasts were evalua…
Data from: Constant, cycling, hot and cold thermal environments: strong effects on mean viability but not on genetic estimates
2012
It has frequently been suggested that trait heritabilities are environmentally sensitive, and there are genetic trade-offs between tolerating different environments such as hot and cold or constant and fluctuating temperatures. Future climate predictions suggest an increase in both temperatures and their fluctuations. How species will respond to these changes is uncertain, particularly as there is a lack of studies which compare genetic performances in constant vs. fluctuating environments. In this study, we used a nested full-sib/half-sib breeding design to examine how the genetic variances and heritabilities of egg-to-adult viability differ at high and low temperatures with and without da…
Powdery mildew resistance genes in Latvian barley varieties
2004
Thirty-three Latvian spring barley varieties and breeding lines and 90individual progenies from these were tested at the seedling stage for their reaction to a maximum 37 isolates of Blumeria graminis f. sp. hordei. Eighteen varieties were composed of two or three lines with different resistance. TwelveMl powdery mildew resistance genes(a1, a6, a7, a8, a9, a12, a13, at, g, k1, (Kr) and La) and four Ml genes closely linked to the Mla locus [a(Al2), a(No3), a(Em2) and a(Ru3)] were found. Mla8, Mlg and Mlk1 were the most frequent genes that occurred among the tested genotypes. The results confirm the pedigrees of all genotypes apart from cv. Agra and the breeding line L-215.
Differences in allozyme patterns between Diaphanosoma brachyurum and Diaphanosoma mongolianum, as revealed in Central European populations
1995
Recent taxonomic revisions in the genus Diaphanosoma have made the uncertainty in species discrimination with morphological characters obvious. Therefore species characterization on a genetic basis seems to be required. Here we examined the genetic structure of two Diaphanosoma mongolianum populations and three Diaphanosoma brachyurum populations in Central Europe by allozyme electrophoresis. A genetic differentiation between both species was evident. 5 out of 9 tested loci carried diagnostic alleles. Both species differed in their habitat choice: D. mongolianum was adapted to higher trophic levels than D. brachyurum. Co-occurrence was observed in a eutrophic lake. Populations sampled from …