Search results for "Génétique"

showing 10 items of 132 documents

A genomic map of climate adaptation in Mediterranean cattle breeds

2019

International audience; Domestic species such as cattle (Bos taurus taurus and B. t. indicus) represent attractive biological models to characterize the genetic basis of short term evolutionary response to climate pressure induced by their post-domestication history. Here, using newly generated dense SNP genotyping data, we assessed the structuring of genetic diversity of 21 autochtonous cattle breeds from the whole Mediterranean basin and performed genome-wide association analyses with covariables discriminating the different Mediterranean climate sub-types. This provided insights into both the demographic and adaptive histories of Mediterranean cattle. In particular, a detailed functional…

0106 biological sciences0301 basic medicineMediterranean climateCandidate genehttp://aims.fao.org/aos/agrovoc/c_24002Polymorphisme génétiqueAcclimatizationBreedingMediterraneanFacteur climatiquehttp://aims.fao.org/aos/agrovoc/c_11701 natural sciencesMediterranean Basinhttp://aims.fao.org/aos/agrovoc/c_4397http://aims.fao.org/aos/agrovoc/c_1081http://aims.fao.org/aos/agrovoc/c_3225Phylogeny2. Zero hungerGenomeEcology[SDV.BA]Life Sciences [q-bio]/Animal biologyhttp://aims.fao.org/aos/agrovoc/c_24031Chromosome MappingGenomicsSNP genotypingRace (animal)http://aims.fao.org/aos/agrovoc/c_3373http://aims.fao.org/aos/agrovoc/c_2080http://aims.fao.org/aos/agrovoc/c_4940http://aims.fao.org/aos/agrovoc/c_4026Génotypelocal adaptationBétailThermotoleranceBehavior and SystematicGenotypeP40 - Météorologie et climatologiehttp://aims.fao.org/aos/agrovoc/c_29554EvolutionIntrogressionSNPBiologyhttp://aims.fao.org/aos/agrovoc/c_259010603 evolutionary biology03 medical and health sciencescattle climate genetics local adaptation Mediterranean SNPhttp://aims.fao.org/aos/agrovoc/c_3081GeneticsAnimalsAdaptationhttp://aims.fao.org/aos/agrovoc/c_4697http://aims.fao.org/aos/agrovoc/c_8013climateEcology Evolution Behavior and SystematicsLocal adaptationGenetic diversityhttp://aims.fao.org/aos/agrovoc/c_2503Genetic Variation15. Life on landL10 - Génétique et amélioration des animauxClimat méditerranéen030104 developmental biologyGenetics PopulationEvolutionary biologycattleCarte génétiquehttp://aims.fao.org/aos/agrovoc/c_7273Adaptationgenetic
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Estimating the genetic diversity and structure ofQuercus trojanaWebb populations in Italy by SSRs: implications for management and conservation

2017

Studying the genetic diversity and structure of the current forest populations is essential for evaluating the ability to survive to future biotic and abiotic changes and planning conservation strategies. Quercus trojana is an eastern Mediterranean tree species with a fragmented distribution range, and its westernmost outposts are located in southern Italy. The demand for timber and cropland over the centuries has severely reduced it s occurrence in this part of the range. We assessed the genetic diversity and structure of the extant Italian populations of Q. trojana and derived conservation guidelines. A total of 322 samples were genotyped with six polymorphic nuclear microsatellite marker…

0106 biological sciences0301 basic medicineSettore AGR/05 - Assestamento Forestale E SelvicolturaQuercus trojana Genetic diversity Population structure SSRs markers ConservationQuercus trojanaRange (biology)PopulationConservationPopulation structure010603 evolutionary biology01 natural sciencesGenetic diversity03 medical and health sciencesQuercus trojanaeducationAbiotic componentQuercus trojana diversité génétique structure de populations marqueurs SSRs conservationGlobal and Planetary ChangeGenetic diversityeducation.field_of_studySSRs markersEcologybiologyEcologyForestrybiology.organism_classification030104 developmental biologyMicrosatelliteGene poolSpecies richnessCanadian Journal of Forest Research
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Cytological and molecular characterization of three gametoclones of Citrus clementina

2013

Abstract Background Three gametoclonal plants of Citrus clementina Hort. ex Tan., cv. Nules, designated ESP, FRA, and ITA (derived from three labs in Spain, France, and Italy, respectively), were selected for cytological and molecular characterization in order to elucidate genomic rearrangements provoked by haploidization. The study included comparisons of their ploidy, homozygosity, genome integrity, and gene dosage, using chromosome counting, flow cytometry, SSR marker genotyping, and array-Comparative Genomic Hybridization (array-CGH). Results Chromosome counting and flow cytometry revealed that ESP and FRA were haploid, but ITA was tri-haploid. Homozygous patterns, represented by a sing…

0106 biological sciencesCitrus[SDV]Life Sciences [q-bio]ÉvolutionPlant ScienceHaploidyHORT EX TAN01 natural sciencesGenomeF30 - Génétique et amélioration des planteshttp://aims.fao.org/aos/agrovoc/c_3185SSRSMARKERShttp://aims.fao.org/aos/agrovoc/c_2091http://aims.fao.org/aos/agrovoc/c_8837Citrus clementinaGynogénèseGenetics0303 health scienceshttp://aims.fao.org/aos/agrovoc/c_1637Homozygotehttp://aims.fao.org/aos/agrovoc/c_27583http://aims.fao.org/aos/agrovoc/c_26859Culture d'anthèreCytologieRECOVERYSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeGENOMEhttp://aims.fao.org/aos/agrovoc/c_3490[SDE]Environmental SciencesGametoclonal variationhttp://aims.fao.org/aos/agrovoc/c_6ce991ddPloidyhttp://aims.fao.org/aos/agrovoc/c_4026Genome PlantResearch ArticleLocus des caractères quantitatifsSéquence nucléotidiqueAnther cultureGamèteLocus (genetics)BiologyGenome sequencingGene dosageAnther culture Gynogenesis Gametoclonal variation Genome sequencingDNA sequencinghttp://aims.fao.org/aos/agrovoc/c_489103 medical and health sciencesGynogenesisRETICULATA BLANCOREGENERATIONHaploïdiehttp://aims.fao.org/aos/agrovoc/c_3081Anther culture;Gynogenesis;Gametoclonal variation;Genome sequencing;HORT EX TAN;ANTHER CULTURE;RETICULATA BLANCO;REGENERATION;RECOVERY;MARKERS;GENOME;SSRS[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAllelehttp://aims.fao.org/aos/agrovoc/c_37974GeneGenotypingAlleles030304 developmental biologyhttp://aims.fao.org/aos/agrovoc/c_2745Biologie moléculairehttp://aims.fao.org/aos/agrovoc/c_7273010606 plant biology & botany
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New polymorphic microsatellite loci in the house sparrow, Passer domesticus.

2009

3 pages; International audience; We developed 13 new polymorphic microsatellite loci in the house sparrow (Passer domesticus), which exhibited from 2 to 15 alleles. Observed and expected heterozygosities ranged from 0.17 to 0.77 and from 0.35 to 0.85, respectively. We detected no linkage disequilibrium between loci. Allele frequencies supported Hardy–Weinberg equilibrium for 8 loci out of 13 after Bonferroni correction. Combined with loci previously isolated in the house sparrow, these new microsatellite markers provide valuable tools to study population genetics of this species.

0106 biological sciencesPasserLinkage disequilibriummicrosatellite010603 evolutionary biology01 natural sciences03 medical and health sciencesbiology.animalhttp://aims.fao.org/aos/agrovoc/c_3081GeneticsAlleleAllele frequencypasserineMoineauEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesSparrowbiologyhouse sparrowpasserine.[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsL10 - Génétique et amélioration des animauxbiology.organism_classificationPasserine[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsEvolutionary biologyMicrosatellitePopulation studyL20 - Écologie animalehttp://aims.fao.org/aos/agrovoc/c_7275Passerhttp://aims.fao.org/aos/agrovoc/c_1153Biotechnology
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Role of Thylakoid ATP/ADP Carrier in Photoinhibition and Photoprotection of Photosystem II in Arabidopsis

2010

L'article original est publié par The American Society of Plant Biologists; International audience; The chloroplast thylakoid ATP/ADP carrier (TAAC) belongs to the mitochondrial carrier superfamily and supplies the thylakoid lumen with stromal ATP in exchange for ADP. Here, we investigate the physiological consequences of TAAC depletion in Arabidopsis (Arabidopsis thaliana). We show that the deficiency of TAAC in two T-DNA insertion lines does not modify the chloroplast ultrastructure, the relative amounts of photosynthetic proteins, the pigment composition, and the photosynthetic activity. Under growth light conditions, the mutants initially displayed similar shoot weight, but lower when r…

0106 biological sciencesPhotosynthetic reaction centrePHOTOSYSTEME IIPhotoinhibitionPhotosystem IIPhysiologyPlant Sciencemacromolecular substancesProtein degradationBiologyPlants genetics01 natural sciencesChloroplast thylakoid[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesGénétique des plantesGenetics030304 developmental biologyTAAC0303 health sciencesPHOTOSYSTEME II;TAACphotoinhibitionta1183food and beveragesthylakoideChloroplastarabidopsisphotoprotectionBiochemistryPhotoprotectionThylakoidBiophysics010606 plant biology & botanyPlant Physiology
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Permanent genetic resources added to molecular ecology resources database 1 April 2010 - 31 May 2010

2010

Correspondance: Molecular Ecology Resources Primer Development Consortium, E-mail: editorial.office@molecol.com; International audience; This article documents the addition of 396 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Anthocidaris crassispina, Aphis glycines, Argyrosomus regius, Astrocaryum sciophilum, Dasypus novemcinctus, Delomys sublineatus, Dermatemys mawii, Fundulus heteroclitus,Homalaspis plana, Jumellea rossii, Khaya senegalensis, Mugil cephalus, Neoceratitis cyanescens, Phalacrocorax aristotelis, Phytophthora infestans, Piper cordulatum, Pterocarpus indicus, Rana dalmatina, Rosa pulverulenta, Saxifraga …

0106 biological sciencesPiper marginatumPHYLOGENYSemecarpusMOLECULAR MARKERSECOLOGYcomputer.software_genre010603 evolutionary biology01 natural sciences03 medical and health sciencesLaboratorium voor PlantenveredelingRana ibericaREFERENCEMENTSPECIESPOPULATION GENETICSGENBANKBotanyGeneticsLife ScienceMICROSATELLITE MARKERmicrosatellite marker databasePiper cordulatumEcology Evolution Behavior and Systematics030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesbiologyDatabaseEPS-2Bioint Moleculair PhytopathologyTAXONOMY15. Life on landL10 - Génétique et amélioration des animauxbiology.organism_classificationJumelleaLaboratorium voor PhytopathologieFundulusPlant BreedingINSECTEMOLECULAR ECOLOGY RESOURCE DATABASECATALOGUELaboratory of PhytopathologyFundulus olivaceusJumellea rectaL20 - Écologie animaleGENETIQUE DES POPULATIONScomputerECOLOGIEBiotechnology
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Impact of vector dispersal and host-plant fidelity on the dissemination of an emerging plant pathogen

2012

International audience; Dissemination of vector-transmitted pathogens depend on the survival and dispersal of the vector and the vector's ability to transmit the pathogen, while the host range of vector and pathogen determine the breath of transmission possibilities. In this study, we address how the interaction between dispersal and plant fidelities of a pathogen (stolbur phytoplasma tuf-a) and its vector (Hyalesthes obsoletus: Cixiidae) affect the emergence of the pathogen. Using genetic markers, we analysed the geographic origin and range expansion of both organisms in Western Europe and, specifically, whether the pathogen's dissemination in the northern range is caused by resident vecto…

0106 biological sciencesRange (biology)Population DynamicsPopulation geneticslcsh:Medicine01 natural sciencessanté des plantesphytoplasme du stolburPhyletic PatternsVitisUrtica dioicahyalesthes obsoletuslcsh:SciencePathogenpathologie végétalePhylogenybactérie0303 health sciencesMultidisciplinaryEcologyEcologystolburUrtica dioicaAgricultureBiodiversityHost-Pathogen InteractionPhytoplasmaépidémiologieinsecte vecteuragent pathogèneResearch ArticleDNA BacterialGenetic MarkersPhytoplasmaEvolutionary ProcessesPhytopathology and phytopharmacyEmergenceBiologyDNA MitochondrialMicrobiologyVector Biology03 medical and health sciencesmollicute phytopathogèneIntegrated ControlintéractionEvolutionary SystematicsParasite EvolutionBiologyHybridizationMicrobial Pathogens030304 developmental biologyPlant DiseasesEvolutionary BiologyPopulation BiologyHost (biology)lcsh:Rtransmission de la maladiebiology.organism_classificationPhytopathologie et phytopharmacievariation génétiqueOrganismal Evolution[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyEmerging Infectious DiseasesVector (epidemiology)Microbial EvolutionBiological dispersallcsh:QParasitologyPest ControlPopulation EcologyZoologyEntomologyPopulation Genetics010606 plant biology & botanyCoevolution
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Possible amphi-Atlantic dispersal of Scyllarus lobsters (Crustacea: Scyllaridae): molecular and larval evidence

2017

14 pages, 6 figures, 1 table

0106 biological sciencesSystematicsphylogénétiquewater bloomsArthropodaplanktonic larval duration010603 evolutionary biology01 natural sciencesDNA barcodingPhyllosomaCrustaceaDecapodaAnimaliaamphi-Atlantic distributionDNA barcodingdéveloppement larvaire14. Life underwaterScyllarusanalyse moléculaireMalacostracahomarusEcology Evolution Behavior and SystematicsTaxonomybiologyEcologyprolifération planctonique010604 marine biology & hydrobiologySlipper lobsterScyllaridaeBiodiversitydispersion des populationscrustaceabiology.organism_classificationCrustaceanphylogenetics[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate ZoologySister groupBiological dispersalAnimal Science and ZoologySlipper lobsteratlantiqueatlantic
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GeneSys-Beet: A model of the effects of cropping systems on gene flow between sugar beet and weed beet

2008

A weedy form of the genus Beta, i.e. Beta vulgaris ssp. vulgaris (hence ''weed beet'') frequently found in sugar beet is impossible to eliminate with herbicides because of its genetic proximity to the crop. It is presumed to be the progeny of accidental hybrids between sugar beet (ssp. vulgaris) and wild beet (ssp. maritima), or of sugar beet varieties sensitive to vernalization and sown early in years with late cold spells. In this context, genetically modified (GM) sugar beet varieties tolerant to non-selective herbicides would be interesting to manage weed beet. However, because of the proximity of the weed to the crop, it is highly probable that the herbicide-tolerance transgene would b…

0106 biological scienceshttp://aims.fao.org/aos/agrovoc/c_890PopulationSoil ScienceContext (language use)H60 - Mauvaises herbes et désherbageFlux de gènesGenetically modified01 natural sciencesF30 - Génétique et amélioration des planteshttp://aims.fao.org/aos/agrovoc/c_9000024Crophttp://aims.fao.org/aos/agrovoc/c_37331http://aims.fao.org/aos/agrovoc/c_34285[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyhttp://aims.fao.org/aos/agrovoc/c_2018Cropping systemeducation2. Zero hungereducation.field_of_studybiologyU10 - Informatique mathématiques et statistiquesModélisation des culturesfungifood and beverages04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationWeed controlGene flowTillagePratique culturalehttp://aims.fao.org/aos/agrovoc/c_8347AgronomyOrganisme génétiquement modifié040103 agronomy & agriculture0401 agriculture forestry and fisheriesSugar beetBeta vulgarisWeedAgronomy and Crop ScienceMauvaise herbeModelCropping system010606 plant biology & botanyField Crops Research
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Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2009-31 January 2010

2010

4 pages; International audience; This article documents the addition of 220 microsatellite marker loci to the Molecular Ecology Resources Database. Loci were developed for the following species: Allanblackia floribunda, Amblyraja radiata, Bactrocera cucurbitae, Brachycaudus helichrysi, Calopogonium mucunoides, Dissodactylus primitivus, Elodea canadensis, Ephydatia fluviatilis, Galapaganus howdenae howdenae, Hoplostethus atlanticus, Ischnura elegans, Larimichthys polyactis, Opheodrys vernalis, Pelteobagrus fulvidraco, Phragmidium violaceum, Pistacia vera, and Thunnus thynnus. These loci were cross-tested on the following species: Allanblackia gabonensis, Allanblackia stanerana, Neoceratitis …

0106 biological sciencesmicrosatellitePopulation geneticsConservation GeneticAllanblackiaAtlantic bluefin tunacomputer.software_genre010603 evolutionary biology01 natural sciencesPistacia terebinthusmicrosatellitesF30 - Génétique et amélioration des plantes03 medical and health sciencesBotanyGeneticsBactroceraESTEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsDatabasebiologyPistaciaThunnuAnimalCeratitis rosahttp://aims.fao.org/aos/agrovoc/c_444Ceratitis capitataL10 - Génétique et amélioration des animauxbiology.organism_classificationhttp://aims.fao.org/aos/agrovoc/c_5993IschnuraAllanblackia floribundaFishGenetic markersPlantemicrosatellites; Genetic markers; Population geneticsGENETIQUE DES POPULATIONS[ SDV.GEN ] Life Sciences [q-bio]/GeneticscomputerECOLOGIEBiotechnology
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