Search results for "HAp"

showing 10 items of 2767 documents

Segmentation Integrating Watershed and Shape Priors Applied to Cardiac Delayed Enhancement MR Images

2017

International audience; Background: In recent years, there has been a rapid rise in the use of shape priors applied to segmentation process of medical images. Previous approaches on left ventricle segmentation from Delayed-Enhancement Magnetic Resonance Imaging (DE-MRI) have focused on the extraction of myocardium or just diseased region in short axis orientation. However these studies did not take into account the segmentation of non-diseased myocardium from DE-MRI. The segmentation of non-diseased myocardium from DE-MRI, has some useful applications. For instance it can simplify the PET-MR registration process.Methods: This paper presents a novel semi-automatic segmentation method of non-…

DE-MRIComputer science[SDV.IB.IMA]Life Sciences [q-bio]/Bioengineering/ImagingBiomedical EngineeringBiophysicsScale-space segmentation030204 cardiovascular system & hematology030218 nuclear medicine & medical imaging03 medical and health sciences0302 clinical medicineSegmentationSørensen–Dice coefficientInformationMagnetic-Resonance ImagesSegmentationComputer vision[ SDV.IB ] Life Sciences [q-bio]/BioengineeringCardiac imaging[ SDV.IB.IMA ] Life Sciences [q-bio]/Bioengineering/ImagingOrientation (computer vision)business.industryImage segmentationGold standard (test)Computer aided diagnosisComputer-aided diagnosisGraph Cuts[SDV.IB]Life Sciences [q-bio]/BioengineeringArtificial intelligencebusinessShape priorsCardiac imaging
researchProduct

Heterotrophic microorganisms in deteriorated medieval wall paintings in southern Italian churches

2008

The Campania region in southern Italy is noted for its large number of churches that harbour invaluable frescoes, dated from the beginnings of the 4th up to the 13th century. The wall paintings represent an integral part of the monuments, and their deterioration constitutes a potentially significant loss for the world's cultural heritage. Heterotrophic microorganisms such as bacteria and mould can grow on the surface of paintings that contain a wide range of organic and inorganic constituents, and provide different ecological. niches that are exploited by a large variety of microbial. species. We isolated and identified the heterotrophic microorganisms found in the biodegraded medieval wall…

DNA BacterialIdentificationMedieval wall paintingMicroorganismMolecular Sequence DataBacillus cereusHeterotrophic microorganismDNA RibosomalMicrobiologyPaenibacillusGenusRNA Ribosomal 16SBotanyWall paintingDeteriorationDNA FungalPhylogenyBacillus (shape)BacteriabiologyActinomyceteBacillus pumilusFungiHeterotrophic ProcessesAlternariabiology.organism_classification16S ribosomal RNAHistory MedievalhumanitiesBiodeteriorationItalyPaintingsSettore AGR/16 - Microbiologia AgrariaMicrobiological Research
researchProduct

Diversity and distribution of marine heterotrophic bacteria from a large culture collection

2020

16 pages, 5 figures, 3 tables, supplementary information https://doi.org/10.1186/s12866-020-01884-7

DNA BacterialMicrobiology (medical)Deep oceanMesopelagic zonelcsh:QR1-502Bacterial isolates; Deep ocean; Photic ocean; DiversityDNA RibosomalMicrobiologyDeep sealcsh:MicrobiologyBathyal zone03 medical and health sciencesMarine bacteriophageRNA Ribosomal 16SGammaproteobacteriaMediterranean SeaPhotic zone14. Life underwaterAtlantic OceanIndian OceanPhotic oceanPhylogeny030304 developmental biology0303 health sciencesDiversityPacific OceanBacteriabiologyArctic Regions030306 microbiologyEcologyAlphaproteobacteriaHeterotrophic ProcessesSequence Analysis DNAbiology.organism_classificationPhylogeography13. Climate actionAphotic zoneBacterial isolatesWater MicrobiologyResearch Article
researchProduct

Development of a real-time PCR assay for detection and quantification of enterotoxigenic members of Bacillus cereus group in food samples

2009

A highly sensitive real-time PCR (qPCR) procedure, targeting the phosphatidylcholine-specific phospholipase C gene (pc-plc), was developed for specific detection and quantification of strains belonging to Bacillus cereus group. The target region was selected based on the enterotoxigenic profiles of 75 Bacillus strains. The inclusivity and exclusivity of the RTi-PCR assay were assessed with 59 isolates of the B. cereus group, 16 other Bacillus spp., and 4 non-Bacillus strains. The assay was also used to construct calibration curves for different food matrices, and it had a wide quantification range of 6 log units using both serial dilutions of purified DNA and calibrated cell suspensions of …

DNA BacterialSerial dilutionEggsMolecular Sequence DataColony Count MicrobialBacillus cereusFood ContaminationPolymerase Chain ReactionSensitivity and SpecificityMicrobiologyMicrobiologyEnterotoxinsBacillus cereusSpecies SpecificityHumansFood microbiologyDetection limitBacillus (shape)ChromatographybiologyfungiInfant NewbornInfantReproducibility of ResultsSequence Analysis DNAGeneral Medicinebiology.organism_classificationBacillalesInfant FormulaCereusCalibrationFood MicrobiologyFood ScienceFood contaminantInternational Journal of Food Microbiology
researchProduct

The glycosyltransferase activities of lysyl hydroxylase 3 (LH3) in the extracellular space are important for cell growth and viability.

2008

Abstract Lysyl hydroxylase (LH) isoform 3 is a post-translational enzyme possessing LH, collagen galactosyltransferase (GT) and glucosyltransferase (GGT) activities. We have demonstrated that LH3 is found not only intracellularly, but also on the cell surface and in the extracellular space, suggesting additional functions for LH3. Here we show that the targeted disruption of LH3 by siRNA causes a marked reduction of both glycosyltransferase activities, and the overexpression of LH3 in HT-1080 cells increases hydroxylation of lysyl residues and the subsequent galactosylation and glucosylation of hydroxylysyl residues. These data confirm the multi-functionality of LH3 in cells. Furthermore, t…

DNA ComplementaryGlycosylationCell SurvivalLysyl hydroxylaseCellhydroxylysyl glycosylationFluorescent Antibody Techniquelysyl hydroxylaseMicrotubulesPermeabilityCell LineGlycosyltransferasemedicineExtracellularAnimalsHumanscell growthViability assayRNA Small InterferingCell Shapecell viabilityCell ProliferationbiologyCell DeathCell growthProcollagen-Lysine 2-Oxoglutarate 5-Dioxygenasecollagen biosynthesisGlycosyltransferasesCell BiologyArticlesGalactosyltransferasesMolecular biologyPeptide FragmentsCulture MediaActin Cytoskeletonmedicine.anatomical_structurepost-translational modificationCell culturebiology.proteinMolecular MedicineGlucosyltransferaseExtracellular Spacehydroxylysyl glycosyltransferaseJournal of cellular and molecular medicine
researchProduct

The Chaperone Activity of Clusterin is Dependent on Glycosylation and Redox Environment

2014

Background/Aims: Clusterin (CLU), also known as Apolipoprotein J (ApoJ) is a highly glycosylated extracellular chaperone. In humans it is expressed from a broad spectrum of tissues and related to a plethora of physiological and pathophysiological processes, such as Alzheimer's disease, atherosclerosis and cancer. In its dominant form it is expressed as a secretory protein (secreted CLU, sCLU). During its maturation, the sCLU-precursor is N-glycosylated and cleaved into an α- and a β-chain, which are connected by five symmetrical disulfide bonds. Recently, it has been demonstrated that besides the predominant sCLU, rare intracellular CLU forms are expressed in stressed cells. Since these for…

DNA ComplementaryGlycosylationGlycosylationPhysiologyMutantCarbohydrateslcsh:Physiologylcsh:Biochemistrychemistry.chemical_compoundChaperonesHumanslcsh:QD415-436Redox biologySecretory pathwaylcsh:QP1-981ClusterinbiologyRetro-translocationProprotein convertaseProteostasis networkOxidative StressClusterinSecretory proteinHeat shockchemistryBiochemistryApolipoprotein JChaperone (protein)Proteolysisbiology.proteinOxidation-ReductionIntracellularMolecular ChaperonesFurin-like proprotein convertasesCellular Physiology and Biochemistry
researchProduct

CH4 oxidation in a boreal lake during the development of hypolimnetic hypoxia

2020

AbstractFreshwater ecosystems represent a significant natural source of methane (CH4). CH4 produced through anaerobic decomposition of organic matter (OM) in lake sediment and water column can be either oxidized to carbon dioxide (CO2) by methanotrophic microbes or emitted to the atmosphere. While the role of CH4 oxidation as a CH4 sink is widely accepted, neither the magnitude nor the drivers behind CH4 oxidation are well constrained. In this study, we aimed to gain more specific insight into CH4 oxidation in the water column of a seasonally stratified, typical boreal lake, particularly under hypoxic conditions. We used 13CH4 incubations to determine the active CH4 oxidation sites and the …

DYNAMICS010504 meteorology & atmospheric sciencesBoreal lake010501 environmental sciences01 natural sciencesSink (geography)Methanechemistry.chemical_compoundWater columnboreal lakeHypoxiaWater Science and TechnologyStable isotopesTotal organic carbonchemistry.chemical_classificationgeography.geographical_feature_categoryEcologymethanekerrostumatHypoxia (environmental)WATER COLUMNboreaalinen vyöhykekasvihuonekaasutGreenhouse gaseshypoksiaSUMMEREnvironmental chemistryCarbon dioxideHypolimnionMethaneSEDIMENTSResearch ArticlehapetusFLUXESoxidation119 Other natural sciencesstable isotopesAquatic ScienceCO2 CONCENTRATIONjärvetmetaanistratificationORGANIC-CARBONSTRATIFICATIONgreenhouse gasesOxidationOrganic matterEcology Evolution Behavior and Systematics1172 Environmental sciences0105 earth and related environmental sciences219 Environmental biotechnologyisotoopitgeographyhypoxiaCLIMATEchemistryEnvironmental scienceANAEROBIC METHANE OXIDATION
researchProduct

A spontaneous mitonuclear epistasis converging on Rieske Fe-S protein exacerbates complex III deficiency in mice

2020

We previously observed an unexpected fivefold (35 vs. 200 days) difference in the survival of respiratory chain complex III (CIII) deficient Bcs1lp.S78G mice between two congenic backgrounds. Here, we identify a spontaneous homoplasmic mtDNA variant (m.G14904A, mt-Cybp.D254N), affecting the CIII subunit cytochrome b (MT-CYB), in the background with short survival. We utilize maternal inheritance of mtDNA to confirm this as the causative variant and show that it further decreases the low CIII activity in Bcs1lp.S78G tissues to below survival threshold by 35 days of age. Molecular dynamics simulations predict D254N to restrict the flexibility of MT-CYB ef loop, potentially affecting RISP dyna…

DYNAMICSepistasisMale0301 basic medicineNon-Mendelian inheritanceMitochondrial DiseasesMetabolic disordersRespiratory chainGeneral Physics and AstronomyDISEASEmitokondriotauditElectron Transport Complex IIIMice0302 clinical medicineenergy metabolismCRYSTAL-STRUCTUREIRON-SULFUR PROTEINlcsh:ScienceMice KnockoutGeneticsmitokondrio-DNAMultidisciplinaryCYTOCHROME BC(1) COMPLEXCytochrome bQCytochromes bMitochondria3. Good healthFemaleRESPIRATORY-CHAINGRACILE SYNDROMEhenkiinjääminenOxidation-ReductionMitochondrial DNAMitochondrial diseaseScienceCongenicMolecular Dynamics SimulationBiologyDNA MitochondrialArticleGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesaineenvaihduntahäiriötmedicinemetabolic disordersAnimalsMUTATIONSEpistasis GeneticEnergy metabolismGeneral ChemistryCytochrome b Groupmedicine.diseaseMice Inbred C57BL030104 developmental biologyCoenzyme Q – cytochrome c reductaseEpistasis1182 Biochemistry cell and molecular biologyATPases Associated with Diverse Cellular ActivitiesEpistasislcsh:QGUI MEMBRANE-BUILDERkoe-eläinmallitMetabolism Inborn Errors030217 neurology & neurosurgeryGENERATIONMolecular ChaperonesNature Communications
researchProduct

Tourism in the European economic crisis: Mediatised worldmaking and new tourist imaginaries in Greece

2016

The article interrogates the rationale and origins of changing imaginaries of tourism in Greece in the context of the current economic crisis. We detect a radical change in the ‘picture’ of the country that circulates in global media conduits (YouTube, Facebook, official press websites and personal blogs). We enact a journey into past media representations of Greece as an idyllic peasant and working-class site, but proceed to highlight that such representations are being recycled today by Greeks (especially but not exclusively) living and studying abroad. This stereotype, which focuses on embodied understandings of happiness and well-being, is being challenged by the current economic crisi…

Dark tourismmedia_common.quotation_subject05 social sciences0507 social and economic geographyMedia studiesContext (language use)PeasantEconomyTourism Leisure and Hospitality Management0502 economics and businessHappinessSociologyGreeks050703 geography050212 sport leisure & tourismSlumThe ImaginaryTourismmedia_common
researchProduct

Autovadītāja identifikācija, izmantojot OBD2 datus

2019

Mūsdienās attīstošās datizraces tehnoloģijas un metodes ir radījušas lielu interesi par dažādiem ievāktajiem datiem. Ar 1996. g. ASV un 2003. g. ES, visiem šajās teritorijas tirgotajiem transportlīdzekļiem jābūt aprīkotiem ar OBD2, kas ir sensoru datu apstrādes standarts. Iepriekš veiktie pētījumi ir pierādījuši, ka ir iespējams no šiem datiem identificēt braucēju, ja tie tiek vākti strikti kontrolētos eksperimentos ar noteiktiem maršrutiem un braukšanas laikiem. Šajā darbā tika apskatīts, vai ir iespējams identificēt braucēju no maza sensoru skaita OBD2 datiem, kas ir ievākti no 8 autobraucējiem vadot vienu transportlīdzekli dažādos apstākļos. Datu klasifikācijai tika izmantota programma W…

Datorzinātneu-shapeletOBD2laika rindasdatizraceutovadītāja identifikācija
researchProduct