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showing 10 items of 8335 documents

Multilocus sequence typing analysis of Italian Xanthomonas campestris pv. campestris strains suggests the evolution of local endemic populations of t…

2019

Xanthomonas campestris pv. campestris (Xcc) is the causal agent of black rot in Brassicaceae. It is widespread in Italy and severe outbreaks occur under conditions that favour disease development. In this study a multilocus sequence typing approach (MLST) based on the partial sequence of seven loci was applied to a selection of strains representative of the main areas of cultivation and hosts. The aim was to investigate whether the long tradition of brassica crops in Italy has influenced the evolution of different Xcc populations. All loci were polymorphic; 14 allelic profiles were identified of which 13 were unique to Italian strains. Based on the seven loci, the most common genotype withi…

0106 biological sciences0301 basic medicinePlant ScienceBiologyHorticulture01 natural sciencesXanthomonas campestris pv. campestris03 medical and health sciencesRace (biology)PhylogeneticsGenotypeGeneticsrace designationXanthomonas campestris pv. campestrisEndemismPathogenGeneticspopulation diversityblack rot of Brassicaceae MLST population diversity race designation Xanthomonas campestris pv. campestris Agronomy and Crop Science Genetics Plant Science HorticultureBlack rot of Brassicaeae Xanthomonas campestris pv. campestris MLST race designation population diversity.Outbreakbiology.organism_classificationBlack rot of Brassicaeae030104 developmental biologyMultilocus sequence typingblack rot of BrassicaceaeAgronomy and Crop ScienceXanthomonas campestris pv. campestri010606 plant biology & botanyMLST
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Prebiotic effect of xylooligosaccharides produced from birchwood xylan by a novel fungal GH11 xylanase.

2017

34 p.-4 fig.-1 tab.

0106 biological sciences0301 basic medicineSCFAsBreast-fedStaphylococcus hominisMicroorganismmedicine.medical_treatmentOligosaccharidesXyloseBiologyXylosidase01 natural sciencesAnalytical Chemistry03 medical and health scienceschemistry.chemical_compound010608 biotechnologyXylobiosemedicineGlycoside hydrolaseEndo-14-beta XylanasesPrebioticHydrolysisGeneral MedicineXylanLactic acid030104 developmental biologyPrebioticschemistryBiochemistryTalaromycesXOSXylanaseXylansMicrobiomeBifidobacteriumFood ScienceFood chemistry
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Production of rosmarinic acid and salvianolic acid B from callus culture of Salvia miltiorrhiza with cytotoxicity towards acute lymphoblastic leukemi…

2016

Salvia miltiorrhiza (SM) Bunge is one of the widely-used Chinese medicinal herbs. In this study, the chemical constituents and anticancer potential of SM stems and leaves were examined with those of respective callus cultures. The callus culture for stem and leaf explants was initiated in modified Murashige and Skoog (MS) medium. Active constituents of respective extracts were analyzed by high performance liquid chromatography coupled with DAD and MS (HPLC-DAD-MS). Rosmarinic acid (RA) and salvianolic acid B (Sal B) were determined to be the main phenolic compounds. Quantitative analyses revealed that callus stem extracts produced higher amount of RA and Sal B (stem RA: 1.27±0.38%; stem Sal…

0106 biological sciences0301 basic medicineSalvia miltiorrhizaBiology01 natural sciencesHigh-performance liquid chromatographySalvia miltiorrhizaDepsidesAnalytical Chemistry03 medical and health scienceschemistry.chemical_compoundCytotoxicityIC50Chromatography High Pressure LiquidBenzofuransTraditional medicinePlant ExtractsRosmarinic acidfungifood and beveragesGeneral MedicinePrecursor Cell Lymphoblastic Leukemia-LymphomaIn vitroPlant Leaves030104 developmental biologyBiochemistrychemistryCinnamatesCallus010606 plant biology & botanyFood ScienceExplant cultureDrugs Chinese HerbalFood chemistry
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The Pseudomonas fluorescens Siderophore Pyoverdine Weakens Arabidopsis thaliana Defense in Favor of Growth in Iron-Deficient Conditions

2016

SPE EA BIOME IPM UB INRA; International audience; Pyoverdines are siderophores synthesized by fluorescent Pseudomonas spp. Under iron-limiting conditions, these high-affinity ferric iron chelators are excreted by bacteria in the soil to acquire iron. Pyoverdines produced by beneficial Pseudomonas spp. ameliorate plant growth. Here, we investigate the physiological incidence and mode of action of pyoverdine from Pseudomonas fluorescens C7R12 on Arabidopsis (Arabidopsis thaliana) plants grown under iron-sufficient or iron-deficient conditions. Pyoverdine was provided to the medium in its iron-free structure (apo-pyoverdine), thus mimicking a situation in which it is produced by bacteria. Rema…

0106 biological sciences0301 basic medicineSiderophoreAgronomieFMN ReductasePhysiologyIronArabidopsis[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil study[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/AgronomySiderophoresPseudomonas fluorescensPlant Science[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyPseudomonas fluorescens01 natural sciencesMicrobiology03 medical and health scienceschemistry.chemical_compoundEthylene[ SDV.SA.AGRO ] Life Sciences [q-bio]/Agricultural sciences/AgronomyGene Expression Regulation PlantArabidopsisGeneticsmedicineArabidopsis thalianaHomeostasisCation Transport Proteins2. Zero hungerPyoverdinebiologyIndoleacetic AcidsArabidopsis ProteinsScience des solsGene Expression ProfilingPseudomonasfood and beveragesArticlesEthylenesbiology.organism_classification030104 developmental biologychemistryFerricSalicylic AcidOligopeptidesBacteria010606 plant biology & botanymedicine.drugAbscisic Acid
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Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
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Exploring species-level taxonomy in the Cryptocephalus flavipes species complex (Coleoptera: Chrysomelidae)

2016

In insects, morphological species identification is often challenging. The discrimination of closely related species may be hampered when only subtle differences in phenotypic characters or a continuum in their variability are present. This is exemplified in the Cryptocephalus flavipes species complex (Coleoptera; Chrysomelidae) where, until now, the species have been discriminated only by the yellow pattern on frons, pronotum, and epipleurae. In the present study, the phylogeny of the C. flavipes species complex was resolved through a multi-locus sequence approach, and the inclusion in the group of the phenotypically similar Cryptocephalus quadripustulatus Gyllenhal, 1813 was evaluated. Su…

0106 biological sciences0301 basic medicineSpecies complexgeometric morphometricZoologyCryptocephalus quadripustulatus010603 evolutionary biology01 natural sciencesnew ISS rRNA PCR primers03 medical and health sciencesNew 18SrRNA PCR primerSpecies levelPhylogeneticsSpecies delimitationLeaf beetleDNA taxonomyEcology Evolution Behavior and SystematicsTaxonomybiologyBiodiversitybiology.organism_classificationCryptocephalus flavipes030104 developmental biologyTaxonspecies deliminationAnimal Science and ZoologyTaxonomy (biology)Leaf beetleZoological Journal of the Linnean Society
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Disentangling structural genomic and behavioural barriers in a sea of connectivity

2019

18 pages, 4 tables, 3 figures.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciences0301 basic medicineSympatryReproductive IsolationChromosomal rearrangementsPopulation010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesBehavioural traitsGeneticsAnimalsGadus14. Life underwaterSelection GeneticAdaptationeducationEcology Evolution Behavior and Systematicseducation.field_of_studySympatric divergencebiologyGenetic DriftHomozygoteGenetic VariationReproductive isolationbiology.organism_classificationSpecial Issue on the Role of Genomic Structural Variants in Adaptation and DiversificationGene flowGenetic divergenceSympatrySpecial Issue: The Role of Genomic Structural Variants in Adaptation and Diversification030104 developmental biologyGadus morhuaSympatric speciationEvolutionary biologyAtlantic codChromosome InversionGenetic FitnessAtlantic cod
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Morphometrics and Cladistics: Measuring Phylogeny in the Sea Urchin Echinocardium

1996

A phylogenetic approach to the study of evolutionary patterns is based on taxic homologies (synapomorphies). In contrast, the recognition of evolutionary processes (namely heterochronies) involves analysis of the entire morphology. Recent developments in geometric morphometry permit analysis of morphological similarities grounded in operational homologies. Such morphometric techniques are explored (1) at the level of evolutionary processes, and (2) as a complement in exploration of phylogenetic relationships. To examplify this, we perform a two-part study of the ontogeny and phylogeny of the spatangoid sea urchin Echinocardium. First, a phylogenetic analysis of ten Recent species in the gen…

0106 biological sciences0301 basic medicineSynapomorphyMorphometricsPhylogenetic treemedia_common.quotation_subjectZoologyBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesEchinocardiumCladistics03 medical and health sciences030104 developmental biologyPhylogenetic PatternPhylogeneticsEvolutionary biologyGeneticsPhyletic gradualismGeneral Agricultural and Biological SciencesEcology Evolution Behavior and Systematicsmedia_commonEvolution
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Tubercle disease (Xanthomonas beticola) and other gall-malformed diseases of sugar beet roots: a review

2016

The sugar beet (Beta vulgaris) is an important plant in agriculture and sugar industry, and it is widely cultivated in European countries. Getting proper raw material of sugar beets (roots) is a problem for agriculture. Some disease symptoms observed on sugar beet roots are atypical tumor-like deformations. The causative agent of these deformations is known in the old literature as Xanthomonas beticola. The disease’s name in Poland is “tuberkuloza” and in the USA it refers to a description of a pocket disease—therefore we may consider those diseases to be the same. The clear description of X. beticola disease can be found in many phytopathological manuals printed in the past and nowadays. S…

0106 biological sciences0301 basic medicinegallbiologyTubercle030106 microbiologySugar industrysugar beetPlant ScienceDiseaseXanthomonas beticolaHorticulturebiology.organism_classification01 natural sciencesToxicology03 medical and health sciencesXanthomonasBotanyGallSugar beetSugarCausal organismAgronomy and Crop Science010606 plant biology & botanyJournal of Plant Diseases and Protection
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Electrochemical detection of nitric oxide in plant cell suspensions

2016

SPE IPM UB; Nitric oxide is a hydrophobic radical acting as a physiological mediator in plants. Because of its unique properties, the detection of NO in plant tissues and cell suspensions remains a challenge. For this purpose, several techniques are used, each having certain advantages and limitations such as interferences with other species, questionable sensitivity, and/or selectivity or ex situ measurement. Here we describe a very attractive approach for tracking NO in plant cell suspensions using a NO-sensitive homemade platinum/iridium-based electrochemical microsensor. This method constitutes the absolute real-time proof of the production of free NO in physiological conditions.

0106 biological sciences0301 basic medicinehome-made electrodeChemistry[SDV]Life Sciences [q-bio]fungichemistry.chemical_elementElectrochemical detectionPlant cellElectrochemistry01 natural sciencesNitric oxide03 medical and health scienceschemistry.chemical_compound030104 developmental biologyChemical engineeringnitric oxideplant cell suspensionselectrochemical detection[SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyIridiumPlatinumSelectivity010606 plant biology & botany
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