Search results for "Hydrogen"

showing 10 items of 4254 documents

Conformational investigation of α,β‐dehydropeptides. XV: N‐acetyl‐α,β‐dehydroamino acid N ′N ′‐dimethylamides: conformational properties from infrare…

2005

The FTIR spectra were analysed in the region of the nu(s)(N-H), AI(C=O) and nu(s)(Calpha=Cbeta) bands for a series of Ac-DeltaXaa-NMe2, where DeltaXaa = DeltaAla, (Z)-DeltaAbu, (Z)-DeltaLeu, (Z)-DeltaPhe and DeltaVal, to determine a predominant solution conformation of these alpha,beta-dehydropeptide-related molecules. Measurements were taken in CCl4, DCM and MeCN solutions. In the same way, spectra of saturated analogues Ac-Xaa-NMe2, where Xaa = Ala, Abu, Leu, Phe and Val, were investigated. To help interpret the spectroscopic results, conformational maps were calculated by the B3LYP/6-31+G** method. Also, the relative energies of all conformers of the dehydro compounds in vacuo as well as…

conformationStereochemistryProtein ConformationαPeptideamide/π(Ph) interactionBiochemistrySpectral linechemistry.chemical_compoundStructural BiologyAmideDrug DiscoverySpectroscopy Fourier Transform InfraredSide chainMoleculeC5 hydrogen bondFourier transform infrared spectroscopysolute/solvent interactionMolecular BiologyConformational isomerismβ‐dehydroamino acidsPharmacologychemistry.chemical_classificationChemistryHydrogen bondOrganic ChemistryGeneral MedicineModels TheoreticalAmidestheoretical IR frequenciesFTIR spectroscopyMolecular Medicinedensity functional theory calculationsPeptidesJournal of Peptide Science
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Crystal structure of (E)-4-methyl-N-{2-[2-(4-nitrobenzylidene)hydrazin-1-yl]-2-oxoethyl}benzenesulfonamideN,N-dimethylformamide monosolvate

2017

The molecule of the title Schiff base compound, C16H16N4O5S·C3H7NO, displays atransconformation with respect to the C=N double bond. The C—N and N—N bonds are relatively short compared to their normal bond lengths, indicating some degree of delocalization in the molecule. The molecule is bent at the S atom, with an S—N—C—C torsion angle of 164.48 (11)°. The dihedral angle between the two aromatic rings is 84.594 (7)°. Intermolecular N—H...O and C —H...O hydrogen bonds connect centrosymmetrically related molecules into dimers forming rings ofR33(11) andR22(10) graph-set motif stacked along theaaxis into a columnar arrangement. The molecular columns are further linked into a three-dimensional…

conformationchemistry.chemical_classificationcrystal structureSchiff baseDouble bondHydrogen bondAromaticityGeneral ChemistryCrystal structureDihedral angle010402 general chemistry010403 inorganic & nuclear chemistryCondensed Matter Physics01 natural sciences0104 chemical sciencesSulfonamidelcsh:ChemistryBond lengthSchiff basechemistry.chemical_compoundCrystallographylcsh:QD1-999chemistryGeneral Materials ScienceC—H...O hydrogen bondActa Crystallographica Section E Crystallographic Communications
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Crystal structure of the tripeptideN-(benzyloxycarbonyl)glycylglycyl-L-norvaline

2015

The title tripeptide, C17H23N3O6, contains a nonproteinogenic C-terminal amino acid residue, norvaline, which is an isomer of the amino acid valine. Norvaline, unlike valine, has an unbranched side chain. The molecule has a Gly–Gly segment which adopts an extended conformation. The norvaline residue also adopts an extended backbone conformation while its side chain has ag+tconformation. In the crystal lattice, N—H...O and O—H...O hydrogen bonds stabilize the packing. Molecules translated along the crystallographicaaxis associate through an N—H...O hydrogen bond. The remaining three hydrogen bonds are between molecules related by a21screw axis.

conformationchemistry.chemical_classificationcrystal structureStereochemistryHydrogen bondGeneral ChemistryTripeptideCrystal structurehydrogen bondingCondensed Matter PhysicsData ReportspeptidenorvalineAmino acidlcsh:Chemistrychemistry.chemical_compoundResidue (chemistry)lcsh:QD1-999chemistryValineSide chainGeneral Materials ScienceNorvalineglycineActa Crystallographica Section E Crystallographic Communications
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Conformational investigation of α,β‐dehydropeptides Part VI. Molecular and crystal structure of benzyloxycarbonylglycyl‐(Z )‐dehydrophenylalanine

1994

The structure of a peptide containing C-terminal dehydrophenylalanine, Z-Gly-(Z)-delta Phe (C19H18N2O5, MW = 354) was determined from single-crystal X-ray diffraction data. Needle-shaped crystals were grown from a 1:1 mixture of methanol-acetone in the monoclinic space group P2(1) with a = 14.717(4), b = 4.941(2), c = 12.073(4) A, beta = 103.72(4) degrees; V = 852.86(8) A3, Z = 2 and Dc = 1.32 g cm-3. The structure was solved by direct methods using SHELXS-86 and refined to a final R-index of 0.032 for 1714 observed reflections. The peptide adopts a conformation folded at the glycine residue, and principal torsion angles are omega 0 = -167.6(2) degrees, phi 1 = -71.8(3) degrees, psi 1 = -31…

conformationdehydropeptidehydrogen bondProtein ConformationChemistryHydrogen bondhelical conformersIntermolecular forceDipeptidesCrystal structuredehydrophenylalanineBiochemistryZ‐Gly‐(Z )‐APheCrystallographyProtein structureX-Ray DiffractionIntramolecular forceSpectroscopy Fourier Transform InfraredX-ray crystallographyMoleculeinfrared spectroscopyX‐ray structure analysisMonoclinic crystal systemInternational Journal of Peptide and Protein Research
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Reactivity of bis(cyclohexylammonium) 4-nitrophenylphosphate with SnMe3 Cl. X-ray structure of 4-NO2 C6 H4 PO4(SnMe3)2·H2 O

2014

The reaction of bis(cyclohexylammonium) 4-nitrophenylphosphate with Me3 SnCl (1:2) under reflux in ethanol yielded the title compound 4-NO2 C6 H4 PO4(SnMe3)2H2 O (1). The X-ray crystallographic analysis achieved on single crystals obtained by slow evaporation at room temperature revealed the formation of an unexpected supramolecular coordination network. The elementary building block can be viewed as two Me3 Sn moieties linked by a bridging 4-nitrophenylphosphate ligand. The two tin atoms are five-coordinated and describe a trans-Me3 SnO2 geometry in a trigonal bipyramidal arrangement. However, the Sn atoms are distinct, exhibiting two different environments. Thus, one is linked to two axia…

coordination-driven self-assemblyHydrogen bondChemistryStereochemistryIntermolecular forceMetals and AlloysSupramolecular chemistryX-raychemistry.chemical_elementGeneral Chemistryhydrogen bondingCondensed Matter PhysicsChemistryCrystallographyX-ray crystallographyAtomtrimethyltin(iv) 4-nitrophenylphosphatoMaterials ChemistryMoleculeTinQD1-999x-ray crystallographyMain Group Metal Chemistry
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Fecal Calprotectin in Self-Reported Milk Intolerance: Not Only Lactose Intolerance

2023

The hypothesis is that inflammatory/allergic conditions should be considered in self-reported milk intolerance (SRMI) patients who test negative and/or are asymptomatic at Lactose Hydrogen Breath Test (LHBT). We analyzed fecal calprotectin (FCP) values in SRMI patients to investigate the frequency of a “positive” intestinal inflammation marker and its correlation with lactose tolerance/intolerance. Data from 329 SRMI patients were retrospectively analyzed; according to the positive/negative results (maldigester/digester) and the presence/absence of symptoms reported during LHBT (intolerant/tolerant), patients were divided into: ‘lactose tolerants’ (n. 104), ‘ma…

cow’s milk proteins allergylactose intolerancelactose hydrogen breath testSettore MED/09 - Medicina InternaNutrition and DieteticsLHBTmilk intoleranceSRMIfecal calprotectinLHBT SRMI cow’s milk proteins allergy fecal calprotectin lactose hydrogen breath test lactose intolerance milk intoleranceFood ScienceNutrients
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The subtle balance of weak supramolecular interactions: The hierarchy of halogen and hydrogen bonds in haloanilinium and halopyridinium salts

2010

The series of haloanilinium and halopyridinium salts: 4-IPhNH₃Cl (1), 4-IPhNH₃Br (5), 4-IPhNH₃H₂PO₄ (6), 4-ClPhNH₃H₂PO₄ (8), 3-IPyBnCl (9), 3-IPyHCl (10) and 3-IPyH-5NIPA (3-iodopyridinium 5-nitroisophthalate, 13), where hydrogen or/and halogen bonding represents the most relevant non-covalent interactions, has been prepared and characterized by single crystal X-ray diffraction. This series was further complemented by extracting some relevant crystal structures: 4-BrPhNH3Cl (2, CCDC ref. code TAWRAL), 4-ClPhNH3Cl (3, CURGOL), 4-FPhNH3Cl (4, ANLCLA), 4-BrPhNH3H2PO4, (7, UGISEI), 3-BrPyHCl, (11, CIHBAX) and 3-ClPyHCl, (12, VOQMUJ) from Cambridge Structural Database for sake of comparison. Bas…

crystal engineeringhalogen bondingweak interactionshydrogen bondingsupramolecular chemistry
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4-Chloronaphthalen-1-yl 4-methylbenzenesulfonate

2018

In the title compound, C17H13ClO3S, the naphthalene ring system and the benzene ring of the tosylate substituent are inclined to one another by 55.32 (5)°. The crystal structure features weak intermolecular C—H...O hydrogen bonds, one of which forms inversion dimers. Additional C—H...O hydrogen bonds and weak Cl...Cl halogen bonds stack the molecules along the b-axis direction.

crystal structure010405 organic chemistryChemistryHydrogen bondSubstituentGeneral MedicineCrystal structure010402 general chemistryRing (chemistry)01 natural sciencesMedicinal chemistryCoupling reactioncrosscoupling reactions0104 chemical scienceschemistry.chemical_compoundSulfonatecross-coupling reactionsHalogenlcsh:QD901-999lcsh:CrystallographyPhysics::Chemical PhysicsBenzenetosylatesIUCrData
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3,5-Dimethoxyphenyl 4-methylbenzenesulfonate

2017

Molecules of the title compound, C15H16O5S, are composed of a 3,5-dimethoxyphenyl moiety substituted with a toluene-4-sulfonate group. The dihedral angle between two aromatic rings is 57.23 (4)°. In the crystal, molecules are connected by weak C—H...O hydrogen bonds and S...O van der Waals interactions.

crystal structure010405 organic chemistryHydrogen bondStereochemistryChemistryAromaticityCrystal structuretosyl­atesDihedral angle010403 inorganic & nuclear chemistry01 natural sciencesMedicinal chemistryCoupling reaction0104 chemical sciencessymbols.namesakechemistry.chemical_compoundSulfonatecross-coupling reactionssymbolsMoietyvan der Waals forceIUCrData
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Crystal structure of 3-(tri-phenyl-phosphoranyl-idene)-2,5-di-hydro-furan-2,5-dione tetra-hydro-furan monosolvate.

2018

The title pseudo-polymorph of 3-(triphenylphosphoranylidene)-2,5-dihydrofuran-2,5-dione crystallizes with a tetrahydrofuran solvent molecule, viz. C22H17O3P·C4H8O. The succinic anhydride ring is approximately planar (r.m.s. deviation = 0.032 Å). The tetrahydrofuran molecule is disordered over two orientations about a pseudo-twofold axis with refined occupancy ratio 0.718 (4):0.282 (4). In the crystal, C—H...O hydrogen bonds link molecules of the dihydrofuran-2,5-dione derivative into chains parallel to the b axis and arranged into layers stacked along [100] alternating with hydrogen-bonded tetrahydrofuran layers.

crystal structure02 engineering and technologyCrystal structure010403 inorganic & nuclear chemistryRing (chemistry)01 natural sciencesCrystalchemistry.chemical_compoundFuranpseudopolymorphGeneral Materials ScienceCrystallographybiologytetrahydrofuran solvateHydrogen bondSuccinic anhydrideGeneral Chemistry021001 nanoscience & nanotechnologyCondensed Matter Physicsbiology.organism_classification0104 chemical sciencesCrystallographychemistryQD901-999Tetra0210 nano-technologyylidDerivative (chemistry)Acta crystallographica. Section E, Crystallographic communications
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