Search results for "Hydrogen"

showing 10 items of 4254 documents

Substituent effects in nitro derivatives of carbazoles investigated by comparison of low-temperature crystallographic studies with density functional…

2014

The crystal structure of 9H-carbazole, C12H9N, (I), has been redetermined at low temperature for use as a reference structure in a comparative study with the structures of 1-nitro-9H-carbazole, C12H8N2O2, (II), and 9-nitrocarbazole, C12H8N2O2, (III). The molecule of (I) has crystallographically imposed mirror symmetry (Z′ = 0.5). All three solid-state structures are slightly nonplanar, the dihedral angles between the planes of the arene and pyrrole rings ranging from 0.40 (7)° in (III) to 1.82 (18)° in (II). Nevertheless, a density functional theory (DFT) study predicts completely planar conformations for the isolated molecules. To estimate the influence of nitro-group substitution on aroma…

crystal structuremolecular electronicsSubstituentStackingElectronsbiological activityCrystal structureDihedral angleCrystallography X-RayDFT calculationsInorganic Chemistrychemistry.chemical_compoundDelocalized electronHOMA indexMaterials ChemistryPhysical and Theoretical ChemistryMolecular StructureHydrogen bondTemperatureHydrogen BondingAromaticityNitro CompoundsCondensed Matter PhysicsCrystallographycarbazoleselectron-withdrawing effectschemistryQuantum TheoryDensity functional theoryActa Crystallographica Section C-Structural Chemistry
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Crystal structure and absolute configuration of (4S,5R,6S)-4,5,6-trihydroxy-3-methylcyclohex-2-enone (gabosine H)

2017

The absolute configuration of the title compound, determined as 4S,5R,6S on the basis of the synthetic pathway, was confirmed by single-crystal X-ray diffraction. The mol­ecule is formed by a substituted six-membered cyclo­hexene ring adopting an envelope conformation and substituted by carbonyl, methyl and hydroxyl groups. The supra­molecular structure is mainly built by a combination of O—H⋯O and weaker C—H⋯O hydrogen bonds.

crystal structurenatural productStereochemistryCrystal structure010402 general chemistry010403 inorganic & nuclear chemistry01 natural sciencesResearch Communicationschemistry.chemical_compoundChain (algebraic topology)Screw axisPerpendicularGeneral Materials ScienceEnvelope (waves)CrystallographyChemistryHydrogen bondAbsolute configurationGeneral ChemistryMitsunobu inversion reactionCondensed Matter Physics0104 chemical sciencesabsolute configurationCrystallographyQD901-999EnoneActa Crystallographica Section E Crystallographic Communications
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Crystal structure of (2R*,3aR*)-2-phenylsulfonyl-2,3,3a,4,5,6-hexahydropyrrolo[1,2-b]isoxazole

2017

The title compound, C12H15NO3S, was prepared by 1,3-dipolar cycloaddition of 3,4-dihydro-2H-pyrrole 1-oxide and phenyl vinyl sulfone. In the molecule, both fused five-membered rings display a twisted conformation. In the crystal, C—H...O hydrogen bonds link neighbouring molecules, forming chains running parallel to thebaxis.

crystal structurenitronesStereochemistryCrystal structure010402 general chemistry01 natural sciencesCrystalchemistry.chemical_compoundisoxazolidinesGeneral Materials ScienceIsoxazolesulfonesSulfonylchemistry.chemical_classificationCrystallography010405 organic chemistryChemistryHydrogen bondGeneral ChemistryPhenyl vinyl sulfoneCondensed Matter PhysicsHEXA0104 chemical sciencesCrystallographyQD901-999hydrogen bondsActa Crystallographica Section E: Crystallographic Communications
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Crystal structure of bis-(allyl-ammonium) oxalate.

2014

The title salt, 2C3H8N+·C2O42−, crystallized with six independent allylammonium cations and three independent oxalate dianions in the asymmetric unit. One of the oxalate dianions is nearly planar [dihedral angle between CO2planes = 1.91 (19)°], while the other two are twisted with angles of 11.3 (3) and 26.09 (13)°. One cation has a synperiplanar (cis) conformation with an N—C—C—C torsion angle of 0.9 (3)°, whereas the five remaining cations are characterized bygauchearrangements, with the N—C—C—C torsion angles ranging from 115.9 (12) to 128.8 (3)°. One of the allylammonium cations is positionally disordered (fixed occupancy ratio = 0.45:0.55). In the crystal, the cations and anions are co…

crystal structureoxalateallylammoniumHydrogen bondGeneral ChemistryCrystal structureAmmonium oxalateDihedral angleCondensed Matter PhysicsBioinformaticshydrogen bondingOxalateData ReportsDicationlcsh:Chemistrychemistry.chemical_compoundCrystallographydicationchemistrylcsh:QD1-999allyl­ammoniumGeneral Materials ScienceActa crystallographica. Section E, Structure reports online
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5-Acetyl-6-methyl-4-phenyl-1-(prop-2-ynyl)-3,4-dihydropyrimidin-2(1H)-one

2017

The 4-dihydropyrimidin-2(1H)-one moiety of the title molecule, C16H16N2O2, displays a half-chair conformation. The least-squares mean plane through this heterocycle is almost perpendicular to the aromatic ring [dihedral angle = 89.52 (8)°] and to the prop-2-ynyl chain [C—C—N—C torsion angle of −73.2 (2)°]. The mean plane through the acetyl group makes a dihedral angle of 30.93 (10)° with the mean plane of the heterocycle. There is an intramolecular C—H...O hydrogen bond forming anS(6) ring motif. In the crystal, molecules are linked by pairs of N—H...O hydrogen bonds forming inversion dimers.

crystal structurephenyl010405 organic chemistryChemistryHydrogen bondPlane (geometry)PropynylCrystal structureDihedral angle010402 general chemistryRing (chemistry)acetyl01 natural sciences0104 chemical scienceschemistry.chemical_compoundCrystallography4-dihydropyrimidin-2(1H)-onehydrogen bondslcsh:QD901-999PerpendicularMoietylcsh:CrystallographypropynylIUCrData
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1,1-Diphenyl-4-(thiophen-2-yl)but-3-yn-1-ol

2018

The asymmetric unit of the title homopropargyl alcohol, C20H16OS, contains two independent molecules comprising a hydroxy group, a 3-(2-thiophenyl)- propargylic moiety and two aromatic rings linked to a central carbon atom. The two unique molecules are linked into a dimer by an O—HO hydrogen bond. In one molecule, the thiophene ring is disordered over two orientations rotated by 180 with a refined occupancy ratio of 0.575 (4):0.425 (4). The crystal structure is stabilized by O—H and C—H hydrogen-bond interactions. The crystal studied was a two-component non-merohedral twin, the refined ratio of the twin components being 0.575 (4):0.425 (4). UCR::Vicerrectoría de Docencia::Ciencias Básicas::…

crystal structurepropargylationHomopropargyl alcoholsDimer13-dilithiopropyneCrystal structurealkynes010402 general chemistryRing (chemistry)01 natural sciencesCrystalchemistry.chemical_compoundlcsh:QD901-999MoleculeMoiety010405 organic chemistryHydrogen bondCrystal structurePropargylationAromaticity0104 chemical sciences13-dili­thio­propyneCrystallographychemistryAlkynes540 Químicahomopropargyl alcoholslcsh:Crystallography
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1-{3-[(7-Fluoro-9H-pyrimido[4,5-b]indol-4-yl)(methyl)amino]piperidin-1-yl}propan-1-one

2021

The title compound, C19H22FN5O, has been synthesized as an inhibitor of glycogen synthase kinase-3β. Two molecules interact via two N—H...N hydrogen bonds, forming centrosymmetric dimers.

crystal structurepyrimidoindoleCrystallographybiologykinase inhibitorStereochemistryHydrogen bondMeth-Crystal structurechemistry.chemical_compoundchemistryQD901-999biology.proteinGlycogen synthaseIUCrData
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Crystal structure, spectroscopic characterization and Hirshfeld surface analysis of trans-di­aqua­[2,5-bis­(pyridin-4-yl)-1,3,4-oxa­diazole]di­thio­c…

2019

The NiII atom in the mononuclear title complex has an almost regular octa­hedral N4O2 coordination geometry. In the crystal, the complex mol­ecules are linked in a three-dimensional network through strong O—H⋯N hydrogen bonds.

crystal structurespectroscopyThio-chemistry.chemical_elementcoordination complexCrystal structure010403 inorganic & nuclear chemistry01 natural sciencesCoordination complexResearch CommunicationsCrystalchemistry.chemical_compound134-oxadiazoleGeneral Materials Sciencethio­cyanatechemistry.chemical_classificationthiocyanateCrystallographyThiocyanate010405 organic chemistryHydrogen bondGeneral ChemistryHirshfeld analysisCondensed Matter Physics0104 chemical sciencesCrystallographyNickel134-oxa­diazolechemistryQD901-999hydrogen bondsDiazoleActa Crystallographica Section E: Crystallographic Communications
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Crystal structure of two N′-(1-phenyl­benzyl­idene)-2-(thio­phen-3-yl)acetohydrazides

2019

Two N′-(1-(phenyl­ethyl­idene)-2-(thio­phen-3-yl)acetohydrazides containing –OH and –OCH3 at the para-position of the phenyl ring have been synthesized and their mol­ecular and crystal structures are reported.

crystal structurethiopheneSubstituentThio-Crystal structureDihedral angle010402 general chemistry010403 inorganic & nuclear chemistryRing (chemistry)01 natural sciencesResearch CommunicationsCrystalchemistry.chemical_compoundThiopheneGeneral Materials ScienceHirshield analysisScience & TechnologyCrystallographyHydrogen bondGeneral Chemistrythio­pheneHirshfeld analysisCondensed Matter Physics0104 chemical sciencesCrystallographychemistryQD901-999Physical SciencesacetohydrazidesActa Crystallographica Section E: Crystallographic Communications
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Crystal structure of 5′′-benzylidene-1′-methyl-4′-phenyltrispiro[acenaphthylene-1,2′-pyrrolidine-3′,1′′-cyclohexane-3′′,2′′′-[1,3]dioxane]-2,6′′-dione

2016

In the title tris­piro compound, both the methyl-substituted pyrrolidine and dioxalane rings adopt a twist conformation. The cyclo­penta­none ring of the acenapthylen-1-one system adopts flattened envelope conformation, and the cyclo­hexa­none attached to the dioxalane ring adopts boat conformation. In the crystal, centrosymmetrically related mol­ecules are linked into dimers forming rings of (10) graph-set motif, which are further connected into chains parallel to the b axis by C—H⋯O contacts forming rings of (8) graph-set motif.

crystal structuretrispiropyrrolidinesStereochemistryCyclohexane conformationCrystal structurespiro­cyclo­hexa­nones010402 general chemistryRing (chemistry)01 natural sciencesPyrrolidineResearch Communicationslcsh:ChemistryCrystalchemistry.chemical_compoundacenaphthyleneGeneral Materials SciencedioxalaneEne reaction010405 organic chemistryChemistryHydrogen bondtris­piropyrrolidinesGeneral ChemistryCondensed Matter Physicsace­naphthyl­eneAcenaphthylene0104 chemical scienceslcsh:QD1-999spirocyclohexanonesActa Crystallographica Section E Crystallographic Communications
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