Search results for "IDE"

showing 10 items of 55536 documents

Effect of addition of Opuntia ficus-indica mucilage on the biological leavening, physical, nutritional, antioxidant and sensory aspects of bread

2019

The addition of active compounds to enhance the functional properties of foods is a quite common practice. Recently, bread became one of the target foods to incorporate functional ingredients such as those deriving from Opuntia spp. So far, only Opuntia ficus-indica cladodes in powder has been tested. The addition of fresh O. ficus-indica mucilage (in substitution to water) did not influence the biological leavening of the doughs. The resulting breads showed a biological role of the cactus mucilage, because their antioxidant activity was higher than that of control wheat bread. The sensory analysis indicated a general appreciation of the breads enriched with O. ficus-indica mucilage by the …

0106 biological sciences0301 basic medicineAntioxidantmedicine.medical_treatmentOpuntia ficusBioengineeringAntimicrobial activity01 natural sciencesApplied Microbiology and BiotechnologySensory analysisAntioxidantsCactus mucilage03 medical and health sciencesAntioxidant activityPolysaccharidesYeasts010608 biotechnologymedicineCladodesFood scienceEnriched breadLeavening agentBiological leaveningbiologyPlant Extractsdigestive oral and skin physiologyOpuntiafood and beveragesBreadbiology.organism_classification030104 developmental biologyMucilageCactusDietary antioxidantBiotechnologyJournal of Bioscience and Bioengineering
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Cryptic diversity within three South American whip spider species (Arachnida, Amblypygi)

2020

4 pages; International audience; Cryptic diversity (CD), the presence of highly divergent phylogenetic lineages within closed morphological species, has been documented for many taxa. Great arachnid orders such as Araneae or Scorpiones are well studied and many cases of CD have been described therein; to date, however, related research on smaller arachnid orders, such as whip spiders (Amblypygi), remains lacking. In the current study, we investigated CD based on cytochrome oxidase 1 (COI) in three nominal species of the genus Heterophrynus (H. alces, H. batesii, and H. longicornis), represented by 65 specimens. The sequences were compared using three different methods. All three species sho…

0106 biological sciences0301 basic medicineArachnidZoology[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomySpatial distribution010603 evolutionary biology01 natural sciencesHidden diversity03 medical and health sciencesAmblypygiSpecies SpecificityGenuslcsh:ZoologyAnimalsDNA barcodinglcsh:QL1-991Whip (tree)Letters to the EditorEcology Evolution Behavior and SystematicsPhylogenySpiderEcologyPhylogenetic treebiologyAmazon basin forestGenetic VariationSpidersDNAbiology.organism_classification030104 developmental biologyTaxonAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and EcologyZoological Research
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Ocean acidification at a coastal CO2 vent induces expression of stress-related transcripts and transposable elements in the sea anemone Anemonia viri…

2019

Published version, available at: https://doi.org/10.1371/journal.pone.0210358 Ocean acidification threatens to disrupt interactions between organisms throughout marine ecosystems. The diversity of reef-building organisms decreases as seawater CO2 increases along natural gradients, yet soft-bodied animals, such as sea anemones, are often resilient. We sequenced the polyA-enriched transcriptome of adult sea anemone Anemonia viridis and its dinoflagellate symbiont sampled along a natural CO2 gradient in Italy to assess stress levels in these organisms. We found that about 1.4% of the anemone transcripts, but only ~0.5% of the Symbiodinium sp. transcripts were differentially expressed. Processe…

0106 biological sciences0301 basic medicineAtmospheric ScienceMolecular biologyMarine and Aquatic SciencesGene ExpressionRetrotransposonSea anemone01 natural sciencesAnemoniaSequencing techniquesMobile Genetic ElementsMultidisciplinarybiologyQREukaryotaOcean acidificationAnemoneRNA sequencingGenomicsChemistryRetrotransposonsPhysical SciencesMedicineTranscriptome AnalysisResearch ArticleScienceZoology010603 evolutionary biology03 medical and health sciencesGreenhouse GasesCnidariaGenetic ElementsSea WaterGeneticsVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Environmental ChemistryAnimalsMarine ecosystemBiology and life sciencesEcology and Environmental SciencesDinoflagellateChemical CompoundsOrganismsTransposable ElementsCorrectionAquatic EnvironmentsComputational BiologyCarbon Dioxidebiology.organism_classificationGenome AnalysisMarine EnvironmentsInvertebratesVDP::Mathematics and natural science: 400::Basic biosciences: 470Research and analysis methods:Genetikk og genomikk: 474 VDP::Marinbiologi:497 VDP::Økologi:488 [VDP]030104 developmental biologySea AnemonesMolecular biology techniquesAtmospheric ChemistryEarth SciencesSeawater
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Sexual selection in a wolf spider: Male drumming activity, body size, and viability

1996

Females are often believed to actively choose highly ornamented males (males with extravagant morphological signals or intense sexual display), and ornaments should be honest signals of male viability. However, this belief is relying only on some pieces of empirical evidence from birds. Our study reports active female choice on sexual display that indicates male viability in spiders. We established trials in which we studied female choice in relation to male courtship drumming activity and body size. Females chose the most actively drumming males as mating partners, but the body size of the males did not seem to be selected. Male drumming activity turned out to be a good predictor of male v…

0106 biological sciences0301 basic medicineAttractivenessbiologyEcologyOffspringmedia_common.quotation_subjectWolf spiderBody sizebiology.organism_classification010603 evolutionary biology01 natural sciencesCourtship03 medical and health sciences030104 developmental biologyMate choiceSexual selectionGeneticsMatingGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsDemographymedia_common
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Give me a sample of air and I will tell which species are found from your region : Molecular identification of fungi from airborne spore samples

2017

Fungi are a megadiverse group of organisms, they play major roles in ecosystem functioning and are important for human health, food production and nature conservation. Our knowledge on fungal diversity and fungal ecology is however still very limited, in part because surveying and identifying fungi is time demanding and requires expert knowledge. We present a method that allows anyone to generate a list of fungal species likely to occur in a region of interest, with minimal effort and without requiring taxonomical expertise. The method consists of using a cyclone sampler to acquire fungal spores directly from the air to an Eppendorf tube, and applying DNA barcoding with probabilistic specie…

0106 biological sciences0301 basic medicineBACTERIALBiodiversityAir MicrobiologyDIVERSITYmolecular identificationLANDSCAPE SCALE01 natural sciencesDNA barcodingCOMMUNITY COMPOSITIONekosysteemitTEMPORAL VARIABILITYmolecular biologymolekyylibiologiaFinlandtunnistaminen2. Zero hungeralue-ekologiaOUTDOOR AIREcologySampling (statistics)ReplicateBiodiversitySpores Fungalekosysteemipalvelut1181 Ecology evolutionary biologySeasonsrecognitionsienetecosystemsBiotechnologyregional ecologySample (material)SHORT DISTANCESBiologyspore010603 evolutionary biology03 medical and health sciencesSpecies SpecificityGeneticsDNA Barcoding Taxonomicfungal sampling methodEcosystemEcology Evolution Behavior and SystematicsMolecular identificationWOOD-INHABITING FUNGIFungi15. Life on landatmospheric diversityATMOSPHERESporeekosysteemit (ekologia)fungal diversity030104 developmental biologyfungal survey1182 Biochemistry cell and molecular biologyfungiDISPERSAL LIMITATIONecosystem services
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A Metabarcoding Survey on the Fungal Microbiota Associated to the Olive Fruit Fly.

2017

The occurrence of interaction between insects and fungi is interesting from an ecological point of view, particularly when these interactions involve insect pests and plant pathogens within an agroecosystem. In this study, we aimed to perform an accurate analysis on the fungal microbiota associated to Bactrocera oleae (Rossi) through a metabarcoding approach based on 454 pyrosequencing. From this analysis, we retrieved 43,549 reads that clustered into 128 operational taxonomic units (OTUs), of which 29 resulted in the “core” associate fungi of B. oleae. This fungal community was mainly represented by sooty mould fungi, such as Cladosporium spp., Alternaria spp. and Aureobasidium spp., by pl…

0106 biological sciences0301 basic medicineBactrocera oleaeOlive fruit flySoil ScienceAureobasidium01 natural sciences03 medical and health sciencesMicrobial ecologyPseudocercospora454 PyrosequencingAscomycotaOleaBotanyColletotrichumAnimalsDNA Barcoding TaxonomicPseudocercosporaEcology Evolution Behavior and SystematicsEcological nicheHigh-throughput sequencingEcologybiologyBase SequenceEcologyfungiTephritidaefood and beveragesSettore AGR/12 - Patologia VegetaleAlternariaHigh-Throughput Nucleotide SequencingSequence Analysis DNAbiology.organism_classificationAlternaria030104 developmental biologySettore AGR/11 - Entomologia Generale E ApplicataColletotrichumDNA Intergenic454 Pyrosequencing; Bactrocera oleae; Cladosporium; Colletotrichum; High-throughput sequencing; PseudocercosporaCladosporium010606 plant biology & botanyCladosporiumMycobiomeMicrobial ecology
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Specimens at the Center: An Informatics Workflow and Toolkit for Specimen-level analysis of Public DNA database data

2016

Pham, Kasey K. [et al.]

0106 biological sciences0301 basic medicineBiodiversityPlant ScienceComputational biologyBiology010603 evolutionary biology01 natural sciencesSet (abstract data type)03 medical and health sciencesBotanyDNA databaseGeneticsSupermatrixEcology Evolution Behavior and SystematicsPhylogenetic treePhylogenetic workflowTaxon disparity index (TDI)030104 developmental biologyWorkflowCarexGenBankIdentity (object-oriented programming)CyperaceaeSupermatrixSpecimen-level data
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Interaction Between ABA Signaling and Copper Homeostasis inArabidopsis thaliana

2016

ABA is involved in plant responses to non-optimal environmental conditions, including nutrient availability. Since copper (Cu) is a very important micronutrient, unraveling how ABA affects Cu uptake and distribution is relevant to ensure adequate Cu nutrition in plants subjected to stress conditions. Inversely, knowledge about how the plant nutritional status can interfere with ABA biosynthesis and signaling mechanisms is necessary to optimize stress tolerance in horticultural crops. Here the reciprocal influence between ABA and Cu content was addressed by using knockout mutants and overexpressing transgenic plants of high affinity plasma membrane Cu transporters (pmCOPT) with altered Cu up…

0106 biological sciences0301 basic medicineBiologiaTranscription GeneticPhysiologyMutantArabidopsisPlant ScienceGenetically modified cropsSodium ChlorideGenes PlantPlant Roots01 natural sciencesGene Knockout Techniques03 medical and health scienceschemistry.chemical_compoundGene Expression Regulation PlantStress PhysiologicalArabidopsisHomeostasisArabidopsis thalianaPlantes Cèl·lules i teixitsAbscisic acidTranscription factorbiologyArabidopsis ProteinsMembrane transport proteinorganic chemicalsfungiMembrane Transport Proteinsfood and beveragesCell BiologyGeneral Medicinebiology.organism_classificationCell biologyOxidative StressPhenotype030104 developmental biologychemistryMutationbiology.proteinSignal transductionCopperAbscisic AcidSignal Transduction010606 plant biology & botanyPlant and Cell Physiology
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Biochemical characterization of the skeletal matrix of the massive coral, Porites australiensis - The saccharide moieties and their localization.

2018

11 pages; International audience; To construct calcium carbonate skeletons of sophisticated architecture, scleractinian corals secrete an extracellular skeletal organic matrix (SOM) from aboral ectodermal cells. The SOM, which is composed of proteins, saccharides, and lipids, performs functions critical for skeleton formation. Even though polysaccharides constitute the major component of the SOM, its contribution to coral skeleton formation is poorly understood. To this end, we analyzed the SOM of the massive colonial coral, Porites australiensis, the skeleton of which has drawn great research interest because it records environmental conditions throughout the life of the colony. The coral …

0106 biological sciences0301 basic medicineBiomineralizationGlycanCoralMatrix (biology)Polysaccharide010603 evolutionary biology01 natural sciencesCalcium Carbonate03 medical and health sciencesCalcification PhysiologicSaccharideStructural BiologyMonosaccharideAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsSkeletonchemistry.chemical_classificationbiologySkeletal organic matrixLectinProteinsAnthozoaSkeleton (computer programming)Porites australiensisExtracellular Matrix030104 developmental biologyBiochemistrychemistrybiology.proteinMicroscopy Electron ScanningCoralCrystallizationBiomineralization
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