Search results for "IKK"

showing 10 items of 10819 documents

A molecular-based identification resource for the arthropods of Finland

2022

Publisher Copyright: © 2021 The Authors. Molecular Ecology Resources published by John Wiley & Sons Ltd. To associate specimens identified by molecular characters to other biological knowledge, we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report the creation of a comprehensive reference library of DNA barcodes for the arthropods of an entire country (Finland), (2) publish this library, and (3) deliver a new identification tool for insects and spiders, as based on this resource. The reference library contains mtDNA COI barcodes for 11,275 (43%) of 26,437 arthropod species known from Finland, including 10,811 (45%) of 23,956 insect species. To quantify the…

0106 biological sciencesResource (biology)DNA barcodesspecies identificationBiodiversityreference libraryarthropodsBiologyBarcodeProbabilistic taxonomic assignment010603 evolutionary biology01 natural scienceslaw.inventionCoiCOI03 medical and health sciencessymbols.namesakeProtaxlawprobabilistic taxonomic assignmentniveljalkaisetGeneticsAnimalsDNA Barcoding TaxonomicSpecies identificationArthropodsSpecies identificationFinlandEcology Evolution Behavior and SystematicsGene Library030304 developmental biology0303 health sciencesDNA-analyysiPROTAXsystematiikka (biologia)Linnaean taxonomyReference libraryBiodiversityGeographyEvolutionary biologyDna barcodes1181 Ecology evolutionary biologysymbolsidentificationlajinmääritysIdentification (biology)Biotechnology
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Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea

2020

17 pages, 6 figures, 2 tables, supporting information https://doi.org/10.1002/lno.11601.-- This is the pre-peer reviewed version of the following article: María Teresa Camarena‐Gómez, Clara Ruiz‐González, Jonna Piiparinen, Tobias Lipsewers, Cristina Sobrino, Ramiro Logares, Kristian Spilling, Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea, Limnology and Oceanography 66(1): 255-271 (2021), which has been published in final form at https://doi.org/10.1002/lno.11601. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions

0106 biological sciencesSUCCESSIONLimnologyAquatic ScienceOceanography01 natural sciencesAlgal bloomsuolapitoisuusbakteerit03 medical and health sciencesBACTERIAL PRODUCTIONtaksonomiaPHYTOPLANKTONPhytoplanktonpiilevätDISSOLVED ORGANIC-CARBON14. Life underwaterlajitleväkukinta030304 developmental biology0303 health sciencespanssarilevätPRODUCTIVITYLIMITATIONbiologykoostumus010604 marine biology & hydrobiologyfungiplanktonDinoflagellateVDP::Matematikk og Naturvitenskap: 400BacterioplanktoneliöyhteisötSpring bloomPlanktonVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497mikrolevätbiology.organism_classificationDiatomOceanographyGeography1181 Ecology evolutionary biologyGROWTHPOPULATIONSCRENOTHRIXABUNDANCElämpötilaLimnology and Oceanography
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Restoration of Abundance and Dynamics of Coastal Fish and Lobster Within Northern Marine Protected Areas Across Two Decades

2021

This article reviews a suite of studies conducted in a network of coastal Marine Protected Areas (MPAs) in Skagerrak, Southeast Norway. In 2006, Norway’s first lobster reserves were implemented, with the aim of protecting European lobster (Homarus gammarus) through a ban on fixed gear. A before–after control-impact paired series (BACIPS) monitoring program was initiated to evaluate effects of protection on depleted lobster populations. Experimental trapping and capture-recapture techniques were combined to track demography of populations, also including movement of individuals within and beyond MPAs and adjacent control areas. Further, population genetics and parentage studies were applied,…

0106 biological sciencesScienceCoastal fishOcean EngineeringCrustaceanAquatic ScienceQH1-199.5Oceanography010603 evolutionary biology01 natural sciencesHomarus gammarusFisheries managementVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 47014. Life underwaterSalmoWater Science and TechnologyGlobal and Planetary ChangeFish migrationbiology010604 marine biology & hydrobiologyMarine reserveQEco-evolutionary dynamicsGeneral. Including nature conservation geographical distributionMarine reserveRebuildingbiology.organism_classificationMonitoring programFisherySpilloverGeographyMarine protected areaAcoustic telemetryFisheries managementDisplacement of effort
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Distribution and diversity of fish species along the Sudanese Red Sea coast based on three combined trap and gillnet surveys

2021

Abstract On the western shore of the semi-enclosed coral-reef rich Red Sea, the 850 km coastline of the Red Sea State of the Republic of Sudan provides livelihoods to artisanal fishers, but the present state of the living natural resources and the impact of fisheries are poorly known. To provide a baseline on the biodiversity and fish abundance three fisheries research surveys spanning the entire Sudanese coast were carried out in 2012−13 designed around the seven Sudanese fisheries management areas. Baited traps and gillnets were employed to sample the various reef habitats and fish assemblages from inshore to deeper outer reef archipelagos. The highest species richness, functional diversi…

0106 biological sciencesShoregeographyeducation.field_of_studygeography.geographical_feature_category010604 marine biology & hydrobiologyBaseline (sea)PopulationBiodiversity04 agricultural and veterinary sciencesVDP::Matematikk og Naturvitenskap: 400Aquatic Science01 natural sciencesFishery040102 fisheries0401 agriculture forestry and fisheriesFisheries managementSpecies richnesseducationReefBay
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Integrative taxonomy resolves species identities within the Macrobiotus pallarii complex (Eutardigrada: Macrobiotidae)

2021

AbstractThe taxonomy of many groups of meiofauna is challenging due to their low number of diagnostic morphological characters and their small body size. Therefore, with the advent of molecular techniques that provide a new source of traits, many cryptic species have started to be discovered. Tardigrades are not an exception, and many once thought to be cosmopolitan taxa are being found to be complexes of phenotypically similar species. Macrobiotus pallarii Maucci, 1954 was originally described in South Italy and has been subsequently recorded in Europe, America, and Asia. This allegedly wide geographic range suggests that multiple species may be hidden under this name. Moreover, recently, …

0106 biological sciencesSpecies complexkarhukaisetLineage (evolution)Population010607 zoologyBiology010603 evolutionary biology01 natural sciencesDNA barcodingcryptic taxaDNA barcodingspecies complexeducationnew specieseducation.field_of_studyPhylogenetic treePhylumsystematiikka (biologia)fylogenetiikkaDNAegg ornamentationspecies delimitationTaxonQL1-991Evolutionary biologyDNA-viivakooditlajinmääritysAnimal Science and ZoologyTaxonomy (biology)ZoologyResearch ArticleZoological Letters
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Five centuries of cod catches in Eastern Canada

2021

Abstract The fishery for Northern Atlantic cod (Gadus morhua) off Newfoundland and Labrador, Eastern Canada, presents the most spectacular case of an exploited stock crashed in a few decades by an industrial bottom trawl fishery under a seemingly sophisticated management regime after half a millennium of sustainable fishing. The fishery, which had generated annual catches of 100000 to 200000 tonnes from the beginning of the 16th century to the 1950s,  peaked in 1968 at 810000 tonnes, followed by a devastating collapse and closure 24 years later. Since then, stock recovery may have been hindered by premature openings, with vessels targeting the remains of the cod population. Previous researc…

0106 biological sciencesStock Recoveryeducation.field_of_studyStock assessmentEcologybiology010604 marine biology & hydrobiologyPopulationFishingVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497Aquatic ScienceOceanographybiology.organism_classification010603 evolutionary biology01 natural sciencesFisheryGeographyShifting baselineGadus14. Life underwatereducationAtlantic codEcology Evolution Behavior and SystematicsStock (geology)ICES Journal of Marine Science
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Is it advantageous for Atlantic salmon to be triploid at lower temperatures?

2020

Marine organisms living at low temperatures tend to have larger genomes and larger cells which suggest that these traits can be beneficial in colder environments. In fish, triploidy (three complete sets of chromosomes) can be induced experimentally following fertilization, which provides a model system to investigate the hypothesis that larger cells and genomes offers a physiological advantage at low temperatures. We tested this hypothesis by measuring metabolic rates and swimming performance of diploid and triploid Atlantic salmon (Salmo salar) post smolts acclimated to 3 or 10.5 °C. At 10.5 °C, triploids had significantly lower maximum metabolic rates which resulted in a lower aerobic sco…

0106 biological sciencesStrenuous ActivityPhysiology030310 physiologySalmo salarZoologyModel system010603 evolutionary biology01 natural sciencesBiochemistry03 medical and health sciencesOxygen ConsumptionHuman fertilizationVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470AnimalsSalmoGenome sizeSwimming0303 health sciencesbiologyfungibiology.organism_classificationAdaptation PhysiologicalTriploidyCold TemperatureEctothermMetabolic ratePloidyGeneral Agricultural and Biological SciencesDevelopmental Biology
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Resolving the systematics of Richtersiidae by multilocus phylogeny and an integrative redescription of the nominal species for the genus Crenubiotus …

2020

AbstractThe family Richtersiidae, although established recently with the use of phylogenetic methods, was considered potentially paraphyletic at the time of its erection. Until now, the family comprised four genera, Richtersius, Diaforobiotus, Adorybiotus and a newly erected genus Crenubiotus. However, the genetic characterisation for the latter two genera was very limited or absent. To address concerns about the phylogenetic affinity of these two genera, we present a multilocus phylogeny of the families Richtersiidae and Murrayidae based on four molecular markers (18S rRNA, 28S rRNA, ITS-2 and COI). Our results show a distinct evolutionary lineage composed of Adorybiotus and Crenubiotus, w…

0106 biological sciencesSystematicsParaphylykarhukaisetEvolutionPopulation010607 zoologylcsh:MedicineBiology010603 evolutionary biology01 natural sciencesArticleGenusPhylogeneticsRNA Ribosomal 28SRNA Ribosomal 18STardigradaAnimalseducationlcsh:SciencePhylogenyeducation.field_of_studyMultidisciplinarysystematiikka (biologia)fylogenetiikkalcsh:RType speciesTaxonEvolutionary biologyTaxonomy (biology)lcsh:QZoologyScientific Reports
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Effects of a mobile disturbance pattern on dynamic patch networks and metapopulation persistence

2021

Abstract Motivation Certain early-succession habitats may emerge only at restricted locations following disturbance. Therefore, whether disturbances tend to occur at certain sites or not can significantly affect habitat availability and metapopulation persistence of early-successional habitat specialists. Available models that combine metapopulation and landscape processes do not address how to model mobile, spatially shifting disturbance intensities independent of factors of site suitability. We present a model that allows the study on how a mobile disturbance pattern, of either natural or anthropogenic origin, affects patch network and metapopulation dynamics in realistic, heterogeneous l…

0106 biological sciencesThe false heath fritillaryDisturbance (geology)Metapopulation dynamicsClimate changeHabitat suitability modelsMetapopulationhabitaatti010603 evolutionary biology01 natural sciencesMetapopulation modelsmetapopulaatiotMelitaea diaminaMelitaea diaminabiologyEcology010604 marine biology & hydrobiologyEcological Modelingtummaverkkoperhonen15. Life on landbiology.organism_classificationpopulaatiodynamiikkaHabitat dynamicsHeath fritillaryGeographyHabitatWildlife Ecology and ConservationButterflyPersistence (discontinuity)
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Fiddler crabs and their above-ground sedimentary structures: a review

2020

AbstractFiddler crabs are abundant, semi-terrestrial crustaceans inhabiting tropical, subtropical and warm temperate coasts worldwide. Some species build above-ground sedimentary structures at or near the opening to their burrows. The functions and shapes of these constructions vary interspecifically and according to the sex of the builder. Here, we compile the dispersed reports on these structures, suggest uniform naming for different shapes, review explanations for their functions and explore associations between the attributes of builders and their structures. We found that 47 fiddler crab species build at least one type (or subtype) of structure, including chimneys, hoods, pillars, semi…

0106 biological sciencesVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Etologi: 485biologyEcology010604 marine biology & hydrobiologyEcology (disciplines)Sedimentbiology.organism_classification010603 evolutionary biology01 natural sciencesCrustaceanAttractionFiddler crabSedimentary structuresAnimal ecologyGenusAnimal Science and ZoologyEcology Evolution Behavior and Systematics
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