Search results for "INFORMATICS"
showing 10 items of 2542 documents
Tris(cyclo-hexyl-ammonium) cis-di-chlorido-bis-(oxalato-κ(2) O (1),O (2))stann-ate(IV) chloride monohydrate.
2013
The crystal structure of the title compound, (C6H14N)3[Sn(C2O4)2Cl2]Cl·H2O, contains three cyclohexylammonium cations, one stannate(IV) dianion, one isolated chloride anion and one lattice water molecule. The cyclohexylammonium cations adopt chair conformations. In the complex anion, two bidentate oxalate ligands and two chloride anions incispositions coordinate octahedrally to the central SnIVatom. The cohesion of the molecular entities is ensured by the formation of N—H...O, O—H...O, O—H...Cl and N—H...Cl interactions involving cations, anions and the lattice water molecule, giving rise to a layer-like arrangement parallel to (010).
A helicopter perspective on TB biomarkers: pathway and process based analysis of gene expression data provides new insight into TB pathogenesis.
2013
Biomarker host genetic signatures are considered key tools for improved early diagnosis of tuberculosis (TB) disease (development). The analysis of gene expression changes based on a limited number of genes or single study designs, however, may not be sufficient for the identification of universal diagnostic biomarker profiles. Here we propose that biological pathway and process based analyses from multiple data sets may be more relevant for identification of key pathways in TB pathogenesis, and may reveal novel candidate diagnostic TB biomarkers. A number of independent genome-wide gene expression studies have recently been performed to study expression of biomarkers for TB disease. We hav…
Zebrafish xenografts as a tool for in vivo studies on human cancer
2012
The zebrafish has become a powerful vertebrate model for genetic studies of embryonic development and organogenesis and increasingly for studies in cancer biology. Zebrafish facilitate the performance of reverse and forward genetic approaches, including mutagenesis and small molecule screens. Moreover, several studies report the feasibility of xenotransplanting human cells into zebrafish embryos and adult fish. This model provides a unique opportunity to monitor tumor-induced angiogenesis, invasiveness, and response to a range of treatments in vivo and in real time. Despite the high conservation of gene function between fish and humans, concern remains that potential differences in zebrafis…
JSSPrediction: a Framework to Predict Protein Secondary Structures Using Integration
2006
Identifying protein secondary structures is a difficult task. Recently, a lot of software tools for protein secondary structure prediction have been produced and made available on-line, mostly with good performances. However, prediction tools work correctly for families of proteins, such that users have to know which predictor to use for a given unknown protein. We propose a framework to improve secondary structure prediction by integrating results obtained from a set of available predictors. Our contribution consists in the definition of a two phase approach: (i) select a set of predictors which have good performances with the unknown protein family, and (ii) integrate the prediction resul…
Urinary MicroRNA Profiling Predicts the Development of Microalbuminuria in Patients with Type 1 Diabetes
2015
Microalbuminuria provides the earliest clinical marker of diabetic nephropathy among patients with Type 1 diabetes, yet it lacks sensitivity and specificity for early histological manifestations of disease. In recent years microRNAs have emerged as potential mediators in the pathogenesis of diabetes complications, suggesting a possible role in the diagnosis of early stage disease. We used quantiative polymerase chain reaction (qPCR) to evaluate the expression profile of 723 unique microRNAs in the normoalbuminuric urine of patients who did not develop nephropathy (n = 10) relative to patients who subsequently developed microalbuminuria (n = 17). Eighteen microRNAs were strongly associated w…
European evidence-based recommendations for clinical assessment of upper limb in neurorehabilitation (CAULIN): data synthesis from systematic reviews…
2021
Abstract Background Technology-supported rehabilitation can help alleviate the increasing need for cost-effective rehabilitation of neurological conditions, but use in clinical practice remains limited. Agreement on a core set of reliable, valid and accessible outcome measures to assess rehabilitation outcomes is needed to generate strong evidence about effectiveness of rehabilitation approaches, including technologies. This paper collates and synthesizes a core set from multiple sources; combining existing evidence, clinical practice guidelines and expert consensus into European recommendations for Clinical Assessment of Upper Limb In Neurorehabilitation (CAULIN). Methods Data from systema…
Vairāku sekvenču izlīdzināšanas metožu salīdzinājums
2021
Šajā maģistra darbā paredzēts izpētīt, aprakstīt un salīdzināt dažādas praksē pieejamas vairāku sekvenču izlīdzināšanas metodes. Darbā tiek aprakstīti vairāku sekvenču izlīdzināšanas metožu galvenie pielietojumi bioinformātikā, biežāk sastopamie algoritmi, kuri tiek izmantoti darbā tālāk apskatītajās programmā. Īsi aprakstītas atvērtā koda programmas, kuras industrijā tiek izmantotas visbiežāk. Maģistra darba ietvaros veikts praktisks pētījums par šo metožu priekšrocībām un trūkumiem. Salīdzinājums veikts gan uz reāliem datu masīviem, gan simulētiem, lai spētu pēc iespējas daudzpusīgāk salīdzināt pieejamo programmatūru. Veikta iegūto rezultātu grafiska atspoguļošana un analīze par novērojam…
Peptide classification using optimal and information theoretic syntactic modeling
2010
Accepted version of an article published in the journal: Pattern Recognition. Published version available on Sciverse: http://dx.doi.org/10.1016/j.patcog.2010.05.022 We consider the problem of classifying peptides using the information residing in their syntactic representations. This problem, which has been studied for more than a decade, has typically been investigated using distance-based metrics that involve the edit operations required in the peptide comparisons. In this paper, we shall demonstrate that the Optimal and Information Theoretic (OIT) model of Oommen and Kashyap [22] applicable for syntactic pattern recognition can be used to tackle peptide classification problem. We advoca…
Nursing students' perceptions of a video-based serious game's educational value: A pilot study.
2018
Abstract Background Despite an increasing number of serious games (SGs) in nursing education, few evaluation studies specifically address their educational value in terms of face, content, and construct validity. Objectives To assess nursing students' perceptions of a video-based SG in terms of face, content, and construct validity. In addition, the study assessed perceptions of usability, individual factors, and preferences regarding future use. Design A pilot study was conducted. Setting and Participants An SG prototype was implemented as part of two simulation courses in nursing education: one for home health care and one for hospital medical-surgical wards. The SG aimed to teach clinica…
Spatial representation of vegetation and floristic diversity at landscape scale: the Italian experience
2016
The application of phytosociology to the analysis of vegetation and landscape diversity has greatly developed in Italy during the past 60 years. The analysis of the scientific production of this period is therefore fundamental for a reflection on vegetation mapping and may be useful to forecast future scenarios of this discipline (Bruno et al., 2003). Many different documents related to the plant species distribution and diversity became available over time from different land units of Italy. In particular, interesting examples of mixed floristic and vegetation maps have been produced in a pilot project for the province of Palermo (Sicily) and used in the diagnosis of environmental heteroge…