Search results for "INFORMATICS"

showing 10 items of 2542 documents

Topological structure analysis of chromatin interaction networks.

2019

Abstract Background Current Hi-C technologies for chromosome conformation capture allow to understand a broad spectrum of functional interactions between genome elements. Although significant progress has been made into analysis of Hi-C data to identify biologically significant features, many questions still remain open, in particular regarding potential biological significance of various topological features that are characteristic for chromatin interaction networks. Results It has been previously observed that promoter capture Hi-C (PCHi-C) interaction networks tend to separate easily into well-defined connected components that can be related to certain biological functionality, however, …

Chromatin interaction networksFunctionally related modulesComputer scienceCellStructure (category theory)Topologylcsh:Computer applications to medicine. Medical informaticsBiochemistryGenomeChromosome conformation capture03 medical and health sciences0302 clinical medicineGraph topologyStructural BiologyComponent (UML)medicineHumansGene Regulatory NetworksCell type specificityPromoter Regions GeneticMolecular Biologylcsh:QH301-705.5030304 developmental biologyConnected component0303 health sciencesApplied MathematicsResearchChromatinComputer Science ApplicationsChromatinHematopoiesisIdentification (information)medicine.anatomical_structurelcsh:Biology (General)Gene Expression RegulationTopological graph theorylcsh:R858-859.7DNA microarray030217 neurology & neurosurgeryAlgorithmsBMC bioinformatics
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2021

Introduction: Digital health technologies such as self-monitoring devices and apps are becoming increasingly important as tools to promote healthy habits and support individuals in their self-care. There is still a scarcity of research that builds on motivational theory to better understand the functioning of digital health technologies. The self-determination theory (SDT) is a macro theory of motivation that delineates three basic psychological needs that are linked to different types of motivation and lead to well-being when satisfied and illbeing when frustrated.Objective: To explore how the use of a digital tool for self-monitoring and communication with healthcare satisfies or frustrat…

Chronic care020205 medical informaticsbusiness.industryChronic care managementmedia_common.quotation_subjectApplied psychologyPublic Health Environmental and Occupational Health02 engineering and technologyDigital healthUnit of analysisScarcity03 medical and health sciences0302 clinical medicineUser experience designHealth care0202 electrical engineering electronic engineering information engineering030212 general & internal medicinebusinessPsychologyCompetence (human resources)media_commonFrontiers in Public Health
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2014

article i nfo Objective:Thisstudy (ID:NCT01205906) comparedtheimpact of theworkingalliancebetween the therapistand the client on treatmentoutcome ina group and an Internet-based cognitive behavior therapy (GCBT vs. ICBT) for chronic tinnitus. Methods: The Working Alliance Inventory — Short Revised (WAI-SR, scale range: 1-5) was administered to 26 GCBT and 38 ICBT participants after treatment weeks 2, 5, and 9, and the Tinnitus Handicap Inventory (THI) be- fore and after the treatment. Results: High alliance ratings were found in both ICBT (WAI-SR total scores at week 9:M =3 .59,SD= 0.72) and GCBT (WAI-SRtotal scoresatweek 9: M =4 .20,SD= 0.49), butsignificantlyhigher ratings occurred inGCBT…

Chronic tinnitusHealth InformaticsCognitionlaw.inventionSelf-helpFace-to-faceDistressAllianceRandomized controlled triallawmedicinemedicine.symptomPsychologyTinnitusClinical psychologyInternet Interventions
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Loss of circadian clock gene expression is associated with tumor progression in breast cancer

2014

Several studies suggest a link between circadian rhythm disturbances and tumorigenesis. However, the association between circadian clock genes and prognosis in breast cancer has not been systematically studied. Therefore, we examined the expression of 17 clock components in tumors from 766 node-negative breast cancer patients that were untreated in both neoadjuvant and adjuvant settings. In addition, their association with metastasis-free survival (MFS) and correlation to clinicopathological parameters were investigated. Aiming to estimate functionality of the clockwork, we studied clock gene expression relationships by correlation analysis. Higher expression of several clock genes (e.g., C…

Circadian clockCLOCK ProteinsBreast Neoplasmstumor progressionBiologyBioinformaticsbreast cancerBreast cancerCircadian Clockscircadian clockclock genesmedicineHumansCLOCK Proteinsskin and connective tissue diseasesMolecular BiologyNPAS2metastasis-free survivalCell Biologymedicine.diseaseCLOCKPER2Cancer researchFemaleReportsestrogen receptorDevelopmental BiologyARNTL2PER1Cell Cycle
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Editorial: The Role of the Muscle Secretome in Health and Disease

2020

myokines, exercise, muscle-derived secreted factors, circulating miRNA, extracellular vesicles

Circulating mirnasexerciselcsh:QP1-981Physiologybusiness.industrymyokinesmuscle-derived secreted factors.DiseaseBioinformaticsExtracellular vesicleslcsh:Physiologycirculating miRNAPhysiology (medical)MyokineMedicineextracellular vesiclebusinessextracellular vesiclesmuscle-derived secreted factorsFrontiers in Physiology
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Alterations in Circulating miRNA Levels following Early-Stage Estrogen Receptor-Positive Breast Cancer Resection in Post-Menopausal Women

2014

INTRODUCTION: Circulating microRNAs (miRNAs) exhibit remarkable stability and may serve as biomarkers in several clinical cancer settings. The aim of this study was to investigate changes in the levels of specific circulating miRNA following breast cancer surgery and evaluate whether these alterations were also observed in an independent data set.METHODS: Global miRNA analysis was performed on prospectively collected serum samples from 24 post-menopausal women with estrogen receptor-positive early-stage breast cancer before surgery and 3 weeks after tumor resection using global LNA-based quantitative real-time PCR (qPCR).RESULTS: Numbers of specific miRNAs detected in the samples ranged fro…

Circulating mirnaslcsh:MedicineEstrogen receptorBreast NeoplasmsBioinformaticsBiochemistryBreast cancerSurgical oncologymicroRNABreast TumorsBreast CancermedicineMedicine and Health SciencesBiomarkers TumorHumansPostoperative PeriodStage (cooking)lcsh:Scienceskin and connective tissue diseasesAgedNeoplasm StagingAged 80 and overMultidisciplinarybusiness.industrylcsh:RCarcinoma Ductal BreastCancerBiology and Life SciencesCancers and NeoplasmsMiddle Agedmedicine.diseasePostmenopauseCirculating MicroRNAMicroRNAsOncologyReceptors Estrogenlcsh:QFemalebusinessBiomarkersResearch ArticlePLoS ONE
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Pharmacological Therapy of Non-Alcoholic Fatty Liver Disease: What Drugs Are Available Now and Future Perspectives

2019

The non-alcoholic fatty liver disease (NAFLD) is rapidly becoming the most common cause of chronic liver disease as well as the first cause of liver transplantation. NAFLD is commonly associated with metabolic syndrome (MetS), and this is the most important reason why it is extremely difficult to treat this disease bearing in mind the enormous amount of interrelationships between the liver and other systems in maintaining the metabolic health. The treatment of NAFLD is a key point to prevent NASH progression to advanced fibrosis, to prevent cirrhosis and to prevent the development of its hepatic complications (such as liver decompensation and HCC) and even extrahepatic one. A part of the we…

CirrhosisHealth Toxicology and Mutagenesismedicine.medical_treatmentlcsh:MedicinePhysical exerciseDiseaseReviewLiver transplantationChronic liver diseaseHepatic ComplicationBioinformaticsmetabolic syndrome03 medical and health sciences0302 clinical medicineNon-alcoholic Fatty Liver DiseasemedicineAnimalsHumans030304 developmental biology0303 health sciencesbusiness.industryFatty liverlcsh:RPublic Health Environmental and Occupational Healthnutritional and metabolic diseasesmedicine.diseasedigestive system diseasesmetabolic therapy030211 gastroenterology & hepatologyMetabolic syndromebusinessInternational Journal of Environmental Research and Public Health
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The Evolving Role of Fetuin-A in Nonalcoholic Fatty Liver Disease: An Overview from Liver to the Heart

2021

Nonalcoholic fatty liver disease (NAFLD) is strongly associated to the features of metabolic syndrome which can progress to cirrhosis, liver failure and hepatocellular carcinoma. However, the most common cause of mortality in people with NAFLD is not liver-related but stems from atherosclerotic cardiovascular disease (CVD). The prevalence of NAFLD is on the rise, mainly as a consequence of its close association with two major worldwide epidemics, obesity and type 2 diabetes (T2D). The exact pathogenesis of NAFLD and especially the mechanisms leading to disease progression and CVD have not been completely elucidated. Human fetuin-A (alpha-2-Heremans Schmid glycoprotein), a glycoprotein produ…

Cirrhosisalpha-2-HS-GlycoproteinQH301-705.5030209 endocrinology & metabolismReviewType 2 diabetes030204 cardiovascular system & hematologyBioinformaticsdigestive systemCatalysisInorganic ChemistryPathogenesis03 medical and health sciences0302 clinical medicineInsulin resistanceNon-alcoholic Fatty Liver DiseaseNAFLDNonalcoholic fatty liver diseaseAnimalsHumansMedicineBiology (General)Physical and Theoretical ChemistryQD1-999Molecular BiologyCVD Fetuin‐A NAFLD Animals Cardiovascular Diseases Fibrosis Humans Liver Non-alcoholic Fatty Liver Disease alpha-2-HS-GlycoproteinSpectroscopybusiness.industryOrganic Chemistrynutritional and metabolic diseasesGeneral MedicineCVDmedicine.diseaseFibrosisObesitydigestive system diseasesFetuin-AComputer Science ApplicationsChemistryLiverCardiovascular DiseasesHepatocellular carcinomaMetabolic syndromebusinessInternational Journal of Molecular Sciences
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Effects of seniority, gender and geography on the bibliometric output and collaboration networks of European Research Council (ERC) grant recipients.

2019

Assessing the success and performance of researchers is a difficult task, as their grant output is influenced by a series of factors, including seniority, gender and geographical location of their host institution. In order to assess the effects of these factors, we analysed the publication and citation outputs, using Scopus and Web of Science, and the collaboration networks of European Research Council (ERC) starting (junior) and advanced (senior) grantees. For this study, we used a cohort of 355 grantees from the Life Sciences domain of years 2007-09. While senior grantees had overall greater publication output, junior grantees had a significantly greater pre-post grant award increase in …

Citation analysis ; research grants: peer reviewComputer and Information SciencesBiomedical ResearchDatabases FactualScience PolicyPeer ReviewScienceScopusResearch GrantsBibliometricsResearch and Analysis Methods050905 science studiesResearch FundingDatabase and Informatics MethodsCitation analysis0502 economics and businessCentralityHumansSeniorityDatabase SearchingLocationPublishingMedical educationMultidisciplinarybusiness.industryEuropean researchFinancing Organized05 social sciencesQRGender IdentityResearch AssessmentAuthorshipEuropeBibliometricsPublishingCitation AnalysisMedicine0509 other social sciencesbusinessCitationNetwork Analysis050203 business & managementResearch ArticlePLoS ONE
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2014

The present review discusses the known synthetic routes to the lamellarin alkaloids published until 2014. It begins with syntheses of the structurally simpler type-II lamellarins and then focuses on the larger class of the 5,6-saturated and -unsaturated type-I lamellarins. The syntheses are grouped by the strategy employed for the assembly of the central pyrrole ring.

Class (set theory)Computer scienceStereochemistryDrug DiscoveryPharmaceutical ScienceTotal synthesisRing (chemistry)BioinformaticsPharmacology Toxicology and Pharmaceutics (miscellaneous)Marine Drugs
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