Search results for "IONT"

Diversity and composition of the microbiome associated with eggs of the Southern green stinkbug, Nezara viridula (Hemiptera: Pentatomidae).

2022

Although microbial communities of insects from larval to adult stage have been increasingly investigated in recent years, little is still known about the diversity and composition of egg-associated microbiomes. In this study, we used high-throughput amplicon sequencing and quantitative PCR to get a better understanding of the microbiome of insect eggs and how they are established using the Southern green stinkbug Nezara viridula (L.) (Hemiptera: Pentatomidae) as a study object. First, to determine the bacterial community composition, egg masses from two natural populations in Belgium and Italy were examined. Subsequently, microbial community establishment was assessed by studying stinkbug e…

Lightweight algorithms for constructing and inverting the BWT of string collections

2013

Recent progress in the field of \{DNA\} sequencing motivates us to consider the problem of computing the Burrows‚ÄìWheeler transform (BWT) of a collection of strings. A human genome sequencing experiment might yield a billion or more sequences, each 100 characters in length. Such a dataset can now be generated in just a few days on a single sequencing machine. Many algorithms and data structures for compression and indexing of text have the \{BWT\} at their heart, and it would be of great interest to explore their applications to sequence collections such as these. However, computing the \{BWT\} for 100 billion characters or more of data remains a computational challenge. In this work we ad…

Settling Down: The Genome of Serratia symbiotica from the Aphid Cinara tujafilina Zooms in on the Process of Accommodation to a Cooperative Intracell…

2014

Particularly interesting cases of mutualistic endosymbioses come from the establishment of co-obligate associations of more than one species of endosymbiotic bacteria. Throughout symbiotic accommodation from a free-living bacterium, passing through a facultative stage and ending as an obligate intracellular one, the symbiont experiences massive genomic losses and phenotypic adjustments. Here, we scrutinized the changes in the coevolution of Serratia symbiotica and Buchnera aphidicola endosymbionts in aphids, paying particular attention to the transformations undergone by S. symbiotica to become an obligate endosymbiont. Although it is already known that S. symbiotica is facultative in Acyrt…

A New Multicast Technique for Video Transmission over ABR Services in ATM Networks

2000

Multicast techniques are the only way to simultaneously provide flows of information from one source to several destinations. The intention of this paper is to study and to evaluate different multicast techniques using a video coder based on an adaptive video compression algorithm with subband coding and a best effort network service like ATM with the Available Bit Rate (ABR) service. This video transmission can adapt faster and easily to changing network conditions. In this way, we present an evaluation process for a determined network configuration. Thereafter we discuss the results obtained by simulation and propose for this video transmission a trade-off between these multicast techniqu…

INFLUENZA DELL’ALIMENTO SUI PROTOZOI DI RETICULITERMES LUCIFUGUS (ISOPTERA, RHINOTERMITIDAE)

2009

A New Class of Searchable and Provably Highly Compressible String Transformations

2019

The Burrows-Wheeler Transform is a string transformation that plays a fundamental role for the design of self-indexing compressed data structures. Over the years, researchers have successfully extended this transformation outside the domains of strings. However, efforts to find non-trivial alternatives of the original, now 25 years old, Burrows-Wheeler string transformation have met limited success. In this paper we bring new lymph to this area by introducing a whole new family of transformations that have all the "myriad virtues" of the BWT: they can be computed and inverted in linear time, they produce provably highly compressible strings, and they support linear time pattern search direc…

Bayesian System for Differential Cryptanalysis of DES

2014

AbstractThis paper proposes a new formalization for the differential cryptanalysis of DES (Data Encryption Standard) based on Bayesian Networks (BN), an artificial intelligence framework used for reasoning on data affected by uncertainty. Through the proposed approach it is possible to analyze DES from a novel point of view, thus paving the way for the development of a new class of cryptanalysis methods.

Texture Synthesis for Digital Restoration in the Bit-Plane Representation

2007

In this paper we propose a new approach to handle the problem of restoration of grayscale textured images. The purpose is to recovery missing data of a damaged area. The key point is to decompose an image in its bit-planes, and to process bits rather than pixels. We propose two texture synthesis methods for restoration. The first one is a random generation process, based on the conditional probability of bits in the bit-planes. It is designed for images with stochastic textures. The second one is a best-matching method, running on each bit-plane, that is well suited to synthesize periodic patterns. Results are compared with a state-of-the-art restoration algorithm.

Bluetooth-3G wireless transmission system for neural signal telemetry

2007

In this contribution a wireless transmission system for neural signals is developed. This system includes data compression algorithms at the information source, namely neural signals recorded by micro-electrode arrays. The signals are transmitted over Bluetooth to a mobile device that, without any processing or storing, retransmits it over 3G to a remote server where signal post-processing and analysis is performed. The overall transmission rate of the system is limited by the Bluetooth link between the information source and the mobile phone, as well as by the limited processing capabilities of the mobile device and also by the 3G-link. Data compression allows the transmission of up to 7 n…

Massive presence of insertion sequences in the genome of SOPE, the primary endosymbiont of the rice weevil Sitophilus oryzae

2008

Bacteria that establish an obligate intracellular relationship with eukaryotic hosts undergo an evolutionary genomic reductive process. Recent studies have shown an increase in the number of mobile elements in the first stage of the adaptive process towards intracellular life, although these elements are absent in ancient endosymbionts. Here, the genome of SOPE, the obligate mutualistic endosymbiont of rice weevils, was used as a model to analyze the initial events that occur after symbiotic integration. During the first phases of the SOPE genome project, four different types of insertion sequence (IS) elements, belonging to well-characterized IS families from γ-proteobacteria, were identif…