Search results for "Ligo"

showing 10 items of 1427 documents

HAT1 and HAT2 Proteins Are Components of a Yeast Nuclear Histone Acetyltransferase Enzyme Specific for Free Histone H4

1998

We have analyzed the histone acetyltransferase enzymes obtained from a series of yeast hat1, hat2, and gcn5 single mutants and hat1,hat2 and hat1,gcn5 double mutants. Extracts prepared from both hat1 and hat2 mutant strains specifically lack the following two histone acetyltransferase activities: the well known cytoplasmic type B enzyme and a free histone H4-specific histone acetyltransferase located in the nucleus. The catalytic subunits of both cytoplasmic and nuclear enzymes have identical molecular masses (42 kDa), the same as that of HAT1. However, the cytoplasmic complex has a molecular mass (150 kDa) greater than that of the nuclear complex (110 kDa). The possible functions of HAT1 a…

Saccharomyces cerevisiae ProteinsMolecular Sequence DataSaccharomyces cerevisiaeBiologyBiochemistryCatalysisSubstrate SpecificityHistonesHistone H4Histone H1AcetyltransferasesHistone H2AHistone octamerMolecular BiologyHistone AcetyltransferasesCell NucleusHistone AcetyltransferasesBase SequenceAcetylationCell BiologyHistone acetyltransferaseMolecular WeightPhenotypeOligodeoxyribonucleotidesBiochemistryMutagenesisHistone methyltransferasebiology.proteinHAT1Journal of Biological Chemistry
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Molecular response of Saccharomyces cerevisiae wine and laboratory strains to high sugar stress conditions.

2010

One of the stress conditions that can affect Saccharomyces cerevisiae cells during their growth is osmotic stress. Under particular environments (for instance, during the production of alcoholic beverages) yeasts have to cope with osmotic stress caused by high sugar concentrations. Although the molecular changes and pathways involved in the response to saline or sorbitol stress are widely understood, less is known about how cells respond to high sugar concentrations. In this work we present a comprehensive study of the response to this form of stress which indicates important transcriptomic changes, especially in terms of the genes involved in both stress response and respiration, and the i…

Saccharomyces cerevisiae ProteinsOsmotic shockProteomeMutantSaccharomyces cerevisiaeWineSaccharomyces cerevisiaeBiologyMicrobiologychemistry.chemical_compoundStress PhysiologicalGene Expression Regulation FungalGene expressionPhosphorylationOligonucleotide Array Sequence AnalysisGene Expression ProfilingRNA FungalGeneral Medicinebiology.organism_classificationYeastGlucosechemistryBiochemistryMolecular ResponseProteomeMutationSorbitolMitogen-Activated Protein KinasesFood ScienceInternational journal of food microbiology
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Mannoprotein of the yeast cell wall as primary receptor for the killer toxin of Saccharomyces cerevisiae strain 28.

1987

The killer toxin KT 28 of Saccharomyces cerevisiae strain 28 is primarily bound to the mannoprotein of the cell wall of sensitive yeasts. The mannoprotein of S. cerevisiae X 2180 was purified; gel filtration and SDS-PAGE indicated an estimated Mr of 185,000. The ability to bind killer toxin KT 28 increased during purification of the mannoprotein. Removing the protein part of the mannoprotein by enzymic digestion or removing the alkali-labile oligosaccharide chains by beta-elimination did not destroy the ability to bind killer toxin KT 28. However, binding activity was lost when the 1,6-alpha-linkages of the outer carbohydrate backbone were hydrolysed by acetolysis. The separated oligomannos…

Saccharomyces cerevisiae ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiaeBiologymedicine.disease_causeMicrobiologyChromatography AffinityCell wallSepharoseAffinity chromatographyCell WallmedicineReceptorGlycoproteinschemistry.chemical_classificationMembrane GlycoproteinsToxinOligosaccharideMycotoxinsbiology.organism_classificationChromatography Ion ExchangeYeastKiller Factors Yeastcarbohydrates (lipids)chemistryBiochemistryAdsorptionJournal of general microbiology
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The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors.

2010

In order to study the intragenic profiles of active transcription, we determined the relative levels of active RNA polymerase II present at the 3'- and 5'-ends of 261 yeast genes by run-on. The results obtained indicate that the 3'/5' run-on ratio varies among the genes studied by over 12 log(2) units. This ratio seems to be an intrinsic characteristic of each transcriptional unit and does not significantly correlate with gene length, G + C content or level of expression. The correlation between the 3'/5' RNA polymerase II ratios measured by run-on and those obtained by chromatin immunoprecipitation is poor, although the genes encoding ribosomal proteins present exceptionally low ratios in …

Saccharomyces cerevisiae ProteinsbiologyGeneral transcription factorTranscription GeneticGenes FungalRNA-dependent RNA polymeraseRNA polymerase IISaccharomyces cerevisiaeGene Regulation Chromatin and EpigeneticsMolecular biologyTranscripció genèticaMutationGeneticsRNA polymerase Ibiology.proteinRNATranscription factor II FRNA Polymerase IITranscription factor II DTranscriptional Elongation FactorsTranscription factor II BRNA polymerase II holoenzymeOligonucleotide Array Sequence AnalysisNucleic acids research
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Gravitational-wave parameter inference using Deep Learning

2021

We explore machine learning methods to detect gravitational waves (GW) from binary black hole (BBH) mergers using deep learning (DL) algorithms. The DL networks are trained with gravitational waveforms obtained from BBH mergers with component masses randomly sampled in the range from 5 to 100 solar masses and luminosity distances from 100 Mpc to, at least, 2000 Mpc. The GW signal waveforms are injected in public data from the O2 run of the Advanced LIGO and Advanced Virgo detectors, in time windows that do not coincide with those of known detected signals, and the data from each detector in the Advanced LIGO and Advanced Virgo network is combined into a unique RGB image. We show that a clas…

Science & Technologyspectrogram classificationCiências Naturais::Ciências FísicasComputer scienceGravitational wavebusiness.industryDeep learningDetectorInferenceLIGObayesian neural networksBinary black holeconvolutional neural networksChirpSpectrogramArtificial intelligenceGW astronomybusinessAlgorithm2021 International Conference on Content-Based Multimedia Indexing (CBMI)
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Comprehensive Analysis of Gene Expression Profiles of the Beet Armyworm Spodoptera exigua Larvae Challenged with Bacillus thuringiensis Vip3Aa Toxin

2013

Made available in DSpace on 2014-12-03T13:11:48Z (GMT). No. of bitstreams: 0 Previous issue date: 2013-12-02Bitstream added on 2014-12-03T13:22:24Z : No. of bitstreams: 1 WOS000327944500105.pdf: 2100332 bytes, checksum: 71ea7616e9a7949eed19cff4ce56111f (MD5) Spanish Ministerio de Ciencia e Innovacion European FEDER funds Generalitat Valenciana Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Host-pathogen interactions result in complex relationship, many aspects of which are not completely understood. Vip proteins, which are Bacillus thuringensis (Bt) insecticidal toxins produced during the vegetative stage, are selectively effective against specific insect pests. This ne…

ScienceBacillus thuringiensisSpodopteraSpodopteraBacterial ProteinsBeet armywormBacillus thuringiensisExiguaGene expressionAnimalsMode of actionPest Control BiologicalGeneOligonucleotide Array Sequence AnalysisGeneticsRegulation of gene expressionMultidisciplinarybiologyQfungiRbiology.organism_classificationMolecular biologyLarvaMedicineTranscriptomeResearch ArticlePLoS ONE
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The generation of oligodendroglial cells is preserved in the rostral migratory stream during aging

2013

The subventricular zone (SVZ) is the largest source of newly generated cells in the adult mammalian brain. SVZ-derived neuroblasts migrate via the rostral migratory stream (RMS) to the olfactory bulb (OB), where they differentiate into mature neurons. Additionally, a small proportion of SVZ-derived cells contribute to the generation of myelinating oligodendrocytes. The production of new cells in the SVZ decreases during aging, affecting the incorporation of new neurons into the OB. However, the age-related changes that occur across the RMS are not fully understood. In this study we evaluate how aging affects the cellular organization of migrating neuroblast chains, the proliferation, and th…

SenescenceAgingneuroblast migrationRostral migratory streamSubventricular zoneCèl·lulesNeurogenesisRostral migratory streamSubventricular zoneNeuronesBiologylcsh:RC321-57103 medical and health sciencesCellular and Molecular NeuroscienceNeurologia0302 clinical medicineNeuroblastoligodendrogenesisNeuroblast migrationmedicineOriginal Research Articlelcsh:Neurosciences. Biological psychiatry. Neuropsychiatry030304 developmental biology0303 health sciencesNeurogenesisOlfactory BulbOligodendrocyteOlfactory bulbmedicine.anatomical_structurenervous systemNeuroscience030217 neurology & neurosurgeryNeuroscienceFrontiers in Cellular Neuroscience
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Core Oligosaccharide of Plesiomonas shigelloides PCM 2231 (Serotype O17) Lipopolysaccharide — Structural and Serological Analysis

2013

The herein presented complete structure of the core oligosaccharide of lipopolysaccharide (LPS) P. shigelloides Polish Collection of Microorganisms (PCM) 2231 (serotype O17) was investigated by (1)H, (13)C NMR spectroscopy, mass spectrometry, chemical analyses and serological methods. The core oligosaccharide is composed of an undecasaccharide, which represents the second core type identified for P. shigelloides serotype O17 LPS. This structure is similar to that of the core oligosaccharide of P. shigelloides strains 302-73 (serotype O1) and 7-63 (serotype O17) and differs from these only by one sugar residue. Serological screening of 55 strains of P. shigelloides with the use of serum agai…

SerotypeLipopolysaccharidesendotoxinMagnetic Resonance SpectroscopyLipopolysaccharidePharmaceutical ScienceOligosaccharides<i> Plesiomonas shigelloides</i>ArticleMass SpectrometrySerologyMicrobiologycore oligosaccharidechemistry.chemical_compoundlipopolysaccharide; endotoxin; core oligosaccharide; Plesiomonas shigelloidesDrug DiscoveryCarbohydrate ConformationAnimalsBovine serum albuminPharmacology Toxicology and Pharmaceutics (miscellaneous)lcsh:QH301-705.5biologyStrain (chemistry)Core oligosaccharidelipopolysaccharidebiology.organism_classificationPlesiomonas shigelloideschemistrylcsh:Biology (General)Plesiomonas shigelloidesbiology.proteinPlesiomonasCarbohydrate conformationRabbitsMarine Drugs
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Dimethyl disulfide and dimethyl trisulfide: so similar yet so different in evoking biological responses in saprophilous flies

2014

Dimethyl disulfide (DMDS) and dimethyl trisulfide (DMTS) are used by saprophilous insects to locate breeding sites (decaying organic matter), and by brood-site deceptive flowers to attract such insects. However, little is known about the relative importance of these two compounds in eliciting electrophysiological and behavioral responses in the insects. Here, we compared the relative attractiveness of DMDS and DMTS to saprophilous flies in field choice experiments and tested whether potential differences in field responses can be explained by differences in electrophysiological antennal responses to these compounds. Field experiments revealed that the attractiveness of a mixture of these co…

Settore BIO/07 - EcologiaCalliphora vicinaZoologyBiochemistryLuciliachemistry.chemical_compoundCalliphoridaeDMDSvolatile organic compoundsBotanyoligosulfideDimethyl disulfideCalliphoridaeEcology Evolution Behavior and SystematicsDMTSbiologyMuscidaefungibiology.organism_classificationAttractionSettore AGR/11 - Entomologia Generale E ApplicatachemistryMuscidaeSettore BIO/03 - Botanica Ambientale E ApplicataDimethyl trisulfideMusca
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Limnological characterization of 16 lentic water bodies belonging to the territory of the ‘Fundación San Ignacio Del Huinay’, X region de Los Lagos, …

2009

Huinay is a territory covering about 34,000 hectares in the Commune of Hualaihué (Xth region of Chile) and belonging to the San Ignacio del Huinay Foundation (HF). Its location (42° 22´ S; 72° 24´ W) corresponds to the bio-geographical Province of Magallanes and specifi cally to an area which is highly representative of the continental Northern Patagonia. Based on an aerial prospecting conducted during 2008, we identifi ed more than 30 water bodies of different size and morphology, occurring at different heights and in different landscapes. Among these, 16 water bodies were selected to be studied at the end of the summer, in February 2009. In each water body, longitudinal and transversal ba…

Settore BIO/07 - EcologiaChile Limnology oligotrophic systems
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