Search results for "Limpet"

showing 10 items of 46 documents

Keyhole limpet hemocyanin: 9-A CryoEM structure and molecular model of the KLH1 didecamer reveal the interfaces and intricate topology of the 160 fun…

2008

Abstract Hemocyanins are blue copper-containing respiratory proteins in the hemolymph of many arthropods and molluscs. Molluscan hemocyanins are decamers, didecamers, or multidecamers of a 340- to 400-kDa polypeptide subunit containing seven or eight globular functional units (FUs; FU-a to FU-h), each with an oxygen-binding site. The decamers are short 35-nm hollow cylinders, with their lumen narrowed by a collar complex. Our recently published 9-A cryo-electron microscopy/crystal structure hybrid model of a 3.4-MDa cephalopod hemocyanin decamer [Nautilus pompilius hemocyanin (NpH)] revealed the pathway of the seven-FU subunit (340 kDa), 15 types of inter-FU interface, and an asymmetric col…

Models MolecularMolecular modelbiologySequence Homology Amino AcidCryo-electron microscopyProtein subunitmedicine.medical_treatmentCryoelectron MicroscopyMolecular Sequence DataOxygen transportHemocyaninCrystallographyBiopolymersStructural BiologyHemolymphHemocyaninsmedicinebiology.proteinAnimalsProtein quaternary structureAmino Acid SequenceMolecular BiologyKeyhole limpet hemocyaninJournal of molecular biology
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Small-angle X-ray Scattering-based Three-dimensional Reconstruction of the Immunogen KLH1 Reveals Different Oxygen-dependent Conformations

2003

For decades the respiratory protein keyhole limpet hemocyanin (KLH1) from the marine gastropod Megathura crenulata has been used widely as a potent immunostimulant, useful hapten carrier, and valuable agent in the treatment of bladder carcinoma. Although much information on the immunological properties of KLH1 is available, biochemical and structural data are still incomplete. Small-angle x-ray scattering revealed the existence of two conformations, an oxy state being slightly more compact than the deoxy state. Based on small-angle scattering curves, a newly developed Monte Carlo algorithm delivered a surface representation of proteins. The massive changes of the surfaces of reconstructed d…

Models MolecularProtein Conformationmedicine.medical_treatmentMegathura crenulataCrystallography X-RayBiochemistryAllosteric RegulationmedicineAnimalsScattering RadiationMoleculeAntigensMolecular BiologybiologyScatteringSmall-angle X-ray scatteringHemocyaninCell Biologybiology.organism_classificationOxygenRespiratory proteinMicroscopy ElectronCrystallographyMolluscaHemocyaninsbiology.proteinHaptenKeyhole limpet hemocyaninJournal of Biological Chemistry
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The refined structure of functional unit h of keyhole limpet hemocyanin (KLH1-h) reveals disulfide bridges

2011

Hemocyanins are multimeric oxygen-transport proteins in the hemolymph of many arthropods and mollusks. The overall molecular architecture of arthropod and molluscan hemocyanin is very different, although they possess a similar binuclear type 3 copper center to bind oxygen in a side-on conformation. Gastropod hemocyanin is a 35 nm cylindrical didecamer (2 × 10-mer) based on a 400 kDa subunit. The latter is subdivided into eight paralogous “functional units” (FU-a to FU-h), each with an active site. FU-a to FU-f contribute to the cylinder wall, whereas FU-g and FU-h form the internal collar complex. Atomic structures of FU-e and FU-g, and a 9 A cryoEM structure of the 8 MDa didecamer are avai…

Models Molecularchemistry.chemical_classificationbiologyCopper proteinmedicine.medical_treatmentProtein subunitClinical BiochemistryActive siteHemocyaninCell BiologyBiochemistryAmino acidCrystallographychemistryHemocyaninsHemolymphGeneticsbiology.proteinmedicineDisulfidesMolecular BiologyKeyhole limpet hemocyaninOxygen bindingIUBMB Life
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High-resolution records of growth temperature and life history of two Nacella limpet species, Tierra del Fuego, Argentina

2020

Stable isotope ratios in patelloid limpets of the genus Patella have been established as proxies for coastal environmental change at sub-monthly resolution along the eastern North Atlantic and Mediterranean Sea. Nacella deaurata (Gmelin, 1791) and N. magellanica (Gmelin, 1791) are common intertidal species of patelloid limpets inhabiting the coast of Tierra del Fuego, Argentina/Chile and are commonly found in Holocene archaeological deposits. Here, we examine oxygen and carbon isotope ratios (δ18Oshell and δ13Cshell, respectively) of modern specimens of N. deaurata and N. magellanica to test the hypotheses that: 1) they form their shells in isotopic equilibrium with ambient water; and 2) pr…

NacellaHistoria y ArqueologíaIntertidal zoneSCLEROCHRONOLOGYOceanographyArqueologíaCiencias de la Tierra y relacionadas con el Medio AmbienteInvestigación ClimatológicaHUMANIDADESMediterranean seaSclerochronologymedicineSOUTH AMERICAEcology Evolution Behavior and SystematicsHoloceneEarth-Surface ProcessesIsotope analysisbiologyTEMPERATURE PROXYLimpetPaleontologySeasonalitybiology.organism_classificationmedicine.diseaseCLIMATEOceanographyOXYGEN AND STABLE CARBON ISOTOPESSHELL MIDDENSGeologyCIENCIAS NATURALES Y EXACTAS
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Topology of the 10 subunits within the decamer of KLH, the hemocyanin of the marine gastropod Megathura crenulata.

2002

Immunoelectron microscopy has been performed using negatively stained immune complexes of keyhole limpet hemocyanin isoform 1 (KLH1) decamers and a functional unit-specific monoclonal antibody anti-KLH1-c1. The antibody links hemocyanin molecules at both the collar and the collarless edge of the decamer, indicating a peripheral localization of functional units c. In isoform 2 (KLH2) the positions of functional units c have been identified with the peanut agglutinin (PNA), which has previously been shown to exclusively bind to KLH2-c. Ferritin linked to PNA was used to visualize labeled molecules electron microscopically. The pattern of labeling also indicates a peripheral localization of th…

Peanut agglutininGene isoformModels MolecularImmunoelectron microscopymedicine.medical_treatmentProtein subunitchemical and pharmacologic phenomenaHemocyaninBiologyMegathura crenulatabiology.organism_classificationCrystallography X-RayMolecular biologyNegative stainMolecular WeightMicroscopy ElectronProtein SubunitsStructural BiologyMolluscaHemocyaninsmedicinebiology.proteinAnimalsProtein Structure QuaternaryKeyhole limpet hemocyaninJournal of structural biology
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Primary structure and unusual carbohydrate moiety of functional unit 2-c of keyhole limpet hemocyanin (KLH)

1999

Abstract The complete amino acid sequence of the Megathura crenulata hemocyanin functional unit KLH2-c was determined by direct sequencing and matrix-assisted laser desorption ionization mass spectrometry of the protein, and of peptides obtained by cleavage with EndoLysC proteinase, chymotrypsin and cyanogen bromide. This is the first complete primary structure of a functional unit c from a gastropod hemocyanin. KLH2-c consists of 420 amino acid residues. Circular dichroism spectra indicated approx. 31% β-sheet and 29% α-helix contents. A multiple sequence alignment with other molluscan hemocyanin functional units revealed average identities between 41 and 49%, but 55% in case of Octopus he…

Peanut agglutininmedicine.medical_treatmentMolecular Sequence DataCarbohydratesBiophysicschemical and pharmacologic phenomenaMegathura crenulataBiochemistrychemistry.chemical_compoundStructural BiologymedicineAnimalsChymotrypsinAmino Acid SequenceRNA MessengerMolecular BiologyPeptide sequenceChromatography High Pressure LiquidbiologyMolecular massCircular DichroismProtein primary structureHemocyaninbiology.organism_classificationMolecular WeightBiochemistrychemistryMolluscaSpectrometry Mass Matrix-Assisted Laser Desorption-IonizationHemocyaninsbiology.proteinElectrophoresis Polyacrylamide GelCyanogen bromideSequence AlignmentKeyhole limpet hemocyaninBiochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology
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Effects of ocean acidification on the shells of four Mediterranean gastropod species near a CO2 seep

2017

Marine CO2seeps allow the study of the long-term effects of elevated pCO2(ocean acidification) on marine invertebrate biomineralization. We investigated the effects of ocean acidification on shell composition and structure in four ecologically important species of Mediterranean gastropods (two limpets, a top-shell snail, and a whelk). Individuals were sampled from three sites near a volcanic CO2seep off Vulcano Island, Italy. The three sites represented ambient (8.15 pH), moderate (8.03 pH) and low (7.73 pH) seawater mean pH. Shell mineralogy, microstructure, and mechanical strength were examined in all four species. We found that the calcite/aragonite ratio could vary and increased signifi…

Settore BIO/07 - Ecologia0106 biological sciences010504 meteorology & atmospheric sciencesMediterraneanAquatic Scienceengineering.materialOceanography01 natural scienceschemistry.chemical_compoundWhelkCO2 seepShellGastropodMineral0105 earth and related environmental sciencesCalcitebiologyOcean acidification010604 marine biology & hydrobiologyLimpetAragoniteOcean acidificationMarine invertebratesbiology.organism_classificationPollutionPetroleum seepOceanographychemistryengineeringSeawaterGeologyMarine Pollution Bulletin
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Variations in cardiac activity and heat shock proteins in congeneric Mediterranean limpets: connection between thermal stress and different zonation

2014

Settore BIO/07 - Ecologialimpet climate change heat shock protein MED
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Mass determination, subunit organization and control of oligomerization states of keyhole limpet hemocyanin (KLH).

1997

Analytical dark-field scanning transmission electron microscopy (STEM) of freeze-dried unstained specimens of keyhole limpet hemocyanin (KLH; from Megathura crenulata, a prosobranch gastropod) gave a molecular mass of 400 kDa for the subunit of KLH1 and of 345 kDa for the subunit of KLH2, which confirms our published values from SDS/PAGE. Within the 400-kDa KLH1 subunit we identified, by limited proteolysis, isolation of fragments and N-terminal sequencing, eight distinct 45-60 kDa functional domains (termed 1a through 1h) and determined their sequential arrangement. The KLH1 domains differ biochemically and immunologically from each other and from the previously characterized seven domains…

TrisMicroscopy Electron Scanning TransmissionProtein subunitPopulationMolecular Sequence DataMegathura crenulataBiochemistrychemistry.chemical_compoundAnimalsAmino Acid SequenceeducationMagnesium ionchemistry.chemical_classificationeducation.field_of_studyBinding SitesbiologyMolecular massAnatomybiology.organism_classificationAmino acidMolecular WeightchemistryBiochemistryMolluscaHemocyaninsbiology.proteinKeyhole limpet hemocyaninEuropean journal of biochemistry
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Keyhole Limpet Hemocyanin Type 2 (KLH2): Detection and Immunolocalization of a Labile Functional Unit h

2000

Keyhole limpet hemocyanin (KLH) is a mixture of two hemocyanin isoforms, termed KLH1 and KLH2. Within KLH1 eight oxygen-binding functional units (FUs), 1-a to 1-h, have been identified, in contrast to KLH2, which was previously thought to be organized in seven FUs (2-a to 2-g). By limited proteolysis of KLH2 subunits, isolation of the polypeptide fragments, and N-terminal sequencing, we have now identified an eighth FU of type h, with a molecular mass of 43 kDa. This is unusually small for a FU h from a gastropodan hemocyanin. It is also shown that KLH2 didecamers can be split into a stable and homogeneous population of decamers by dialysis against 50 mM Tris/HCl, pH 7.5, in the absence of …

Trismedicine.medical_treatmentProteolysisMolecular Sequence DataPopulationMegathura crenulataDivalentStructure-Activity Relationshipchemistry.chemical_compoundStructural BiologyEndopeptidasesmedicineAnimalsProtein IsoformsAmino Acid SequenceMicroscopy ImmunoelectronProtein Structure Quaternaryeducationchemistry.chemical_classificationeducation.field_of_studybiologymedicine.diagnostic_testMolecular massAntibodies MonoclonalHemocyaninbiology.organism_classificationMolecular biologyMolecular WeightchemistryMolluscaHemocyaninsbiology.proteinKeyhole limpet hemocyaninJournal of Structural Biology
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