Search results for "Lineage"

A minimalist macroparasite diversity in the round goby of the Upper Rhine reduced to an exotic acanthocephalan lineage.

2018

AbstractThe round goby, Neogobius melanostomus, is a Ponto-Caspian fish considered as an invasive species in a wide range of aquatic ecosystems. To understand the role that parasites may play in its successful invasion across Western Europe, we investigated the parasitic diversity of the round goby along its invasion corridor, from the Danube to the Upper Rhine rivers, using data from literature and a molecular barcoding approach, respectively. Among 1666 parasites extracted from 179 gobies of the Upper Rhine, all of the 248 parasites barcoded on the c oxidase subunit I gene were identified as Pomphorhynchus laevis. This lack of macroparasite diversity was interpreted as a loss of parasites…

A Revision of Sesuvium (Aizoaceae, Sesuvioideae)

2017

Sesuvium and Cypselea are closely related succulent genera within the Sesuvioideae (Aizoaceae). Since Cypselea is nested in Sesuvium in molecular studies and both genera share traits separating them from other members of the subfamily, we propose to include Cypselea in Sesuvium. Sesuvium (incl. Cypselea) comprises 14 species and is distributed worldwide with centres of diversity in southern Africa and North and Central America. Sesuvium comprises erect to procumbent herbs with opposite leaves that often bear conspicuous sheath-like lateral appendages on the petioles (pseudostipules). These and the many-seeded capsules are diagnostic traits, separating Sesuvium from the closely related gener…

The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

Integrative taxonomy resolves species identities within the Macrobiotus pallarii complex (Eutardigrada: Macrobiotidae)

2021

AbstractThe taxonomy of many groups of meiofauna is challenging due to their low number of diagnostic morphological characters and their small body size. Therefore, with the advent of molecular techniques that provide a new source of traits, many cryptic species have started to be discovered. Tardigrades are not an exception, and many once thought to be cosmopolitan taxa are being found to be complexes of phenotypically similar species. Macrobiotus pallarii Maucci, 1954 was originally described in South Italy and has been subsequently recorded in Europe, America, and Asia. This allegedly wide geographic range suggests that multiple species may be hidden under this name. Moreover, recently, …

Phylogenetic placement of Cailliella praerupticola (Melastomataceae), a rare, monospecific lineage from Guinea, West Africa

2021

The genus Cailliella includes a single species, C. praerupticola, restricted to a sandstone plateau region in Coyah, Dubreka, Forecariah and Kindia Prefectures, Guinea, West Africa. Until its rediscovery in 2016, this species was known only by the type gathering made in 1937. We provide an emended description, photographs of living material, locality and habitat data, and a discussion of its conservation status. We further designate a lectotype for C. praerupticola. On the basis of morphology, Cailliella had been considered an isolated member of the tribe Melastomateae, possibly sister to Melastomastrum. We tested the classification of Cailliella by means of a phylogenetic analysis of C. pr…

Variation in leaf anatomical traits relates to the evolution of C4 photosynthesis in Tribuloideae (Zygophyllaceae)

2019

Abstract Tribuloideae (Zygophyllaceae, Zygophyllales) is a warm-climate clade of mostly creeping herbs with an uncertain number of C4 species from at least two genera, raising the possibility of multiple C4 origins within this lineage. To delineate C3 and C4 distributions within Tribuloideae, we conducted a phylogenetic analysis using four genetic markers from 78 accessions of Tribuloideae. δ13C values from 68 Tribuloideae members detected 42 C4 species in the genera Kallstroemia, Tribulopis and Tribulus, and no C4 in Balanites, Neoluederitzia, and Sisyndite. All Kallstroemia are C4, while Tribulopis and Tribulus include C3 species. Two independent C4 origins are supported, one in Tribulus …

Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation

2021

According to the most recent taxonomical revision, the deep-sea dogfish genus Deania encompasses four species. Three of them, D. calcea, D. profundorum, and D. hystricosa, occur in the North Atlantic. Whilst D. profundorum can be identified by the presence of a subcaudal keel, the other two species are not easily visually distinguished. Uncertainties over identification raises concerns over stock units and whether management plans are adequate. In this study we compared onboard visual identification of Deania specimens, with morphological inspection of skin denticles under stereo microscope and with independent molecular taxonomical assignment using two molecular markers. Particular emphasi…

A nuclear Xdh phylogenetic analysis of yams (Dioscorea: Dioscoreaceae) congruent with plastid trees reveals a new Neotropical lineage

2018

Prox1 Is Required for Oligodendrocyte Cell Identity in Adult Neural Stem Cells of the Subventricular Zone

2016

Abstract Adult neural stem cells with the ability to generate neurons and glia cells are active throughout life in both the dentate gyrus (DG) and the subventricular zone (SVZ). Differentiation of adult neural stem cells is induced by cell fate determinants like the transcription factor Prox1. Evidence has been provided for a function of Prox1 as an inducer of neuronal differentiation within the DG. We now show that within the SVZ Prox1 induces differentiation into oligodendrocytes. Moreover, we find that loss of Prox1 expression in vivo reduces cell migration into the corpus callosum, where the few Prox1 deficient SVZ-derived remaining cells fail to differentiate into oligodendrocytes. Thu…

Solitary Fibrous Tumor of the Vulva: Report of 2 Cases, Including a De Novo Dedifferentiated Solitary Fibrous Tumor Diagnosed After Molecular Demonst…

2018

Solitary fibrous tumor (SFT) is a neoplasm of fibroblastic lineage that has been documented in almost every anatomic location. Vulval SFT is very rare with only 10 cases reported to date. We present 2 additional SFTs located in the vulva, in adult women of 59 and 25 yr of age. The first showed a classic morphology and immunophenotype with uniform and strong STAT6 nuclear expression. The other one was a spindle-cell de novo dedifferentiated SFT with heterogeneous nuclear and cytoplasmic STAT6 staining, which could only be correctly diagnosed after molecular analysis with demonstration of a NAB2-STAT6 gene fusion. This genetic aberration is considered to represent the major pathogenic driver …